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CAN33_12280-T1, CAN33_12280-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12280-T1
Unique NameCAN33_12280-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:56479..58364-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12280-T1 ID=CAN33_12280-T1|Name=CAN33_12280-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1886bp|location=Sequence derived from alignment at NKJJ01000010.1:56479..58364- (Aspergillus niger FDAARGOS_311)
ATGGCCCTTTTACAAACATCCCTTATATGGGCAGTATACGCTATTGTGGT
AGCTGTTCTGGTAATGGTAGCGTCGGTATTCATCTATACTTATCAAACGC
CTCGGGATCGCTCTTCAGTTGTGACGTTCACGTGTATCGTTGCGATTACA
AGCTTACTTGCCACTGTTCTTTTGTTGCCGGTGGATGTTGCTTTAACCTC
TTCTACCACATCCTCGAAGCTTGGCCAAAGGAAACCCTGGGCCACTCAGG
ATGAAGTAGATAAGATTGTTTCTCTATTAACGGCTGTGTACTACCTCCTT
TACTCGCTTGATGCATTCCTGTGCCTACTCGCAATCCCATTTGTCTATTT
CTGGTACGAAGAATATGATGAAGTGGCTGTCGAATCCGGTGAGCAATCTG
CCGCCAAACGACTTTGGACGGCGTTTAAGTACACTATCTCGTTTATTGCG
ATAGTGGTTGTACTTTTCATTGTTGGCTTTCTTGTCCCTGTTGCGAATAT
TAAGGACAGCAAAGTTTCAGACTATCTCAGGAAGCTTCTGGCTGAGAATC
GTAAGATCGCCCTTCGCCTCCCTGCAGCATGTCCCTACTCGCATTCTTTC
AAGATACCCGTTCATAATCCAATGCTAATTGGTTTCCATCTAGGTGGCGA
GAGGGTCCTTACGTTCACCCTTGGGTTATTGATAACAATGGGTCTGTTCC
TTTATATCCTATATACCTCAACGGGCCTTGCTGTTCTTCCCATGAGGATG
ATACGGGCAGCTCCATCTGTGTCAGATATGACCTGGAAGGCGTCGACGAG
TGCACAGCTTGAATCTAATCGAGAGCGTCAGCGCCAGCTGGAAGGTCGCT
GTAGAGGAGATCCGGGTCTTCTCTCTTCTAAGGAACGTAGAGAGCTCGAT
ACCCTCGTTCGAGACGAGAGGACACTTATCAGGCGGCAACGCTTGGCAGA
AGAGGCTGACGGTGAAGGTCAAAGCCGATTTATGAGGGCATGGCTAAAGA
CCACGGCTTTCTTCCGCCCATTAAAGCTGCTAGGCGGCATTGCCATTCTC
TTAATCACACTTATGATTTGGATATCGATGCTCTTGACGGCAATTGACAA
AGCCAAGAATTCTATATGCAAACAGCGTTGCGGATACATACTCAGTGGCA
TTGGGGTTTTCAATCCCATCAACTGGATATTCGTCCAATCGGCCAAGGTA
TTTCCGATTGACTACGCCGTCCTTACAGTAGTTGTCCTGTTGCTATTTGG
CAGTTCAGTGGTCGGGATATCTACCATTGGCATTCGCTTTCTCTGGATTA
GAATATTTCGGGTCAGAAAGGGGCACACGTCTCCACAAGCCCTGCTGCTG
ACCACTGCCATGCTGATGTTGACAATACTAGCATTGGACTATTCGATCCC
CATGCTTGTTGCACCTCAGTACGCGACTTTTGGACCGCAAACATTTTGTG
ATCGCCCCCAGGGCCAGCAATCAGATTGTTTGACTAACAAACACCTGATC
AAGCCATGCTCGGAACTAACAGACAACACGGCTGCCAAGCGAGTCTGCAC
ACCCAGCGTCACTAGTATGTTTCTCAACCGCGTGACGATAAGCTATCCCT
TTTTCGGTACAGTATTTTTCTGGTCCCAATTCATCTTCCTCGGTAAGTGG
