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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:2120866..2121853+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_15485-T1 ID=CAN33_15485-T1|Name=CAN33_15485-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=988bp|location=Sequence derived from alignment at NKJJ01000010.1:2120866..2121853+ (Aspergillus niger FDAARGOS_311)
ATGCCGGTACTATCCCATTTTCTATCTTCCTCTCCATGAAACTCTCCAGA
CAAATTGACTAATCCCATTCTAGGCATACCACTCCATCTTCCTCGAGGAT
CGGGATGTCCCCGTAATAGGTACGCCGCACTCTCCCCGCCATACACTTAC
CTAGCTACACCCCATACATCGAGAGCTACCTCCACCATACACTCCAGCCC
ACCTCCGTATCAGCAGTCCAACTAATATCCATTGATAGGAAACTTCCCCA
TCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCG
CTCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTA
CGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCC
GTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACC
TTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCG
GGAGGCTGAGAAGGTATGCTTTGCTTGCCCTTGTCGTGCTGAGTTGTGAG
GGGTTGGTGGTGGCTGTTCGATGTTAGGTGTTGCTTAATGAGGTGAGCGT
GCTAATGGGTACTGTTGCAGGCATTGATCAACGTTGCGCTCGACCACTTC
GCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCC
CCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACGTTTATTCTTTTT
CGGCCCTCTTCGACTGAGGTCTGTGTTGGAGAGTGCTGATTTGGCTGTAA
TAGGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTA
GATTATACCCCGGTGGTGAAGGGCCTTCGAAGGTATGTATTTCTTTCTTT
CTACCCTGCAATTACAGATGGGAGGCTAATTAGGGTGTAGTGGTGGCTTA
GTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:2120866..2121853+ >CAN33_15485-T1 ID=CAN33_15485-T1|Name=CAN33_15485-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2592bp|location=Sequence derived from alignment at NKJJ01000010.1:2120866..2121853+ (Aspergillus niger FDAARGOS_311)
ATGCCGGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCATCCT
CTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCC
CCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTG
GGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATTGAT
CAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTT
TGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTG
AGACAGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGC
TAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTTCG
CCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGATGCCGGCATACCACTCC
ATCTTCCTCGAGGATCGGGATGTCCCCATCCTCTCCCTCTTCCGCGCCAA
TGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCA
TCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGT
ATGGCTATGCGGGAGGCTGAGAAGGCATTGATCAACGTTGCGCTCGACCA
CTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGG
CGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACCTTTCGCAA
GTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGG
TGAAGGGCCTTCGAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGG
GAAAGAGCTTCTAGATGCCGGCATACCACTCCATCTTCCTCGAGGATCGG
GATGTCCCCATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTT
CGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCA
TCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCT
GAGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGA
CGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGG
ATGCGGAGACGTTGAGACAGTACCTTTCGCAAGTTAGGCAGGAGATCGCG
GTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGTG
GTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGATGC
CGGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCATCCTCTCC
CTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGC
CGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGA
AGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATTGATCAAC
GTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAA
CCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGAC
AGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGA
TTATACCCCGGTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTTCGCCAA
GAGAAAGTTCATGGGAAAGAGCTTCTAGATGCCGGCATACCACTCCATCT
TCCTCGAGGATCGGGATGTCCCCATCCTCTCCCTCTTCCGCGCCAATGTC
CTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTA
CGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGG
CTATGCGGGAGGCTGAGAAGGCATTGATCAACGTTGCGCTCGACCACTTC
GCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCC
CCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACCTTTCGCAAGTTA
GGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAA
GGGCCTTCGAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAA
GAGCTTCTAGATGCCGGCATACCACTCCATCTTCCTCGAGGATCGGGATG
TCCCCATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAA
ATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAG
CGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGA
AGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTG
TCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGC
GGAGACGTTGAGACAGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTC
GGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGTGGTGG
CTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005856 | cytoskeleton |
| GO:0005885 | Arp2/3 protein complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030833 | regulation of actin filament polymerization |
| GO:0034314 | Arp2/3 complex-mediated actin nucleation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036753 |
| DBxref | InterPro:IPR007204 |
| DBxref | PFAM:PF04062 |
| Product | ARP2/3 complex ARPC3 (21 kDa) subunit family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:2120866..2121853 + |
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