|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:839218..840331- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_1445-T1 ID=CAN33_1445-T1|Name=CAN33_1445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1114bp|location=Sequence derived from alignment at NKJJ01000004.1:839218..840331- (Aspergillus niger FDAARGOS_311)
ATGTCCTTCGCCGTCCAAGGCCGATCTGCTATCGTGACGGGGGCAGGTTC
AGGTGCGTCACGCATGGTATTGACCGATAAGCACACTTCACTAAGTAGTA
ATTGTAGGAATTAACCTGTCCTTCGCCAAGCTACTCCTCGAACATGGATG
TAACGTCCTGTTCGCCGATCTAGCTCTCCGTCCAGAGGCACAGGCGATAG
TGAATCAATACTCATCGAAGGCGAAGACGCCACGGGCCGTCTTCCAGCGG
ACCGACGTGACCGATTGGCAACAGCTCGAGCGCATGTTCGAGGTAGCAGA
GCGGGAATTCGGAGAACTCGATGTTGTGTGTCCCGGCGCAGGCATCTTTG
AACCGGTATAGTTTCCCTATACACCGACCCCAGTGTTCTGCATCACGCAA
GGGGCAGTATACTGCAGGGACGTTCCGCTTGCTCACGCCAGATTTACATC
ACAGCATTGGACCAACTTCTGGCGTCCTCCAGGAACCCCTGAAAGCCGAG
ACCCGCGATATGGAGGTCGCTATGCCCTTCTCGATATCAACCTCACGCAT
CCGATTCGCACCACACAGCTAGCCATTGCCCATTTCCTGCGCCATGGGAA
TAAGCAGAGACGCAAACACATCGTTCATATCTCTAGCATTGCCGGTCAAA
ACCCCAATTTCGTCGCCCCGATCTATGTCGCTACGAAACACGGCATCAAT
GGCTTGGTACGGTCTTTGGCTGGCCTGGATCAGGAGTGCGGAATCCGTAT
CACAGCTGTTGCGCCGGGAGTTATCAAGACACCGTTGTGGACAGACCATC
CTGAAAAGCTCAAGGTAGTGAACGAAGGGGCCGATGCATGGGTAACTCCA
GACGAGGTAGCAGAGGTCATGTTGGCGCTTATCCAACAGGATAAGGTGAG
CGGTATCATTGGGGATCAGAGTGGTCGTGGTCCCCAGTACCCAGTCAGTG
GCGGAACTATCTTGGAGGTCTCCAAGACGGTTCGCTCGGTAGAGCCCTTT
AATGATGCTGGGCCTGGAAATCGACCAGGCAATACGGTATCTGATAACAG
TGCGTTGATCAATGAAACACTTGGTCTGCTATCGCAGCGTGGATGGGGAA
TGCCCAAGTTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:839218..840331- >CAN33_1445-T1 ID=CAN33_1445-T1|Name=CAN33_1445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2880bp|location=Sequence derived from alignment at NKJJ01000004.1:839218..840331- (Aspergillus niger FDAARGOS_311)
CATTGGACCAACTTCTGGCGTCCTCCAGGAACCCCTGAAAGCCGAGACCC
GCGATATGGAGGTCGCTATGCCCTTCTCGATATCAACCTCACGCATCCGA
TTCGCACCACACAGCTAGCCATTGCCCATTTCCTGCGCCATGGGAATAAG
CAGAGACGCAAACACATCGTTCATATCTCTAGCATTGCCGGTCAAAACCC
CAATTTCGTCGCCCCGATCTATGTCGCTACGAAACACGGCATCAATGGCT
TGGTACGGTCTTTGGCTGGCCTGGATCAGGAGTGCGGAATCCGTATCACA
GCTGTTGCGCCGGGAGTTATCAAGACACCGTTGTGGACAGACCATCCTGA
AAAGCTCAAGGTAGTGAACGAAGGGGCCGATGCATGGGTAACTCCAGACG
AGGTAGCAGAGGTCATGTTGGCGCTTATCCAACAGGATAAGGTGAGCGGT
ATCATTGGGGATCAGAGTGGTCGTGGTCCCCAGTACCCAGTCAGTGGCGG
AACTATCTTGGAGGTCTCCAAGACGGTTCGCTCGGTAGAGCCCTTTAATG
ATGCTGGGCCTGGAAATCGACCAGGCAATACGGTATCTGATAACAGTGCG
