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CAN33_12870-T1, CAN33_12870-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12870-T1
Unique NameCAN33_12870-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:446514..448229-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12870-T1 ID=CAN33_12870-T1|Name=CAN33_12870-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1716bp|location=Sequence derived from alignment at NKJJ01000010.1:446514..448229- (Aspergillus niger FDAARGOS_311)
ATGTATTGCCAGAAGTGCCGGACTCCCTTGAAGTTGGATGGCTCTCTAGA
GTCCCTCAACCCCGCCGCCTTCGACCTGCTGATCGGTAGGTAATCTCAGC
TTTGGCCTCTCCTCTCTCTCTTTAGTTGCCCGGAATCGAGCCGGAAATTA
ATCATATCTCTCGTCGCAAACTATCCAGGCTCAACAGGTAGATCCCTGCC
AGACCATGGCACCCATTCGTCATCCCGACCTTCCTACCCCCAAGAGCGAC
GAGAGCTTTACGACCGGGCCTCTAAGCATGCTACATCACCGGTGTATCGA
AGATCGGTTCCAGCTCCCCGCCAGGCAGGCAGTAATCAGACCAACCCTCC
CAGGCTAGGCCGAGGTGACAGTGGTAACATGTCGTTTGTGATGCTCACGG
AGTCTCAAGTTGGGCCGCCACATGGACTGTCTGGTATCAGCGGCGATAGT
CCTTCGAACAGTAAGCCGCCGGTCAGCACACAGTCCAATGATCGCGGGCC
GGACGACGCATCCTTCGCAGATCAAGTCGAACGAACAATCCGGCTGTTTG
ATATAATCTCCGCGCGATCCGACATTGACCATCCTATCTGCACGGAATGC
ACCGAGATGCTCGTGGACGGTTTACAGCAACGACTAGTAGATGCCACAAA
GGAGCGGGATGCATACATTTCATTCTTGCGAAACCTGAATTCCTCTGTCC
CCACAGCTGAAGAGCTCGAGGCGGCCCAGAAGTCGCTACAGGAGACCTTG
GACGCGGAAAAGCTCGCCTTTGAAGAGCTCCTTGCGTTGGAAATAGAGAA
ACAAGCTTTGGATGAAGAAATCGCCGGCTTGGAGGAGGAAGCTCGTCAAT
TGGATCTTGAAGAAGAAAAGTTCTGGCGTGATCGCAATTCATTTGCTTTG
ACCCTCTCCGATTTCCAGAACGAACGCGATGCGCTAAACATGAAATACGA
CCATGACTCTCGCCAGCTTGAGAGACTACAAAGGACCAATGTGTACAATG
ATGCCTTCTGCATCGGTCACGATGGCTACTTTGGAACGATCAATGGGTTG
CGGCTTGGTCGATTGGCTAACCCATCGGTAGATTGGCCCGAGATCAATGC
TGCTTGGGGTCAGACAGCGCTCCTTCTGGCAACCATCGCCGACAAGTTAG
GCTTCCAGTTTCAAGGGTATCAAATCAAGCCAATGGGATCTATGTCCAGA
ATAGAGAAGATCGAGCAGTCTCGACCATCCCCGGCTCAGTCGGCGCTGAG
TGGAGCAAATGCGATGTCATCCGCACCTCCCAAGATCACCGTCCTCGACC
TGTTCTCGTCGGGCGAGCTGCCTCTAAATCTTCCTTGGCTTCACCGCCGG
TTTGATGCAGGCATGGTGGCGTTTCTGGAATGTTTACGTCAACTAGGTGA
ATTTGTGGAGAAGACGCCGGTGCCTGTGCCCTCAAATCGCCGGGGTCAGG
CCAACACTGCAGTGCCCGGATTGAAGCTTCCATACGAAATCAAGCGCGAC
AAGATTGGCGACGCCAGCATCAAGCTTGGCTTCAACCAGAACGACGAAAC
CTGGACCCGTGCGTGCAAATACACCCTGACCTGTTGTAAGTTCCTGCTGG
CGCATGCGAGCAACGTTGCTAGCGCGGGATCCAGTAATTCTGCTGCCGTC
