|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:756691..758793+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_1300-T1 ID=CAN33_1300-T1|Name=CAN33_1300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2103bp|location=Sequence derived from alignment at NKJJ01000004.1:756691..758793+ (Aspergillus niger FDAARGOS_311)
ATGAGCAAAGGTTACTTGGCTAGAGGCGCGATCAAGGAGGCAGAGCCTTT
GGGAGTGAAAGCAGCTGAAATATCTCTCAAACTGCTCGGCCGTGGTGATA
ACGAAACCATACTGCTTGGTCTGAACCTGGACCGGGTGCGACGGCAGCTT
TGGCAACAGCAGAAAGGTCTTCCTGTCGAAGACACAGTATCGTTAACATG
TGACGAGACAACTGACTCAATGATCAGGAGATTGGAGCTTTCACTGATGA
AGAGTCTAATGCGCCCAAACCCAAGTCTCGCCAGGTCCCTCGGGCTGCTA
GGCACGCTGTACAATGCAAAGTGGAGCGAGGATGGTGCCCTGCTTCACCT
GGAAATGGCCATTGACAAGTTTGAACTGGCGATTTTGATTGGGGAAAAGG
ACGATGGAGATCGGCCGGAATGGTTGCGTGCTCTGGGCAAAGCATACAGA
GCCAGGTTCCGATACCAGGATACACTGGAGGACCTGCGAAAGGCCATAGA
GCTTGCCGAAGCAGCCCTGGAATTGAAGGTTGAGCCCGACGAATCTCGTG
CAGAAGACCTCGAGGATCTCTGCCAGAATCTGATTGATCTCCATGAGCGC
GCCTCGGGTCTGGAACATCTCGATAGGGCGATTGAAGTCGGCTTGGAAGC
ATTATCCTTGACTCCACTAGATCACCCCAAAAGAGGACTCTATCTAGGCC
GTCGCGCATCGGAACTCTTGATCCGCTACCAGGAGATTGCAAATCGCGAC
GATCTTGAGAAAGGCATTGAACTAATCACGGCAGCATTGATCTTGACACC
CAAGTCTGAGTCGCAGTGGAGTAATTTCTGTTCGATTCATGCAGACCTTT
ACAGGCAGCGATTCAAACAAGATGGCAATATAAAGGATTTGGAAAAGGCG
GTGGATCATGCCACAGTGGCTGTTCGCGATGGACCGGCAGATAGTCCACT
CTTGTTGGATTCGTTGGCACGGCAATTGGAGTATCGATATCAAGCACTTG
GGAACAAGGAAGACCTCGACAAGTCAATCGTGGCTGCAGAGAGAGCTCTC
GAAGTATGCGAGCCTGGCAGCAAATACCGAGCGGACTATCTCACAACACT
GGGCAATATCCTACTGGAGCGGTTCGATGCAACCGGGCAGCAAGAGGATC
TTAACCATGCAATTCTCCATCTAGAGAACGCCCGTGATATACCGAAGACA
AATGCAGTTGCTGAAGCAAGATGCCTGAGTGGATTAGCTACCGCATTTAC
ATTATGCTACAAACGCACGGATGACCACGCGAGTCTTGAAGCTGCTATTC
ACAATGAAAGACTGGCCCTCGAGACTCTTCCCGATTGGTTTGAAGGAAAA
TCTGAGGTGATGAACAACATGGCACTTCATTTGACAGACAGGTTTCGATG
GACAAAAATGGCCGACGATATCGACGAAGCCGCGAAGTATGCGGAGATGG
TCCTAACCCTGCGCCCTCCCAACCATATGTACTACGCAGGAAGCCTGAAC
AATATTTCCAATATCATGGAGGCTAGATTTTATGAGTCAAAGGACTTGAA
TGATTTGAATTCAGCAATCGAGAAGGCTGAAGATACATTATCAGCCACGC
AAATTGACCATACCAGTCGTGCAGGGCGCCTTTTCAACCTCGGTGCCAAA
TATCATGTCCGATATGGAAAAAGTAATGACCCTCAGGACCTCCAACTTGC
CGTGAAAAGTTTTATAGACGGCTGGAGGATCATCAATGGACCTCCATTCC
ATCGTGTGATGGCTGGTTCTCAGGCCGCGCATCGACTGATGGAATTGGGA
AGACTAGAAGAAGCCACAACGATCGCGATGGAAGTCGTTGATTTGCTTCC
TCAAGTCACTAGCCGATCACTCGGTATCACCGACCAGCAATACGTTGTCC
GCAAATTCTCTGGGATGGCCGGGAACGCCTGTTCCCTCCTCTTGAGCGCT
GGGCGACTGCACGAAGCATTGGAATATCTCGAGCGAGGACGGACTGTCAT
CCTCGATCAGTTAATGAGCAGTCGGATGGATTTCTCCGACCTCGAATCCA
CATATTCCGGAGCATGCTGCAAGATTTCGACAACTCCAGGACGATATCAA