GCACCGTCTGTCTTCATAAAAGCTAGTTACAGGCTAATGGGACACAAATT
TCAGTTATCTACTTGCTCGTCTTGGTCACCTCTTTTATCCGCCATCCGAA
ACTTGATGAACGTTTACTGGATCAAGAAGCTGAGGAGGCCGAGGAGGAAC
GGCTACTGACAAGCTCTGCAAGAGGTGTTGGTGACACCTATCAAAGTGTT
GGTGGACGAAACAACTTCTCGACTAGAGCAGGGTAA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:56479..58364-

>CAN33_12280-T1 ID=CAN33_12280-T1|Name=CAN33_12280-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5193bp|location=Sequence derived from alignment at NKJJ01000010.1:56479..58364- (Aspergillus niger FDAARGOS_311)
TTATCTACTTGCTCGTCTTGGTCACCTCTTTTATCCGCCATCCGAAACTT
GATGAACGTTTACTGGATCAAGAAGCTGAGGAGGCCGAGGAGGAACGGCT
ACTGACAAGCTCTGCAAGAGGTGTTGGTGACACCTATCAAAGTGTTGGTG
GACGAAACAACTTCTCGACTAGAGCAGGGTAAGTGGCGAGAGGGTCCTTA
CGTTCACCCTTGGGTTATTGATAACAATGGGTCTGTTCCTTTATATCCTA
TATACCTCAACGGGCCTTGCTGTTCTTCCCATGAGGATGATACGGGCAGC
TCCATCTGTGTCAGATATGACCTGGAAGGCGTCGACGAGTGCACAGCTTG
AATCTAATCGAGAGCGTCAGCGCCAGCTGGAAGGTCGCTGTAGAGGAGAT
CCGGGTCTTCTCTCTTCTAAGGAACGTAGAGAGCTCGATACCCTCGTTCG
AGACGAGAGGACACTTATCAGGCGGCAACGCTTGGCAGAAGAGGCTGACG
GTGAAGGTCAAAGCCGATTTATGAGGGCATGGCTAAAGACCACGGCTTTC
TTCCGCCCATTAAAGCTGCTAGGCGGCATTGCCATTCTCTTAATCACACT
TATGATTTGGATATCGATGCTCTTGACGGCAATTGACAAAGCCAAGAATT
CTATATGCAAACAGCGTTGCGGATACATACTCAGTGGCATTGGGGTTTTC
AATCCCATCAACTGGATATTCGTCCAATCGGCCAAGGTATTTCCGATTGA
CTACGCCGTCCTTACAGTAGTTGTCCTGTTGCTATTTGGCAGTTCAGTGG
TCGGGATATCTACCATTGGCATTCGCTTTCTCTGGATTAGAATATTTCGG
GTCAGAAAGGGGCACACGTCTCCACAAGCCCTGCTGCTGACCACTGCCAT
GCTGATGTTGACAATACTAGCATTGGACTATTCGATCCCCATGCTTGTTG
CACCTCAGTACGCGACTTTTGGACCGCAAACATTTTGTGATCGCCCCCAG
GGCCAGCAATCAGATTGTTTGACTAACAAACACCTGATCAAGCCATGCTC
GGAACTAACAGACAACACGGCTGCCAAGCGAGTCTGCACACCCAGCGTCA
CTAGTATGTTTCTCAACCGCGTGACGATAAGCTATCCCTTTTTCGGTACA
GTATTTTTCTGGTCCCAATTCATCTTCCTCGATGGCCCTTTTACAAACAT
CCCTTATATGGGCAGTATACGCTATTGTGGTAGCTGTTCTGGTAATGGTA
GCGTCGGTATTCATCTATACTTATCAAACGCCTCGGGATCGCTCTTCAGT
TGTGACGTTCACGTGTATCGTTGCGATTACAAGCTTACTTGCCACTGTTC
TTTTGTTGCCGGTGGATGTTGCTTTAACCTCTTCTACCACATCCTCGAAG
CTTGGCCAAAGGAAACCCTGGGCCACTCAGGATGAAGTAGATAAGATTGT
TTCTCTATTAACGGCTGTGTACTACCTCCTTTACTCGCTTGATGCATTCC
TGTGCCTACTCGCAATCCCATTTGTCTATTTCTGGTACGAAGAATATGAT
GAAGTGGCTGTCGAATCCGGTGAGCAATCTGCCGCCAAACGACTTTGGAC