GCAGCAGCAGCAGTTGCAGCTGGCGAACAAGCTGGGATGCCTACGACTAA
CCCTACGACCAAATGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:446514..448229-

>CAN33_12870-T1 ID=CAN33_12870-T1|Name=CAN33_12870-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3246bp|location=Sequence derived from alignment at NKJJ01000010.1:446514..448229- (Aspergillus niger FDAARGOS_311)
GCTCAACAGGTAGATCCCTGCCAGACCATGGCACCCATTCGTCATCCCGA
CCTTCCTACCCCCAAGAGCGACGAGAGCTTTACGACCGGGCCTCTAAGCA
TGCTACATCACCGGTGTATCGAAGATCGGTTCCAGCTCCCCGCCAGGCAG
GCAGTAATCAGACCAACCCTCCCAGGCTAGGCCGAGGTGACAGTGGTAAC
ATGTCGTTTGTGATGCTCACGGAGTCTCAAGTTGGGCCGCCACATGGACT
GTCTGGTATCAGCGGCGATAGTCCTTCGAACAGTAAGCCGCCGGTCAGCA
CACAGTCCAATGATCGCGGGCCGGACGACGCATCCTTCGCAGATCAAGTC
GAACGAACAATCCGGCTGTTTGATATAATCTCCGCGCGATCCGACATTGA
CCATCCTATCTGCACGGAATGCACCGAGATGCTCGTGGACGGTTTACAGC
AACGACTAGTAGATGCCACAAAGGAGCGGGATGCATACATTTCATTCTTG
CGAAACCTGAATTCCTCTGTCCCCACAGCTGAAGAGCTCGAGGCGGCCCA
GAAGTCGCTACAGGAGACCTTGGACGCGGAAAAGCTCGCCTTTGAAGAGC
TCCTTGCGTTGGAAATAGAGAAACAAGCTTTGGATGAAGAAATCGCCGGC
TTGGAGGAGGAAGCTCGTCAATTGGATCTTGAAGAAGAAAAGTTCTGGCG
TGATCGCAATTCATTTGCTTTGACCCTCTCCGATTTCCAGAACGAACGCG
ATGCGCTAAACATGAAATACGACCATGACTCTCGCCAGCTTGAGAGACTA
CAAAGGACCAATGTGTACAATGATGCCTTCTGCATCGGTCACGATGGCTA
CTTTGGAACGATCAATGGGTTGCGGCTTGGTCGATTGGCTAACCCATCGG
TAGATTGGCCCGAGATCAATGCTGCTTGGGGTCAGACAGCGCTCCTTCTG
GCAACCATCGCCGACAAGTTAGGCTTCCAGTTTCAAGGGTATCAAATCAA
GCCAATGGGATCTATGTCCAGAATAGAGAAGATCGAGCAGTCTCGACCAT
CCCCGGCTCAGTCGGCGCTGAGTGGAGCAAATGCGATGTCATCCGCACCT
CCCAAGATCACCGTCCTCGACCTGTTCTCGTCGGGCGAGCTGCCTCTAAA
TCTTCCTTGGCTTCACCGCCGGTTTGATGCAGGCATGGTGGCGTTTCTGG
AATGTTTACGTCAACTAGGTGAATTTGTGGAGAAGACGCCGGTGCCTGTG
CCCTCAAATCGCCGGGGTCAGGCCAACACTGCAGTGCCCGGATTGAAGCT
TCCATACGAAATCAAGCGCGACAAGATTGGCGACGCCAGCATCAAGCTTG
GCTTCAACCAGAACGACGAAACCTGGACCCGTGCGTGCAAATACACCCTG
ACCTGTTGTAAGTTCCTGCTGGCGCATGCGAGCAACGTTGCTAGCGCGGG
ATCCAGTAATTCTGCTGCCGTCGCAGCAGCAGCAGTTGCAGCTGGCGAAC
AAGCTGGGATGCCTACGACTAACCCTACGACCAAATGAATGTATTGCCAG
AAGTGCCGGACTCCCTTGAAGTTGGATGGCTCTCTAGAGTCCCTCAACCC
CGCCGCCTTCGACCTGCTGATCGGCTCAACAGGTAGATCCCTGCCAGACC
ATGGCACCCATTCGTCATCCCGACCTTCCTACCCCCAAGAGCGACGAGAG
CTTTACGACCGGGCCTCTAAGCATGCTACATCACCGGTGTATCGAAGATC
GGTTCCAGCTCCCCGCCAGGCAGGCAGTAATCAGACCAACCCTCCCAGGC