TAA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:756691..758793+ >CAN33_1300-T1 ID=CAN33_1300-T1|Name=CAN33_1300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2103bp|location=Sequence derived from alignment at NKJJ01000004.1:756691..758793+ (Aspergillus niger FDAARGOS_311)
ATGAGCAAAGGTTACTTGGCTAGAGGCGCGATCAAGGAGGCAGAGCCTTT
GGGAGTGAAAGCAGCTGAAATATCTCTCAAACTGCTCGGCCGTGGTGATA
ACGAAACCATACTGCTTGGTCTGAACCTGGACCGGGTGCGACGGCAGCTT
TGGCAACAGCAGAAAGGTCTTCCTGTCGAAGACACAGTATCGTTAACATG
TGACGAGACAACTGACTCAATGATCAGGAGATTGGAGCTTTCACTGATGA
AGAGTCTAATGCGCCCAAACCCAAGTCTCGCCAGGTCCCTCGGGCTGCTA
GGCACGCTGTACAATGCAAAGTGGAGCGAGGATGGTGCCCTGCTTCACCT
GGAAATGGCCATTGACAAGTTTGAACTGGCGATTTTGATTGGGGAAAAGG
ACGATGGAGATCGGCCGGAATGGTTGCGTGCTCTGGGCAAAGCATACAGA
GCCAGGTTCCGATACCAGGATACACTGGAGGACCTGCGAAAGGCCATAGA
GCTTGCCGAAGCAGCCCTGGAATTGAAGGTTGAGCCCGACGAATCTCGTG
CAGAAGACCTCGAGGATCTCTGCCAGAATCTGATTGATCTCCATGAGCGC
GCCTCGGGTCTGGAACATCTCGATAGGGCGATTGAAGTCGGCTTGGAAGC
ATTATCCTTGACTCCACTAGATCACCCCAAAAGAGGACTCTATCTAGGCC
GTCGCGCATCGGAACTCTTGATCCGCTACCAGGAGATTGCAAATCGCGAC
GATCTTGAGAAAGGCATTGAACTAATCACGGCAGCATTGATCTTGACACC
CAAGTCTGAGTCGCAGTGGAGTAATTTCTGTTCGATTCATGCAGACCTTT
ACAGGCAGCGATTCAAACAAGATGGCAATATAAAGGATTTGGAAAAGGCG
GTGGATCATGCCACAGTGGCTGTTCGCGATGGACCGGCAGATAGTCCACT
CTTGTTGGATTCGTTGGCACGGCAATTGGAGTATCGATATCAAGCACTTG
GGAACAAGGAAGACCTCGACAAGTCAATCGTGGCTGCAGAGAGAGCTCTC
GAAGTATGCGAGCCTGGCAGCAAATACCGAGCGGACTATCTCACAACACT
GGGCAATATCCTACTGGAGCGGTTCGATGCAACCGGGCAGCAAGAGGATC
TTAACCATGCAATTCTCCATCTAGAGAACGCCCGTGATATACCGAAGACA
AATGCAGTTGCTGAAGCAAGATGCCTGAGTGGATTAGCTACCGCATTTAC
ATTATGCTACAAACGCACGGATGACCACGCGAGTCTTGAAGCTGCTATTC
ACAATGAAAGACTGGCCCTCGAGACTCTTCCCGATTGGTTTGAAGGAAAA
TCTGAGGTGATGAACAACATGGCACTTCATTTGACAGACAGGTTTCGATG
GACAAAAATGGCCGACGATATCGACGAAGCCGCGAAGTATGCGGAGATGG
TCCTAACCCTGCGCCCTCCCAACCATATGTACTACGCAGGAAGCCTGAAC
AATATTTCCAATATCATGGAGGCTAGATTTTATGAGTCAAAGGACTTGAA
TGATTTGAATTCAGCAATCGAGAAGGCTGAAGATACATTATCAGCCACGC
AAATTGACCATACCAGTCGTGCAGGGCGCCTTTTCAACCTCGGTGCCAAA
TATCATGTCCGATATGGAAAAAGTAATGACCCTCAGGACCTCCAACTTGC
CGTGAAAAGTTTTATAGACGGCTGGAGGATCATCAATGGACCTCCATTCC
ATCGTGTGATGGCTGGTTCTCAGGCCGCGCATCGACTGATGGAATTGGGA
AGACTAGAAGAAGCCACAACGATCGCGATGGAAGTCGTTGATTTGCTTCC
TCAAGTCACTAGCCGATCACTCGGTATCACCGACCAGCAATACGTTGTCC
GCAAATTCTCTGGGATGGCCGGGAACGCCTGTTCCCTCCTCTTGAGCGCT
GGGCGACTGCACGAAGCATTGGAATATCTCGAGCGAGGACGGACTGTCAT
CCTCGATCAGTTAATGAGCAGTCGGATGGATTTCTCCGACCTCGAATCCA
CATATTCCGGAGCATGCTGCAAGATTTCGACAACTCCAGGACGATATCAA
TAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR011990 |
| Product | Tetratricopeptide repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:756691..758793 + |
|
