You are here

Home

CAN33_12555-T1, CAN33_12555-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12555-T1
Unique NameCAN33_12555-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:230212..231000-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12555-T1 ID=CAN33_12555-T1|Name=CAN33_12555-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=789bp|location=Sequence derived from alignment at NKJJ01000010.1:230212..231000- (Aspergillus niger FDAARGOS_311)
ATGCTAGACCACTTCACCATCGGCAAAGGCGCCGGTTTCCCGGACCACCC
GCACCGAGGCCAAGAAACCATCACATACCTCCTCTCAGGCGGAGTCGACC
ATGAAGACTTCGCCGGAAACCGAGGCACCATTGGCCCTGGCGATCTCCAA
TTCATGACCGCCGGACGAGGCATCATGCACGCGGAGATGCCGCACGAGAA
TCCGGACGGCAGTCCCAACGTCGGCATGCAGCTCTGGGTGGACCTGCCCA
AGGAGCTGAAGATGTGCGAGCCGCGGTACCGCGATCTGCGGGCGTCGGAG
ATCCCCATTGCCACAGCGGATGACGGGCGCGTCACGGTGAAGGTCATCTC
TGGGCAGTCGCATGGAGTTGATTCGGTACGGGATCTGGCGTACACGCCTG
TTTGGCTGTTGGATGTGACGGTGAAGCCTGGGGGCCGTGTGAAGCAGGTG
CTCCCCGTGGGGTGGAACGCGTTTGCGTATACGTTGGCCGGAAAGACAAT
TTTCGGGTCCGGCGGGGAGACGAAGACCATTAAGGAGTTTCATAATGTGG
TGTTTGAGCAGAAGGGCGATTTCGTCGAGGCGTCGGTTCCCGAGAATGCG
GATGAGGAAGGAAGGTTCCTTTTGGTGGCGGGGCAGCCGTTGGATCAGAA
GGTCGTGCAGTATGGCCCGTTCGTGGTCACCAGTGAGCAGGAGGTGTATC
AGGCGATGGTGGACTTCCAGACTGCGTCGAATGGGTTTGAGAAGTCCAGG
AATTGGGAGAGTGAGATTGGGAAGCGCATGGCTTATTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:230212..231000-

>CAN33_12555-T1 ID=CAN33_12555-T1|Name=CAN33_12555-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=789bp|location=Sequence derived from alignment at NKJJ01000010.1:230212..231000- (Aspergillus niger FDAARGOS_311)
ATGCTAGACCACTTCACCATCGGCAAAGGCGCCGGTTTCCCGGACCACCC
GCACCGAGGCCAAGAAACCATCACATACCTCCTCTCAGGCGGAGTCGACC
ATGAAGACTTCGCCGGAAACCGAGGCACCATTGGCCCTGGCGATCTCCAA
TTCATGACCGCCGGACGAGGCATCATGCACGCGGAGATGCCGCACGAGAA
TCCGGACGGCAGTCCCAACGTCGGCATGCAGCTCTGGGTGGACCTGCCCA
AGGAGCTGAAGATGTGCGAGCCGCGGTACCGCGATCTGCGGGCGTCGGAG
ATCCCCATTGCCACAGCGGATGACGGGCGCGTCACGGTGAAGGTCATCTC
TGGGCAGTCGCATGGAGTTGATTCGGTACGGGATCTGGCGTACACGCCTG
TTTGGCTGTTGGATGTGACGGTGAAGCCTGGGGGCCGTGTGAAGCAGGTG
CTCCCCGTGGGGTGGAACGCGTTTGCGTATACGTTGGCCGGAAAGACAAT
TTTCGGGTCCGGCGGGGAGACGAAGACCATTAAGGAGTTTCATAATGTGG
TGTTTGAGCAGAAGGGCGATTTCGTCGAGGCGTCGGTTCCCGAGAATGCG
GATGAGGAAGGAAGGTTCCTTTTGGTGGCGGGGCAGCCGTTGGATCAGAA
GGTCGTGCAGTATGGCCCGTTCGTGGTCACCAGTGAGCAGGAGGTGTATC
AGGCGATGGTGGACTTCCAGACTGCGTCGAATGGGTTTGAGAAGTCCAGG
AATTGGGAGAGTGAGATTGGGAAGCGCATGGCTTATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12555CAN33_12555Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12555-T1.cdsCAN33_12555-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12555-T1.exon1CAN33_12555-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12555-T1CAN33_12555-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR003829
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR012093
DBxrefInterPro:IPR008778
DBxrefPFAM:PF05726
DBxrefPFAM:PF02678
ProductPirin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:230212..231000 -
Powered by Drupal