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CAN33_12505-T1, CAN33_12505-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12505-T1
Unique NameCAN33_12505-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:208886..209414+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12505-T1 ID=CAN33_12505-T1|Name=CAN33_12505-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=529bp|location=Sequence derived from alignment at NKJJ01000010.1:208886..209414+ (Aspergillus niger FDAARGOS_311)
ATGCCTGCCGGAATGTACGTCCCAATATCCCTTCCATTGCTATTACACCC
TATCCCAGACAGATCCATTCGCTCATCCACCCCCACCACTACCTAACTAC
CCCGATCACCCCCATCCCATCCATCGCAAGATAAAACCCCCAAAGACATT
GACTCACACCTCGATAAAATCACAGCTTCAACTCCACCTACTACGGCAAA
GACTACCGCGCCGGAGCGGCCCTTCTCCGTGCCCGTCGCCCGTATCTATT
CAAGAATGCCTTGACGGGTCTTGCCTTGGTGTCTTTTACCATTAGTGTTT
GTACGTCCAGACCTTCTATCCAGCACTGTTGCTGCTTCTTGTTGTGGATG
CGCGCATGCGCAAATTCTATCCCAAGATGATCTCCAGTCCCCTTGACATA
TATTCAAAAGAATGCTGAATGGCTAATGTTATCTCCCGTGGTTGCATAGA
CGCCTACACCATCCGCGCCGTCGGACAGGATGAGTTCTCGGACGTGAAGG
TTCCCGATGAGCCGGCTAAGAAGCAATGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:208886..209414+

>CAN33_12505-T1 ID=CAN33_12505-T1|Name=CAN33_12505-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=657bp|location=Sequence derived from alignment at NKJJ01000010.1:208886..209414+ (Aspergillus niger FDAARGOS_311)
ATGCCTGCCGGAATCTTCAACTCCACCTACTACGGCAAAGACTACCGCGC
CGGAGCGGCCCTTCTCCGTGCCCGTCGCCCGTATCTATTCAAGAATGCCT
TGACGGGTCTTGCCTTGGTGTCTTTTACCATTAGTGTTTACGCCTACACC
ATCCGCGCCGTCGGACAGGATGAGTTCTCGGACGTGAAGGTTCCCGATGA
GCCGGCTAAGAAGCAATGAATGCCTGCCGGAATCTTCAACTCCACCTACT
ACGGCAAAGACTACCGCGCCGGAGCGGCCCTTCTCCGTGCCCGTCGCCCG
TATCTATTCAAGAATGCCTTGACGGGTCTTGCCTTGGTGTCTTTTACCAT
TAGTGTTTACGCCTACACCATCCGCGCCGTCGGACAGGATGAGTTCTCGG
ACGTGAAGGTTCCCGATGAGCCGGCTAAGAAGCAATGAATGCCTGCCGGA
ATCTTCAACTCCACCTACTACGGCAAAGACTACCGCGCCGGAGCGGCCCT
TCTCCGTGCCCGTCGCCCGTATCTATTCAAGAATGCCTTGACGGGTCTTG
CCTTGGTGTCTTTTACCATTAGTGTTTACGCCTACACCATCCGCGCCGTC
GGACAGGATGAGTTCTCGGACGTGAAGGTTCCCGATGAGCCGGCTAAGAA
GCAATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12505CAN33_12505Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12505-T1.exon1CAN33_12505-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_12505-T1.exon2CAN33_12505-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12505-T1.exon3CAN33_12505-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12505-T1.cdsCAN33_12505-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12505-T1CAN33_12505-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265KSE
DBxrefInterPro:IPR018628
ProductCoiled-coil domain-containing protein 56 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:208886..209414 +
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