TAGGCCGAGGTGACAGTGGTAACATGTCGTTTGTGATGCTCACGGAGTCT
CAAGTTGGGCCGCCACATGGACTGTCTGGTATCAGCGGCGATAGTCCTTC
GAACAGTAAGCCGCCGGTCAGCACACAGTCCAATGATCGCGGGCCGGACG
ACGCATCCTTCGCAGATCAAGTCGAACGAACAATCCGGCTGTTTGATATA
ATCTCCGCGCGATCCGACATTGACCATCCTATCTGCACGGAATGCACCGA
GATGCTCGTGGACGGTTTACAGCAACGACTAGTAGATGCCACAAAGGAGC
GGGATGCATACATTTCATTCTTGCGAAACCTGAATTCCTCTGTCCCCACA
GCTGAAGAGCTCGAGGCGGCCCAGAAGTCGCTACAGGAGACCTTGGACGC
GGAAAAGCTCGCCTTTGAAGAGCTCCTTGCGTTGGAAATAGAGAAACAAG
CTTTGGATGAAGAAATCGCCGGCTTGGAGGAGGAAGCTCGTCAATTGGAT
CTTGAAGAAGAAAAGTTCTGGCGTGATCGCAATTCATTTGCTTTGACCCT
CTCCGATTTCCAGAACGAACGCGATGCGCTAAACATGAAATACGACCATG
ACTCTCGCCAGCTTGAGAGACTACAAAGGACCAATGTGTACAATGATGCC
TTCTGCATCGGTCACGATGGCTACTTTGGAACGATCAATGGGTTGCGGCT
TGGTCGATTGGCTAACCCATCGGTAGATTGGCCCGAGATCAATGCTGCTT
GGGGTCAGACAGCGCTCCTTCTGGCAACCATCGCCGACAAGTTAGGCTTC
CAGTTTCAAGGGTATCAAATCAAGCCAATGGGATCTATGTCCAGAATAGA
GAAGATCGAGCAGTCTCGACCATCCCCGGCTCAGTCGGCGCTGAGTGGAG
CAAATGCGATGTCATCCGCACCTCCCAAGATCACCGTCCTCGACCTGTTC
TCGTCGGGCGAGCTGCCTCTAAATCTTCCTTGGCTTCACCGCCGGTTTGA
TGCAGGCATGGTGGCGTTTCTGGAATGTTTACGTCAACTAGGTGAATTTG
TGGAGAAGACGCCGGTGCCTGTGCCCTCAAATCGCCGGGGTCAGGCCAAC
ACTGCAGTGCCCGGATTGAAGCTTCCATACGAAATCAAGCGCGACAAGAT
TGGCGACGCCAGCATCAAGCTTGGCTTCAACCAGAACGACGAAACCTGGA
CCCGTGCGTGCAAATACACCCTGACCTGTTGTAAGTTCCTGCTGGCGCAT
GCGAGCAACGTTGCTAGCGCGGGATCCAGTAATTCTGCTGCCGTCGCAGC
AGCAGCAGTTGCAGCTGGCGAACAAGCTGGGATGCCTACGACTAACCCTA
CGACCAAATGAATGTATTGCCAGAAGTGCCGGACTCCCTTGAAGTTGGAT
GGCTCTCTAGAGTCCCTCAACCCCGCCGCCTTCGACCTGCTGATCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12870CAN33_12870Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12870-T1CAN33_12870-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12870-T1.cdsCAN33_12870-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12870-T1.exon2CAN33_12870-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12870-T1.exon1CAN33_12870-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09262FJB
DBxrefInterPro:IPR041691
DBxrefInterPro:IPR040455
DBxrefInterPro:IPR038274
DBxrefPFAM:PF17675
DBxrefPFAM:PF04111
ProductAutophagy protein Apg6 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:446514..448229 -
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