You are here

Home

CAN33_15150-T1, CAN33_15150-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15150-T1
Unique NameCAN33_15150-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1940390..1940950+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15150-T1 ID=CAN33_15150-T1|Name=CAN33_15150-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=561bp|location=Sequence derived from alignment at NKJJ01000010.1:1940390..1940950+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCTCTCAATAGCACAATCGTCCCTATTACCGGCGCCAACCAGGG
TCTAGGCTTTGCGGTCGCCAAAAAGCTAGCCACCGATCACCCGGGATACC
ATGTGCTCATGGGCTACCGCGATGCTACTAAGGGCGAAGAGGCCATTGCC
AAGCTAAAAAGCCGAGGACTGACCGTCGAGGGAGTGATGATCGACGTGAC
CGACGACACCTCCATGTAGAGGGCCGCCGAACAGGCTTCAGCCCAGTTCG
GTCGGCTAGACGTCCTCATCAACAACGCCGGAGTGATCTCCGAGGGACGC
TCACCCGAAGGCACCTCCCTCCGCCATACCTGGCAGACTGGCTTCGACAT
CAACATCACGGCCCACGTCATCACTCCAGAAGCCTTTGTGCCGCTCTTGG
AGAAGGCCGCTCTGCCGCTAGTGGTCTTTGTGTCCTCAGCTCTAGGATCA
TGTCCTGGCCGGTTGGACCCCAACGACCAATTTGCTGCCTTCCGATTCCC
CGCCTACCGCAGCACCAAGGTGGCGCTCAACATGGTCGCCTGTCACTATG
CCAATCTATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:1940390..1940950+

>CAN33_15150-T1 ID=CAN33_15150-T1|Name=CAN33_15150-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1074bp|location=Sequence derived from alignment at NKJJ01000010.1:1940390..1940950+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCTCTCAATAGCACAATCGTCCCTATTACCGGCGCCAACCAGGG
TCTAGGCTTTGCGGTCGCCAAAAAGCTAGCCACCGATCACCCGGGATACC
ATGTGCTCATGGGCTACCGCGATGCTACTAAGGGCGAAGAGGCCATTGCC
AAGCTAAAAAGCCGAGGACTGACCGTCGAGGGAGTGATGATCGACAGGGC
CGCCGAACAGGCTTCAGCCCAGTTCGGTCGGCTAGACGTCCTCATCAACA
ACGCCGGAGTGATCTCCGAGGGACGCTCACCCGAAGGCACCTCCCTCCGC
CATACCTGGCAGACTGGCTTCGACATCAACATCACGGCCCACGTCATCAC
TCCAGAAGCCTTTGTGCCGCTCTTGGAGAAGGCCGCTCTGCCGCTAGTGG
TCTTTGTGTCCTCAGCTCTAGGATCATGTCCTGGCCGGTTGGACCCCAAC
GACCAATTTGCTGCCTTCCGATTCCCCGCCTACCGCAGCACCAAGGTGGC
GCTCAACATGGTCGCCTGTCACTATGCCAATCTATAGATGGCTTCTCTCA
ATAGCACAATCGTCCCTATTACCGGCGCCAACCAGGGTCTAGGCTTTGCG
GTCGCCAAAAAGCTAGCCACCGATCACCCGGGATACCATGTGCTCATGGG
CTACCGCGATGCTACTAAGGGCGAAGAGGCCATTGCCAAGCTAAAAAGCC
GAGGACTGACCGTCGAGGGAGTGATGATCGACAGGGCCGCCGAACAGGCT
TCAGCCCAGTTCGGTCGGCTAGACGTCCTCATCAACAACGCCGGAGTGAT
CTCCGAGGGACGCTCACCCGAAGGCACCTCCCTCCGCCATACCTGGCAGA
CTGGCTTCGACATCAACATCACGGCCCACGTCATCACTCCAGAAGCCTTT
GTGCCGCTCTTGGAGAAGGCCGCTCTGCCGCTAGTGGTCTTTGTGTCCTC
AGCTCTAGGATCATGTCCTGGCCGGTTGGACCCCAACGACCAATTTGCTG
CCTTCCGATTCCCCGCCTACCGCAGCACCAAGGTGGCGCTCAACATGGTC
GCCTGTCACTATGCCAATCTATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15150CAN33_15150Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15150-T1.exon1CAN33_15150-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_15150-T1.exon2CAN33_15150-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15150-T1.cdsCAN33_15150-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15150-T1CAN33_15150-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1940390..1940950 +
Powered by Drupal