|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:637177..638176+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13160-T1 ID=CAN33_13160-T1|Name=CAN33_13160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1000bp|location=Sequence derived from alignment at NKJJ01000010.1:637177..638176+ (Aspergillus niger FDAARGOS_311)
ATGGCTAGCGAGAATTCAGAGTTTAAGCTATACAGATACGATCCCTCTAT
TGCTGCAGCTGTCGTCTTCATCATTCTTTTCCTGGCTGCAGCAGGCATTC
ATACGTTCCAAGTAGCCCGAACAAGAGCATGGTTCGTCATCCCGTTTGTC
ATCGGCGGACATTGTGAGTCTTCAACCTCGACAACCGTCGCAGTCTCACC
ACTAATCCATGTCAATCCAGTGGAATGGATCGGATATATTGGCGTAGGTC
TACGTCTACCTGCCATTCTCTTGTGCTACAACTGACCTTCTAGCGTGCCG
TCTCCGGAGACGAGGCCCCCGATTTTACTGTGAAACCTTATATCCTCCAA
ACCCTCCTCCTCCTCGTTGCACCCACCCTCTTCGCCGCAACCATCTACAT
GGAGCTCGGCCGGATTGTACTCCTAACAAACGGAGAGGCATATTGCCTCA
TTCGCCGAACGTGGCTAACCAAGACATTTCTGCTCGGAGACATCATCTCG
TTCATTATGCAAGGCGCAGGTAATCTCCCCTACCTCCCTTATTGATGCAG
GTTTACTCTGCTAAGACTCATTCAGGGGGCGGGATAATGGCCTCTGGAAC
ACCCAACGCCCTAACAACTGGCGAGAATATCATAATCGGCGGTCTCGTCG
CACAACTAATCTTCTTCTCGCTCTTCGTCATAACGAGTATAAAATTCCAC
CGCGGAGTGTCGAATACTCCATCACGCCGTGTCCTTCACTCCCAAGCGCC
CTGGAAGCGGCACATGTACGCCCTGTACGGGGGAAGCGCGCTTATCTTTG
TCCGATCACTGTTCCGATTGATTGAATATGCGCAGGGAAATGACGGGTAT
CTAGTATCACATGAGGTATACCTGTACATCTTTGATGCGTTGCTCATGGT
GCTGGTTATGGCTCTCTTTGCATGGGTGCATCCGAGTGAAGTGCATGCGT
TATTGACGCCGGGGGGTCGGGGAGGGCTGCTGAACGGGTGTTTTGGTTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:637177..638176+ >CAN33_13160-T1 ID=CAN33_13160-T1|Name=CAN33_13160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3348bp|location=Sequence derived from alignment at NKJJ01000010.1:637177..638176+ (Aspergillus niger FDAARGOS_311)
ATGGCTAGCGAGAATTCAGAGTTTAAGCTATACAGATACGATCCCTCTAT
TGCTGCAGCTGTCGTCTTCATCATTCTTTTCCTGGCTGCAGCAGGCATTC
ATACGTTCCAAGTAGCCCGAACAAGAGCATGGTTCGTCATCCCGTTTGTC
ATCGGCGGACATTTGGAATGGATCGGATATATTGGCCGTGCCGTCTCCGG
AGACGAGGCCCCCGATTTTACTGTGAAACCTTATATCCTCCAAACCCTCC
TCCTCCTCGTTGCACCCACCCTCTTCGCCGCAACCATCTACATGGAGCTC
GGCCGGATTGTACTCCTAACAAACGGAGAGGCATATTGCCTCATTCGCCG
AACGTGGCTAACCAAGACATTTCTGCTCGGAGACATCATCTCGTTCATTA
TGCAAGGCGCAGGGGGCGGGATAATGGCCTCTGGAACACCCAACGCCCTA
ACAACTGGCGAGAATATCATAATCGGCGGTCTCGTCGCACAACTAATCTT
CTTCTCGCTCTTCGTCATAACGAGTATAAAATTCCACCGCGGAGTGTCGA
ATACTCCATCACGCCGTGTCCTTCACTCCCAAGCGCCCTGGAAGCGGCAC
ATGTACGCCCTGTACGGGGGAAGCGCGCTTATCTTTGTCCGATCACTGTT
CCGATTGATTGAATATGCGCAGGGAAATGACGGGTATCTAGTATCACATG
AGGTATACCTGTACATCTTTGATGCGTTGCTCATGGTGCTGGTTATGGCT
CTCTTTGCATGGGTGCATCCGAGTGAAGTGCATGCGTTATTGACGCCGGG
GGGTCGGGGAGGGCTGCTGAACGGGTGTTTTGGTTGAATGGCTAGCGAGA
ATTCAGAGTTTAAGCTATACAGATACGATCCCTCTATTGCTGCAGCTGTC
GTCTTCATCATTCTTTTCCTGGCTGCAGCAGGCATTCATACGTTCCAAGT