GGCGTTTAAGTACACTATCTCGTTTATTGCGATAGTGGTTGTACTTTTCA
TTGTTGGCTTTCTTGTCCCTGTTGCGAATATTAAGGACAGCAAAGTTTCA
GACTATCTCAGGAAGCTTCTGGCTGAGAATCTTATCTACTTGCTCGTCTT
GGTCACCTCTTTTATCCGCCATCCGAAACTTGATGAACGTTTACTGGATC
AAGAAGCTGAGGAGGCCGAGGAGGAACGGCTACTGACAAGCTCTGCAAGA
GGTGTTGGTGACACCTATCAAAGTGTTGGTGGACGAAACAACTTCTCGAC
TAGAGCAGGGTAAGTGGCGAGAGGGTCCTTACGTTCACCCTTGGGTTATT
GATAACAATGGGTCTGTTCCTTTATATCCTATATACCTCAACGGGCCTTG
CTGTTCTTCCCATGAGGATGATACGGGCAGCTCCATCTGTGTCAGATATG
ACCTGGAAGGCGTCGACGAGTGCACAGCTTGAATCTAATCGAGAGCGTCA
GCGCCAGCTGGAAGGTCGCTGTAGAGGAGATCCGGGTCTTCTCTCTTCTA
AGGAACGTAGAGAGCTCGATACCCTCGTTCGAGACGAGAGGACACTTATC
AGGCGGCAACGCTTGGCAGAAGAGGCTGACGGTGAAGGTCAAAGCCGATT
TATGAGGGCATGGCTAAAGACCACGGCTTTCTTCCGCCCATTAAAGCTGC
TAGGCGGCATTGCCATTCTCTTAATCACACTTATGATTTGGATATCGATG
CTCTTGACGGCAATTGACAAAGCCAAGAATTCTATATGCAAACAGCGTTG
CGGATACATACTCAGTGGCATTGGGGTTTTCAATCCCATCAACTGGATAT
TCGTCCAATCGGCCAAGGTATTTCCGATTGACTACGCCGTCCTTACAGTA
GTTGTCCTGTTGCTATTTGGCAGTTCAGTGGTCGGGATATCTACCATTGG
CATTCGCTTTCTCTGGATTAGAATATTTCGGGTCAGAAAGGGGCACACGT
CTCCACAAGCCCTGCTGCTGACCACTGCCATGCTGATGTTGACAATACTA
GCATTGGACTATTCGATCCCCATGCTTGTTGCACCTCAGTACGCGACTTT
TGGACCGCAAACATTTTGTGATCGCCCCCAGGGCCAGCAATCAGATTGTT
TGACTAACAAACACCTGATCAAGCCATGCTCGGAACTAACAGACAACACG
GCTGCCAAGCGAGTCTGCACACCCAGCGTCACTAGTATGTTTCTCAACCG
CGTGACGATAAGCTATCCCTTTTTCGGTACAGTATTTTTCTGGTCCCAAT
TCATCTTCCTCGATGGCCCTTTTACAAACATCCCTTATATGGGCAGTATA
CGCTATTGTGGTAGCTGTTCTGGTAATGGTAGCGTCGGTATTCATCTATA
CTTATCAAACGCCTCGGGATCGCTCTTCAGTTGTGACGTTCACGTGTATC
GTTGCGATTACAAGCTTACTTGCCACTGTTCTTTTGTTGCCGGTGGATGT
TGCTTTAACCTCTTCTACCACATCCTCGAAGCTTGGCCAAAGGAAACCCT
GGGCCACTCAGGATGAAGTAGATAAGATTGTTTCTCTATTAACGGCTGTG
TACTACCTCCTTTACTCGCTTGATGCATTCCTGTGCCTACTCGCAATCCC
ATTTGTCTATTTCTGGTACGAAGAATATGATGAAGTGGCTGTCGAATCCG
GTGAGCAATCTGCCGCCAAACGACTTTGGACGGCGTTTAAGTACACTATC
TCGTTTATTGCGATAGTGGTTGTACTTTTCATTGTTGGCTTTCTTGTCCC
TGTTGCGAATATTAAGGACAGCAAAGTTTCAGACTATCTCAGGAAGCTTC
TGGCTGAGAATCTTATCTACTTGCTCGTCTTGGTCACCTCTTTTATCCGC
CATCCGAAACTTGATGAACGTTTACTGGATCAAGAAGCTGAGGAGGCCGA
GGAGGAACGGCTACTGACAAGCTCTGCAAGAGGTGTTGGTGACACCTATC
AAAGTGTTGGTGGACGAAACAACTTCTCGACTAGAGCAGGGTAAGTGGCG
AGAGGGTCCTTACGTTCACCCTTGGGTTATTGATAACAATGGGTCTGTTC