TTGATCAATGAAACACTTGGTCTGCTATCGCAGCGTGGATGGGGAATGCC
CAAGTTGTAGGAATTAACCTGTCCTTCGCCAAGCTACTCCTCGAACATGG
ATGTAACGTCCTGTTCGCCGATCTAGCTCTCCGTCCAGAGGCACAGGCGA
TAGTGAATCAATACTCATCGAAGGCGAAGACGCCACGGGCCGTCTTCCAG
CGGACCGACGTGACCGATTGGCAACAGCTCGAGCGCATGTTCGAGGTAGC
AGAGCGGGAATTCGGAGAACTCGATGTTGTGTGTCCCGGCGCAGGCATCT
TTGAACCGATGTCCTTCGCCGTCCAAGGCCGATCTGCTATCGTGACGGGG
GCAGGTTCAGCATTGGACCAACTTCTGGCGTCCTCCAGGAACCCCTGAAA
GCCGAGACCCGCGATATGGAGGTCGCTATGCCCTTCTCGATATCAACCTC
ACGCATCCGATTCGCACCACACAGCTAGCCATTGCCCATTTCCTGCGCCA
TGGGAATAAGCAGAGACGCAAACACATCGTTCATATCTCTAGCATTGCCG
GTCAAAACCCCAATTTCGTCGCCCCGATCTATGTCGCTACGAAACACGGC
ATCAATGGCTTGGTACGGTCTTTGGCTGGCCTGGATCAGGAGTGCGGAAT
CCGTATCACAGCTGTTGCGCCGGGAGTTATCAAGACACCGTTGTGGACAG
ACCATCCTGAAAAGCTCAAGGTAGTGAACGAAGGGGCCGATGCATGGGTA
ACTCCAGACGAGGTAGCAGAGGTCATGTTGGCGCTTATCCAACAGGATAA
GGTGAGCGGTATCATTGGGGATCAGAGTGGTCGTGGTCCCCAGTACCCAG
TCAGTGGCGGAACTATCTTGGAGGTCTCCAAGACGGTTCGCTCGGTAGAG
CCCTTTAATGATGCTGGGCCTGGAAATCGACCAGGCAATACGGTATCTGA
TAACAGTGCGTTGATCAATGAAACACTTGGTCTGCTATCGCAGCGTGGAT
GGGGAATGCCCAAGTTGTAGGAATTAACCTGTCCTTCGCCAAGCTACTCC
TCGAACATGGATGTAACGTCCTGTTCGCCGATCTAGCTCTCCGTCCAGAG
GCACAGGCGATAGTGAATCAATACTCATCGAAGGCGAAGACGCCACGGGC
CGTCTTCCAGCGGACCGACGTGACCGATTGGCAACAGCTCGAGCGCATGT
TCGAGGTAGCAGAGCGGGAATTCGGAGAACTCGATGTTGTGTGTCCCGGC
GCAGGCATCTTTGAACCGATGTCCTTCGCCGTCCAAGGCCGATCTGCTAT
CGTGACGGGGGCAGGTTCAGCATTGGACCAACTTCTGGCGTCCTCCAGGA
ACCCCTGAAAGCCGAGACCCGCGATATGGAGGTCGCTATGCCCTTCTCGA
TATCAACCTCACGCATCCGATTCGCACCACACAGCTAGCCATTGCCCATT
TCCTGCGCCATGGGAATAAGCAGAGACGCAAACACATCGTTCATATCTCT
AGCATTGCCGGTCAAAACCCCAATTTCGTCGCCCCGATCTATGTCGCTAC
GAAACACGGCATCAATGGCTTGGTACGGTCTTTGGCTGGCCTGGATCAGG
AGTGCGGAATCCGTATCACAGCTGTTGCGCCGGGAGTTATCAAGACACCG
TTGTGGACAGACCATCCTGAAAAGCTCAAGGTAGTGAACGAAGGGGCCGA
TGCATGGGTAACTCCAGACGAGGTAGCAGAGGTCATGTTGGCGCTTATCC
AACAGGATAAGGTGAGCGGTATCATTGGGGATCAGAGTGGTCGTGGTCCC
CAGTACCCAGTCAGTGGCGGAACTATCTTGGAGGTCTCCAAGACGGTTCG
CTCGGTAGAGCCCTTTAATGATGCTGGGCCTGGAAATCGACCAGGCAATA
CGGTATCTGATAACAGTGCGTTGATCAATGAAACACTTGGTCTGCTATCG
CAGCGTGGATGGGGAATGCCCAAGTTGTAGGAATTAACCTGTCCTTCGCC
AAGCTACTCCTCGAACATGGATGTAACGTCCTGTTCGCCGATCTAGCTCT
CCGTCCAGAGGCACAGGCGATAGTGAATCAATACTCATCGAAGGCGAAGA
CGCCACGGGCCGTCTTCCAGCGGACCGACGTGACCGATTGGCAACAGCTC
GAGCGCATGTTCGAGGTAGCAGAGCGGGAATTCGGAGAACTCGATGTTGT
GTGTCCCGGCGCAGGCATCTTTGAACCGATGTCCTTCGCCGTCCAAGGCC
GATCTGCTATCGTGACGGGGGCAGGTTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:839218..840331 - |
|