AGCCCGAACAAGAGCATGGTTCGTCATCCCGTTTGTCATCGGCGGACATT
TGGAATGGATCGGATATATTGGCCGTGCCGTCTCCGGAGACGAGGCCCCC
GATTTTACTGTGAAACCTTATATCCTCCAAACCCTCCTCCTCCTCGTTGC
ACCCACCCTCTTCGCCGCAACCATCTACATGGAGCTCGGCCGGATTGTAC
TCCTAACAAACGGAGAGGCATATTGCCTCATTCGCCGAACGTGGCTAACC
AAGACATTTCTGCTCGGAGACATCATCTCGTTCATTATGCAAGGCGCAGG
GGGCGGGATAATGGCCTCTGGAACACCCAACGCCCTAACAACTGGCGAGA
ATATCATAATCGGCGGTCTCGTCGCACAACTAATCTTCTTCTCGCTCTTC
GTCATAACGAGTATAAAATTCCACCGCGGAGTGTCGAATACTCCATCACG
CCGTGTCCTTCACTCCCAAGCGCCCTGGAAGCGGCACATGTACGCCCTGT
ACGGGGGAAGCGCGCTTATCTTTGTCCGATCACTGTTCCGATTGATTGAA
TATGCGCAGGGAAATGACGGGTATCTAGTATCACATGAGGTATACCTGTA
CATCTTTGATGCGTTGCTCATGGTGCTGGTTATGGCTCTCTTTGCATGGG
TGCATCCGAGTGAAGTGCATGCGTTATTGACGCCGGGGGGTCGGGGAGGG
CTGCTGAACGGGTGTTTTGGTTGAATGGCTAGCGAGAATTCAGAGTTTAA
GCTATACAGATACGATCCCTCTATTGCTGCAGCTGTCGTCTTCATCATTC
TTTTCCTGGCTGCAGCAGGCATTCATACGTTCCAAGTAGCCCGAACAAGA
GCATGGTTCGTCATCCCGTTTGTCATCGGCGGACATTTGGAATGGATCGG
ATATATTGGCCGTGCCGTCTCCGGAGACGAGGCCCCCGATTTTACTGTGA
AACCTTATATCCTCCAAACCCTCCTCCTCCTCGTTGCACCCACCCTCTTC
GCCGCAACCATCTACATGGAGCTCGGCCGGATTGTACTCCTAACAAACGG
AGAGGCATATTGCCTCATTCGCCGAACGTGGCTAACCAAGACATTTCTGC
TCGGAGACATCATCTCGTTCATTATGCAAGGCGCAGGGGGCGGGATAATG
GCCTCTGGAACACCCAACGCCCTAACAACTGGCGAGAATATCATAATCGG
CGGTCTCGTCGCACAACTAATCTTCTTCTCGCTCTTCGTCATAACGAGTA
TAAAATTCCACCGCGGAGTGTCGAATACTCCATCACGCCGTGTCCTTCAC
TCCCAAGCGCCCTGGAAGCGGCACATGTACGCCCTGTACGGGGGAAGCGC
GCTTATCTTTGTCCGATCACTGTTCCGATTGATTGAATATGCGCAGGGAA
ATGACGGGTATCTAGTATCACATGAGGTATACCTGTACATCTTTGATGCG
TTGCTCATGGTGCTGGTTATGGCTCTCTTTGCATGGGTGCATCCGAGTGA
AGTGCATGCGTTATTGACGCCGGGGGGTCGGGGAGGGCTGCTGAACGGGT
GTTTTGGTTGAATGGCTAGCGAGAATTCAGAGTTTAAGCTATACAGATAC
GATCCCTCTATTGCTGCAGCTGTCGTCTTCATCATTCTTTTCCTGGCTGC
AGCAGGCATTCATACGTTCCAAGTAGCCCGAACAAGAGCATGGTTCGTCA
TCCCGTTTGTCATCGGCGGACATTTGGAATGGATCGGATATATTGGCCGT
GCCGTCTCCGGAGACGAGGCCCCCGATTTTACTGTGAAACCTTATATCCT
CCAAACCCTCCTCCTCCTCGTTGCACCCACCCTCTTCGCCGCAACCATCT
ACATGGAGCTCGGCCGGATTGTACTCCTAACAAACGGAGAGGCATATTGC
CTCATTCGCCGAACGTGGCTAACCAAGACATTTCTGCTCGGAGACATCAT
CTCGTTCATTATGCAAGGCGCAGGGGGCGGGATAATGGCCTCTGGAACAC
CCAACGCCCTAACAACTGGCGAGAATATCATAATCGGCGGTCTCGTCGCA
CAACTAATCTTCTTCTCGCTCTTCGTCATAACGAGTATAAAATTCCACCG
CGGAGTGTCGAATACTCCATCACGCCGTGTCCTTCACTCCCAAGCGCCCT
GGAAGCGGCACATGTACGCCCTGTACGGGGGAAGCGCGCTTATCTTTGTC
CGATCACTGTTCCGATTGATTGAATATGCGCAGGGAAATGACGGGTATCT
AGTATCACATGAGGTATACCTGTACATCTTTGATGCGTTGCTCATGGTGC
TGGTTATGGCTCTCTTTGCATGGGTGCATCCGAGTGAAGTGCATGCGTTA
TTGACGCCGGGGGGTCGGGGAGGGCTGCTGAACGGGTGTTTTGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000101.1 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:637177..638176 + |
|