CTTTATATCCTATATACCTCAACGGGCCTTGCTGTTCTTCCCATGAGGAT
GATACGGGCAGCTCCATCTGTGTCAGATATGACCTGGAAGGCGTCGACGA
GTGCACAGCTTGAATCTAATCGAGAGCGTCAGCGCCAGCTGGAAGGTCGC
TGTAGAGGAGATCCGGGTCTTCTCTCTTCTAAGGAACGTAGAGAGCTCGA
TACCCTCGTTCGAGACGAGAGGACACTTATCAGGCGGCAACGCTTGGCAG
AAGAGGCTGACGGTGAAGGTCAAAGCCGATTTATGAGGGCATGGCTAAAG
ACCACGGCTTTCTTCCGCCCATTAAAGCTGCTAGGCGGCATTGCCATTCT
CTTAATCACACTTATGATTTGGATATCGATGCTCTTGACGGCAATTGACA
AAGCCAAGAATTCTATATGCAAACAGCGTTGCGGATACATACTCAGTGGC
ATTGGGGTTTTCAATCCCATCAACTGGATATTCGTCCAATCGGCCAAGGT
ATTTCCGATTGACTACGCCGTCCTTACAGTAGTTGTCCTGTTGCTATTTG
GCAGTTCAGTGGTCGGGATATCTACCATTGGCATTCGCTTTCTCTGGATT
AGAATATTTCGGGTCAGAAAGGGGCACACGTCTCCACAAGCCCTGCTGCT
GACCACTGCCATGCTGATGTTGACAATACTAGCATTGGACTATTCGATCC
CCATGCTTGTTGCACCTCAGTACGCGACTTTTGGACCGCAAACATTTTGT
GATCGCCCCCAGGGCCAGCAATCAGATTGTTTGACTAACAAACACCTGAT
CAAGCCATGCTCGGAACTAACAGACAACACGGCTGCCAAGCGAGTCTGCA
CACCCAGCGTCACTAGTATGTTTCTCAACCGCGTGACGATAAGCTATCCC
TTTTTCGGTACAGTATTTTTCTGGTCCCAATTCATCTTCCTCGATGGCCC
TTTTACAAACATCCCTTATATGGGCAGTATACGCTATTGTGGTAGCTGTT
CTGGTAATGGTAGCGTCGGTATTCATCTATACTTATCAAACGCCTCGGGA
TCGCTCTTCAGTTGTGACGTTCACGTGTATCGTTGCGATTACAAGCTTAC
TTGCCACTGTTCTTTTGTTGCCGGTGGATGTTGCTTTAACCTCTTCTACC
ACATCCTCGAAGCTTGGCCAAAGGAAACCCTGGGCCACTCAGGATGAAGT
AGATAAGATTGTTTCTCTATTAACGGCTGTGTACTACCTCCTTTACTCGC
TTGATGCATTCCTGTGCCTACTCGCAATCCCATTTGTCTATTTCTGGTAC
GAAGAATATGATGAAGTGGCTGTCGAATCCGGTGAGCAATCTGCCGCCAA
ACGACTTTGGACGGCGTTTAAGTACACTATCTCGTTTATTGCGATAGTGG
TTGTACTTTTCATTGTTGGCTTTCTTGTCCCTGTTGCGAATATTAAGGAC
AGCAAAGTTTCAGACTATCTCAGGAAGCTTCTGGCTGAGAATC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12280CAN33_12280Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12280-T1CAN33_12280-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12280-T1.cdsCAN33_12280-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12280-T1.exon3CAN33_12280-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_12280-T1.exon2CAN33_12280-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12280-T1.exon1CAN33_12280-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR006876
ProductLMBR1-like membrane protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:56479..58364 -
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