You are here

CAN33_12355-T1, CAN33_12355-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12355-T1
Unique NameCAN33_12355-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:120299..121576+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12355-T1 ID=CAN33_12355-T1|Name=CAN33_12355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1278bp|location=Sequence derived from alignment at NKJJ01000010.1:120299..121576+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCTCCACTGTCTTCCACATCCTCTCTATCCTCTGGGAACACCCC CACCACCGGCCGTCGACGCGCGACCTCGTTATCGGCAAACGATCCAACCG TGATTACTACCGATAGGATTCGTCCCGACTGGGCTCAAAAGCTTGCAAAT GCCCGAGCTCATGCTGCGCGGCGGTCGGCAGCAGCGACTGCCCTTCATAC TGCGGCTTACTTGATGCACTCTAACGGCGCTGGAAATGATTCCCGGATTG GTCTGGGAAGAAGAAGCGTCATGCGGAGAAACGGCGCGCCAGAAGCTCAG AACTCTAGCGCGCGCACCGGATCCCCGGCGCTGCAGGCGCTGGCATTCCT CACGGATAGGCGCGCAGCTGGCCACGAAGCCGACTCGGCGGAAGAAGGGT CCGGTAACATTGCCCCACCTCGTCAGAGCTCGAGGCGGAATCGCATAGAT GATCTGGAAGAAATGATGATGATGGAGGCGATCCGACTCAGTCTAGCGAG CGAGGAAGAGCGGCGCAAGAGAGAGGAGAAAGAGGCCAAGAAAGAGGCAA AGAAAAAGGAGAAGGAAGCCAAGAAGGCAGAAAAGGTTGCGCGCAAAACC GGGCTCACCAGTAACAATGCGAGCAGCTCCGCCTTGGATGTGCTTCCGGA TGCGCGGCTAGGTAGGGTCACGAGCAGTTCCTCTTCCATTGCGGCTGAGG AGGTTGTATCGGCCGGCAAGGGTAAGGAGGTAGACCGTTCTGTACCAGCT GGTGGCTCTGCTGCTGAACCCAGTACTGCGGCCGAGGAAGTGCAGCCCGC GGCGGCATCGGCAAGCCCGGCCGATCAAGCGCCGAGTATGTCACCTCCAA CGATTGTCCAATCGTCGTCCAAAGATGTCACGAGGCCTTCGCATCTTCGG CATGTTTCTAGTGCATCGTCATCGTTCTCCTCGCTGGTCGAATCGATGTC GGAAGATCATGCGGGCTCCGCGGAGGGAGCAGGCTCCTTTGCAGAGCCCC TTTACAATTTCCGCAGTCTGGCAGCCGTGATTGGAGATGAAGAGAAGGGC GACGAGGCACCCGAGCATGTTGAAGAGACCTCGTCCAAGCCGAATGTGGA GGGGTCAGCCTCGCAGTCCGTTCAGCCGGTGGCAGAGGCATCGGTTGCTG AACCCGCGACTACCACTGAGGCCAAGGTACCGATGGAGGAGCAGCGCGAC AATTTGATACCGAAAGAGCTGGAGACCCAATCCGTCGAAATTACAGGTAC CACACATGATACGGAAGCGACGTCCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:120299..121576+

>CAN33_12355-T1 ID=CAN33_12355-T1|Name=CAN33_12355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1278bp|location=Sequence derived from alignment at NKJJ01000010.1:120299..121576+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCTCCACTGTCTTCCACATCCTCTCTATCCTCTGGGAACACCCC
CACCACCGGCCGTCGACGCGCGACCTCGTTATCGGCAAACGATCCAACCG
TGATTACTACCGATAGGATTCGTCCCGACTGGGCTCAAAAGCTTGCAAAT
GCCCGAGCTCATGCTGCGCGGCGGTCGGCAGCAGCGACTGCCCTTCATAC
TGCGGCTTACTTGATGCACTCTAACGGCGCTGGAAATGATTCCCGGATTG
GTCTGGGAAGAAGAAGCGTCATGCGGAGAAACGGCGCGCCAGAAGCTCAG
AACTCTAGCGCGCGCACCGGATCCCCGGCGCTGCAGGCGCTGGCATTCCT
CACGGATAGGCGCGCAGCTGGCCACGAAGCCGACTCGGCGGAAGAAGGGT
CCGGTAACATTGCCCCACCTCGTCAGAGCTCGAGGCGGAATCGCATAGAT
GATCTGGAAGAAATGATGATGATGGAGGCGATCCGACTCAGTCTAGCGAG
CGAGGAAGAGCGGCGCAAGAGAGAGGAGAAAGAGGCCAAGAAAGAGGCAA
AGAAAAAGGAGAAGGAAGCCAAGAAGGCAGAAAAGGTTGCGCGCAAAACC
GGGCTCACCAGTAACAATGCGAGCAGCTCCGCCTTGGATGTGCTTCCGGA
TGCGCGGCTAGGTAGGGTCACGAGCAGTTCCTCTTCCATTGCGGCTGAGG
AGGTTGTATCGGCCGGCAAGGGTAAGGAGGTAGACCGTTCTGTACCAGCT
GGTGGCTCTGCTGCTGAACCCAGTACTGCGGCCGAGGAAGTGCAGCCCGC
GGCGGCATCGGCAAGCCCGGCCGATCAAGCGCCGAGTATGTCACCTCCAA
CGATTGTCCAATCGTCGTCCAAAGATGTCACGAGGCCTTCGCATCTTCGG
CATGTTTCTAGTGCATCGTCATCGTTCTCCTCGCTGGTCGAATCGATGTC
GGAAGATCATGCGGGCTCCGCGGAGGGAGCAGGCTCCTTTGCAGAGCCCC
TTTACAATTTCCGCAGTCTGGCAGCCGTGATTGGAGATGAAGAGAAGGGC
GACGAGGCACCCGAGCATGTTGAAGAGACCTCGTCCAAGCCGAATGTGGA
GGGGTCAGCCTCGCAGTCCGTTCAGCCGGTGGCAGAGGCATCGGTTGCTG
AACCCGCGACTACCACTGAGGCCAAGGTACCGATGGAGGAGCAGCGCGAC
AATTTGATACCGAAAGAGCTGGAGACCCAATCCGTCGAAATTACAGGTAC
CACACATGATACGGAAGCGACGTCCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SIP5_2CAN33_12355Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12355-T1.exon1CAN33_12355-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12355-T1.cdsCAN33_12355-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12355-T1CAN33_12355-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
ProductSNF1-interacting protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:120299..121576 +