You are here

Home

CAN33_14970-T1, CAN33_14970-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14970-T1
Unique NameCAN33_14970-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1815940..1816898+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14970-T1 ID=CAN33_14970-T1|Name=CAN33_14970-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=959bp|location=Sequence derived from alignment at NKJJ01000010.1:1815940..1816898+ (Aspergillus niger FDAARGOS_311)
ATGGTTGTCTGGATCTGCGTCAAAGCTGGTGACCTCCAAGGAATTTTCAA
CCAACCCGCAAAAGTATCAGGACAAGCGCACACTTGGCTTTGGCTTGCCA
CTTTCTCATCAACCACCAATTCCTGGCTTACCAGTACAATGAATATGTCA
GATTATTCACGGTTCGCCAAGACAGGGTATGTTAATATGGTGGCTCTTAG
TTAGCTCAGAGCATGCTACTAATACGACCTAGGAGCCGTGGACAATGGTC
CCAAGCATTAACTATCCCCGTTATCAAGACCATTTATGCTGTTCTTGGTC
TAGCTGTCGTTGGTTCTGGGCGGGTACTTTACGAGACAGACATATCCAGT
CCAGTCGATATGCTTCCGTACTGGGGCAACACGGGAGGCGGTCGCTTCCT
TGCCTTCGTCTGTGCTATTCTCTGGATGCTTGCTCAAATATCCTGTGACA
TTTCTGCAAATTCTATCCCCTTTGGTCATGATGTTATGTCATTTGTACCG
GCGTGGGTGACTGTCAGACGCGGTTCCCTTCTCTGTTTGCTCCTTGGTGC
ATGGGGTATGGTGCCATGGTTAATTGTCAACAGTGCTGACAAGTTTTTAA
GTTTCATGTCGGCCTATGGGGTGTGCATTAGCCCCATTTGCAGTATAATG
ATTGCGGACTATTTCCTCATCCGACGAGGAAAGTTGAACTTGTCTGACCT
ATACCACCCTCGCGGCTGCTACCGGTATAGAGCTGGTATAAATTGGCGTT
CGTTTGTGACTGAGTTCAGTTTCGTCGGAATCAATTTGCCAGGAGTCATC
AACAATGTCAACCCGAGCGTCCCCATTCCTAGTGGACTAATCCAGCTGTA
TAAGATCAATTGGTTTGTCAATACCCTGGGCTCCTTTGTTGTTTATTGGT
GTCTTTGTACCTTATGGCCACCTCTTGAGTCTCTTGATCCGAAAGTTCTG
CTTGAGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:1815940..1816898+

>CAN33_14970-T1 ID=CAN33_14970-T1|Name=CAN33_14970-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1806bp|location=Sequence derived from alignment at NKJJ01000010.1:1815940..1816898+ (Aspergillus niger FDAARGOS_311)
ATGGTTGTCTGGATCTGCGTCAAAGCTGGTGACCTCCAAGGAATTTTCAA
CCAACCCGCAAAAGTATCAGGACAAGCGCACACTTGGCTTTGGCTTGCCA
CTTTCTCATCAACCACCAATTCCTGGCTTACCAGTACAATGAATATGTCA
GATTATTCACGGTTCGCCAAGACAGGGAGCCGTGGACAATGGTCCCAAGC
ATTAACTATCCCCGTTATCAAGACCATTTATGCTGTTCTTGGTCTAGCTG
TCGTTGGTTCTGGGCGGGTACTTTACGAGACAGACATATCCAGTCCAGTC
GATATGCTTCCGTACTGGGGCAACACGGGAGGCGGTCGCTTCCTTGCCTT
CGTCTGTGCTATTCTCTGGATGCTTGCTCAAATATCCTGTGACATTTCTG
CAAATTCTATCCCCTTTGGTCATGATGTTATGTCATTTGTACCGGCGTGG
GTGACTGTCAGACGCGGTTCCCTTCTCTGTTTGCTCCTTGGTGCATGGGG
TATGGTGCCATGGTTAATTGTCAACAGTGCTGACAAGTTTTTAAGTTTCA
TGTCGGCCTATGGGGTGTGCATTAGCCCCATTTGCAGTATAATGATTGCG
GACTATTTCCTCATCCGACGAGGAAAGTTGAACTTGTCTGACCTATACCA
CCCTCGCGGCTGCTACCGGTATAGAGCTGGTATAAATTGGCGTTCGTTTG
TGACTGAGTTCAGTTTCGTCGGAATCAATTTGCCAGGAGTCATCAACAAT
GTCAACCCGAGCGTCCCCATTCCTAGTGGACTAATCCAGCTGTATAAGAT
CAATTGGTTTGTCAATACCCTGGGCTCCTTTGTTGTTTATTGGTGTCTTT
GTACCTTATGGCCACCTCTTGAGTCTCTTGATCCGAAAGTTCTGCTTGAG
TAGATGGTTGTCTGGATCTGCGTCAAAGCTGGTGACCTCCAAGGAATTTT
CAACCAACCCGCAAAAGTATCAGGACAAGCGCACACTTGGCTTTGGCTTG
CCACTTTCTCATCAACCACCAATTCCTGGCTTACCAGTACAATGAATATG
TCAGATTATTCACGGTTCGCCAAGACAGGGAGCCGTGGACAATGGTCCCA
AGCATTAACTATCCCCGTTATCAAGACCATTTATGCTGTTCTTGGTCTAG
CTGTCGTTGGTTCTGGGCGGGTACTTTACGAGACAGACATATCCAGTCCA
GTCGATATGCTTCCGTACTGGGGCAACACGGGAGGCGGTCGCTTCCTTGC
CTTCGTCTGTGCTATTCTCTGGATGCTTGCTCAAATATCCTGTGACATTT
CTGCAAATTCTATCCCCTTTGGTCATGATGTTATGTCATTTGTACCGGCG
TGGGTGACTGTCAGACGCGGTTCCCTTCTCTGTTTGCTCCTTGGTGCATG
GGGTATGGTGCCATGGTTAATTGTCAACAGTGCTGACAAGTTTTTAAGTT
TCATGTCGGCCTATGGGGTGTGCATTAGCCCCATTTGCAGTATAATGATT
GCGGACTATTTCCTCATCCGACGAGGAAAGTTGAACTTGTCTGACCTATA
CCACCCTCGCGGCTGCTACCGGTATAGAGCTGGTATAAATTGGCGTTCGT
TTGTGACTGAGTTCAGTTTCGTCGGAATCAATTTGCCAGGAGTCATCAAC
AATGTCAACCCGAGCGTCCCCATTCCTAGTGGACTAATCCAGCTGTATAA
GATCAATTGGTTTGTCAATACCCTGGGCTCCTTTGTTGTTTATTGGTGTC
TTTGTACCTTATGGCCACCTCTTGAGTCTCTTGATCCGAAAGTTCTGCTT
GAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14970CAN33_14970Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14970-T1.exon1CAN33_14970-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_14970-T1.exon2CAN33_14970-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14970-T1.cdsCAN33_14970-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14970-T1CAN33_14970-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001248
DBxrefInterPro:IPR038271
DBxrefPFAM:PF02133
ProductPermease for cytosine/purines uracil thiamine allantoin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1815940..1816898 +
Powered by Drupal