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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1577587..1578739- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_14605-T1 ID=CAN33_14605-T1|Name=CAN33_14605-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1153bp|location=Sequence derived from alignment at NKJJ01000010.1:1577587..1578739- (Aspergillus niger FDAARGOS_311)
ATGTCCGATGATGTCGACCTGCAACAGGAAATCCTCCAGCGGACTCTGCA
AGAGGTAGCGCGCGATGAAGGCGAGCACGACGCTAACCCGTGCGTGATCT
GTCTCGAACCCATCTCCGAAGCCGCCATCGCGGTGCCATGTCGCCATGCG
AACTTTGACTTTCTGTGTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTG
TCCGCTATGTATGTACATCCTCCGTGATAGACACCTGCCCGTATCCAGCA
AATATCTGACTAGATATAGGCAAGAGTGAGATCACATCAGTGAAATACAA
CCTCGAGGACATCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAA
GCGACGCCACAACCACTTCCTCAACCTCACACCTACCGACACCCTCACAT
CATCGCCCACCCCGCCGACCCCGTCGTCCGCGCAGCCCCCGTCCCCAACA
ACAACAACAACAACAGTCCCCCGACCCCCTCCGCCGCCGCCAACACATCT
ACCGTCACCAACTCTATTCCCTCCGCGTCGGCTCCAACCGTCTCTCACAA
TACCGCGAACTGACACCGGAGCGCTTTAATCGCGAAGAAGACCTCGTCTC
CCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGAGTTTCTCA
ACCCAGAATCAGGGGACCGACAAGGCGGAGGGGTTGCGCGCCCCGGTCAG
CAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTACTCGAGTA
TATCATTGCTATTCTACGGACTGTGGATATTAAGGGTAGTGCTGGGCAGG
CGGAGGAGCTGTTACGCGATTTTCTGGGCAGGGAGAATGCCCGGTTGTTT
CTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCTCTTGAGGA
CTGGGATCGGAATGTCCAGTATGAGGATACCGTGGGCGGTGGTGGTAATG
CTCATCCTTCGCGGCGGGAGCGCGAGGAGAGTAGAACTGCTACGCCGGTA
TATACCGATTACAGGGGACCTCGGTTTCCTAGTAGTTCTTCTGGGCGGGT
GAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCGTCTCGGGATGCTG
TGGCTCAGGCGAGACGGGTGCAATATGCCCGGGATCGGTATGTTCCCGAT
TGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1577587..1578739- >CAN33_14605-T1 ID=CAN33_14605-T1|Name=CAN33_14605-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2835bp|location=Sequence derived from alignment at NKJJ01000010.1:1577587..1578739- (Aspergillus niger FDAARGOS_311)
AAGACCTCGTCTCCCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAAGTA
TTCGAGTTTCTCAACCCAGAATCAGGGGACCGACAAGGCGGAGGGGTTGC
GCGCCCCGGTCAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGT
TTCTACTCGAGTATATCATTGCTATTCTACGGACTGTGGATATTAAGGGT
AGTGCTGGGCAGGCGGAGGAGCTGTTACGCGATTTTCTGGGCAGGGAGAA
TGCCCGGTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATA
TCTCTCTTGAGGACTGGGATCGGAATGTCCAGTATGAGGATACCGTGGGC
GGTGGTGGTAATGCTCATCCTTCGCGGCGGGAGCGCGAGGAGAGTAGAAC
TGCTACGCCGGTATATACCGATTACAGGGGACCTCGGTTTCCTAGTAGTT
CTTCTGGGCGGGTGAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCG
TCTCGGGATGCTGTGGCTCAGGCGAGACGGGTGCAATATGCCCGGGATCG
GTATGTTCCCGATTGAGCAAGAGTGAGATCACATCAGTGAAATACAACCT
CGAGGACATCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAAGCG
ACGCCACAACCACTTCCTCAACCTCACACCTACCGACACCCTCACATCAT
CGCCCACCCCGCCGACCCCGTCGTCCGCGCAGCCCCCATGTCCGATGATG
TCGACCTGCAACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCGC
GATGAAGGCGAGCACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCAT
CTCCGAAGCCGCCATCGCGGTGCCATGTCGCCATGCGAACTTTGACTTTC
TGTGTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTATAAGAC
CTCGTCTCCCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGA
GTTTCTCAACCCAGAATCAGGGGACCGACAAGGCGGAGGGGTTGCGCGCC
CCGGTCAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTA
CTCGAGTATATCATTGCTATTCTACGGACTGTGGATATTAAGGGTAGTGC
TGGGCAGGCGGAGGAGCTGTTACGCGATTTTCTGGGCAGGGAGAATGCCC
GGTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCT
CTTGAGGACTGGGATCGGAATGTCCAGTATGAGGATACCGTGGGCGGTGG
TGGTAATGCTCATCCTTCGCGGCGGGAGCGCGAGGAGAGTAGAACTGCTA
CGCCGGTATATACCGATTACAGGGGACCTCGGTTTCCTAGTAGTTCTTCT
GGGCGGGTGAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCGTCTCG
GGATGCTGTGGCTCAGGCGAGACGGGTGCAATATGCCCGGGATCGGTATG
TTCCCGATTGAGCAAGAGTGAGATCACATCAGTGAAATACAACCTCGAGG
ACATCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAAGCGACGCC
ACAACCACTTCCTCAACCTCACACCTACCGACACCCTCACATCATCGCCC
ACCCCGCCGACCCCGTCGTCCGCGCAGCCCCCATGTCCGATGATGTCGAC
CTGCAACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCGCGATGA
AGGCGAGCACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTCCG
AAGCCGCCATCGCGGTGCCATGTCGCCATGCGAACTTTGACTTTCTGTGT
TTGCTGAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTATAAGACCTCGT
CTCCCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGAGTTTC
TCAACCCAGAATCAGGGGACCGACAAGGCGGAGGGGTTGCGCGCCCCGGT
CAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTACTCGA
GTATATCATTGCTATTCTACGGACTGTGGATATTAAGGGTAGTGCTGGGC
AGGCGGAGGAGCTGTTACGCGATTTTCTGGGCAGGGAGAATGCCCGGTTG
TTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCTCTTGA
GGACTGGGATCGGAATGTCCAGTATGAGGATACCGTGGGCGGTGGTGGTA
ATGCTCATCCTTCGCGGCGGGAGCGCGAGGAGAGTAGAACTGCTACGCCG
GTATATACCGATTACAGGGGACCTCGGTTTCCTAGTAGTTCTTCTGGGCG
GGTGAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCGTCTCGGGATG
CTGTGGCTCAGGCGAGACGGGTGCAATATGCCCGGGATCGGTATGTTCCC
GATTGAGCAAGAGTGAGATCACATCAGTGAAATACAACCTCGAGGACATC
AACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAAGCGACGCCACAAC
CACTTCCTCAACCTCACACCTACCGACACCCTCACATCATCGCCCACCCC
GCCGACCCCGTCGTCCGCGCAGCCCCCATGTCCGATGATGTCGACCTGCA
ACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCGCGATGAAGGCG
AGCACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTCCGAAGCC
GCCATCGCGGTGCCATGTCGCCATGCGAACTTTGACTTTCTGTGTTTGCT
GAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF13920 |
| DBxref | PFAM:PF13923 |
| DBxref | PFAM:PF00097 |
| Product | Ring finger domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1577587..1578739 - |
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