You are here

Home

CAN33_13830-T1, CAN33_13830-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13830-T1
Unique NameCAN33_13830-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1078932..1079937+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13830-T1 ID=CAN33_13830-T1|Name=CAN33_13830-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1006bp|location=Sequence derived from alignment at NKJJ01000010.1:1078932..1079937+ (Aspergillus niger FDAARGOS_311)
ATGGCACCAGTCGCTGTGTCTCCTGAATCCCCGGTGTTTAACACCAAGCG
TGACGGACAGGCTCTCGAGGAGCTGTCGGATGCTATTGACAATGTCAACG
TCCTCAAGGACAACATGAAGAAGGAGAAGGGTCTGTACGAAGAGTCCGAG
TTTGACAAGAACAAGGACAAGACCAAGTTCCGTCAGTACGAAGATGCCTG
CGACCGGGTCAAGAACTTCTACAAGGAACAGCACACCAAGCAGACCGTGG
CCTACAACCTCAAGGCCCGCAACGAGTTCCACTCCAAGACCCGCGCGGAG
ATGACCATCTGGGAGGCGATGGAGAAGCTCAACACCCTCATCGACGAGTC
CGACCCGGACACCAGCCTCTCTCAGATCGAGCACCTCCTGCAATCCGCCG
AGGCCATTCGCCGCGACGGCAAGCCCCGCTGGATGCAGCTGACCGGTCTC
ATCCACGACCTGGGCAAGCTGCTCTACTTCTTCGACGCCCAGGGCCAGTG
GGATGTCGTCGGAGACACCTTCCCCGTCGGCTGTGGTTTCGATGAGCGCA
TCATCTACGGCCGTGAGTCCTTCAAGGACAACGAGGACTTCGGCCACCCC
ATCTACGACACCAAGTTCGGAATCTACAGCCCCGGCTGCGGCCTCGACAA
CGTCATGCTCTCCTGGGGTCACGACGAATACCTCTACCATGTCGTCAAGG
ACCAGTCCACTCTCCCGGACGAGGCCCTCGCCATGATCCGCTACCACTCG
TTCTACCCCTGGCACAATGCCGGCGCTTACCACGAGCTGATGAACGACCA
CGACAAGGAGATGTTCAAGGCTGTCAAGGCATTCAACCCATACGACCTGT
ACAGCAAGAGCGACGATGTCCCCAGCCCTGAGGAACTCAAGGTAAGCCTA
CCCCATTACTCCGACTTTGGTGAACATAAGACTAACAAATGTCGAACAGC
CATACTACCTCGACCTGATCGACGAATACTTCCCCAACAAGGTGATCAAG
TGGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:1078932..1079937+

>CAN33_13830-T1 ID=CAN33_13830-T1|Name=CAN33_13830-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1896bp|location=Sequence derived from alignment at NKJJ01000010.1:1078932..1079937+ (Aspergillus niger FDAARGOS_311)
ATGGCACCAGTCGCTGTGTCTCCTGAATCCCCGGTGTTTAACACCAAGCG
TGACGGACAGGCTCTCGAGGAGCTGTCGGATGCTATTGACAATGTCAACG
TCCTCAAGGACAACATGAAGAAGGAGAAGGGTCTGTACGAAGAGTCCGAG
TTTGACAAGAACAAGGACAAGACCAAGTTCCGTCAGTACGAAGATGCCTG
CGACCGGGTCAAGAACTTCTACAAGGAACAGCACACCAAGCAGACCGTGG
CCTACAACCTCAAGGCCCGCAACGAGTTCCACTCCAAGACCCGCGCGGAG
ATGACCATCTGGGAGGCGATGGAGAAGCTCAACACCCTCATCGACGAGTC
CGACCCGGACACCAGCCTCTCTCAGATCGAGCACCTCCTGCAATCCGCCG
AGGCCATTCGCCGCGACGGCAAGCCCCGCTGGATGCAGCTGACCGGTCTC
ATCCACGACCTGGGCAAGCTGCTCTACTTCTTCGACGCCCAGGGCCAGTG
GGATGTCGTCGGAGACACCTTCCCCGTCGGCTGTGGTTTCGATGAGCGCA
TCATCTACGGCCGTGAGTCCTTCAAGGACAACGAGGACTTCGGCCACCCC
ATCTACGACACCAAGTTCGGAATCTACAGCCCCGGCTGCGGCCTCGACAA
CGTCATGCTCTCCTGGGGTCACGACGAATACCTCTACCATGTCGTCAAGG
ACCAGTCCACTCTCCCGGACGAGGCCCTCGCCATGATCCGCTACCACTCG
TTCTACCCCTGGCACAATGCCGGCGCTTACCACGAGCTGATGAACGACCA
CGACAAGGAGATGTTCAAGGCTGTCAAGGCATTCAACCCATACGACCTGT
ACAGCAAGAGCGACGATGTCCCCAGCCCTGAGGAACTCAAGCCATACTAC
CTCGACCTGATCGACGAATACTTCCCCAACAAGGTGATCAAGTGGTAGAT
GGCACCAGTCGCTGTGTCTCCTGAATCCCCGGTGTTTAACACCAAGCGTG
ACGGACAGGCTCTCGAGGAGCTGTCGGATGCTATTGACAATGTCAACGTC
CTCAAGGACAACATGAAGAAGGAGAAGGGTCTGTACGAAGAGTCCGAGTT
TGACAAGAACAAGGACAAGACCAAGTTCCGTCAGTACGAAGATGCCTGCG
ACCGGGTCAAGAACTTCTACAAGGAACAGCACACCAAGCAGACCGTGGCC
TACAACCTCAAGGCCCGCAACGAGTTCCACTCCAAGACCCGCGCGGAGAT
GACCATCTGGGAGGCGATGGAGAAGCTCAACACCCTCATCGACGAGTCCG
ACCCGGACACCAGCCTCTCTCAGATCGAGCACCTCCTGCAATCCGCCGAG
GCCATTCGCCGCGACGGCAAGCCCCGCTGGATGCAGCTGACCGGTCTCAT
CCACGACCTGGGCAAGCTGCTCTACTTCTTCGACGCCCAGGGCCAGTGGG
ATGTCGTCGGAGACACCTTCCCCGTCGGCTGTGGTTTCGATGAGCGCATC
ATCTACGGCCGTGAGTCCTTCAAGGACAACGAGGACTTCGGCCACCCCAT
CTACGACACCAAGTTCGGAATCTACAGCCCCGGCTGCGGCCTCGACAACG
TCATGCTCTCCTGGGGTCACGACGAATACCTCTACCATGTCGTCAAGGAC
CAGTCCACTCTCCCGGACGAGGCCCTCGCCATGATCCGCTACCACTCGTT
CTACCCCTGGCACAATGCCGGCGCTTACCACGAGCTGATGAACGACCACG
ACAAGGAGATGTTCAAGGCTGTCAAGGCATTCAACCCATACGACCTGTAC
AGCAAGAGCGACGATGTCCCCAGCCCTGAGGAACTCAAGCCATACTACCT
CGACCTGATCGACGAATACTTCCCCAACAAGGTGATCAAGTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0050113inositol oxygenase activity
Vocabulary: Biological Process
TermDefinition
GO:0019310inositol catabolic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_13830CAN33_13830Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13830-T1.exon1CAN33_13830-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_13830-T1.exon2CAN33_13830-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13830-T1.cdsCAN33_13830-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13830-T1CAN33_13830-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007828
DBxrefPFAM:PF05153
ProductFamily of unknown function (DUF706) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1078932..1079937 +
Powered by Drupal