|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:2310424..2311537+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_15820-T1 ID=CAN33_15820-T1|Name=CAN33_15820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1114bp|location=Sequence derived from alignment at NKJJ01000010.1:2310424..2311537+ (Aspergillus niger FDAARGOS_311)
ATGCCCCCGTTCGAGAAGCTGAGGAAAATGCATAGCCCTTTCCCGGGCTC
GTTTCGCAGTAGGTTTATTCCCGCTCTCGATCATCGCACAGCGACATTGG
CTCTGAATTCTGGACTTGGCACGAGAGACGGTGACTGACCAACGCCTCAT
ACAGGTGAATGTAACAAAGCCGCCCGGATTCTAGACGCCTTTACGAACCC
ATTGAACCCGGATGGCCGCGACAGTCTCATTCCCCCGAAAGTCCTCGGAG
CTGCCAAGGCAAGTGGCATTACCACGGTCGCAAATAATCCTTACGCGGTT
GACTGACCAGCCAAGGACAGGGCTTCGCAATTTTCTCCGTCTCGAAGCTG
GGCATCGTTGGATCGGTACGAATGGGCTCGGGCATTTTAATCGCGCGCCT
CGAAGACGGCGACTGGTCTGCACCTTCAGCCATCCTGACAGCAGGAGTCG
GAGTAGGATCGCAGCTGGGCGTGGAGGTGACCAATTTCGTCTTCGTCCTC
AACACAACCAGCGCCGTTCGCACATTTGCCCAGCTGGGGAGTTTGTCTCT
GGGCAAGACAGCTTCATTTGCCATGGGCCCATCGGGGAGATTTGGCGAAG
TCAACGGAGTGGTCAGTGCCGGTGGGATGGCGGGCATCTTTGTCTACGGC
CATAATCAAGGTTTTTTTGGCGGCTTCAGTACGGAAGGGAGCATGATATT
CGAACGCCGCGGCGCAAACCAGAAGTTATATGGGAAGAAGATCAAGGCGC
GCGATTTAATCGAGGGCCAGTTCCCACCCCCGAGGAGGCGGACGAGTTGA
TGAACGTCCTGCGCTCCGATCTGTTCGCGCCTCGACCGGAATTGTACGCT
ACCTCTTCTGCTTCCACCAAAGGTTCCATTTCTTCCGAACGGCCATTGCA
GTCCTCTGCCGGCACAGACATTCAGAAAAAGCCAATTGAAATGCCTGCTG
ATGAGATCGTCCAATTGCCCGCCGAACTACCCGCCGAATTCATCGCTGAG
CTCCCAGCAGAGGTGGTGCCGGACATCTACTACGACAAATCGGTCGGCTC
GTCGGAGACGCTGCTGCCAGAGTTGCCATCCGAGCCAGCCTCGGTGCGTC
CAGCAAAGAGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:2310424..2311537+ >CAN33_15820-T1 ID=CAN33_15820-T1|Name=CAN33_15820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3492bp|location=Sequence derived from alignment at NKJJ01000010.1:2310424..2311537+ (Aspergillus niger FDAARGOS_311)
ATGCCCCCGTTCGAGAAGCTGAGGAAAATGCATAGCCCTTTCCCGGGCTC
GTTTCGCAGTGAATGTAACAAAGCCGCCCGGATTCTAGACGCCTTTACGA
ACCCATTGAACCCGGATGGCCGCGACAGTCTCATTCCCCCGAAAGTCCTC
GGAGCTGCCAAGGCAAGACAGGGCTTCGCAATTTTCTCCGTCTCGAAGCT
GGGCATCGTTGGATCGGTACGAATGGGCTCGGGCATTTTAATCGCGCGCC
TCGAAGACGGCGACTGGTCTGCACCTTCAGCCATCCTGACAGCAGGAGTC
GGAGTAGGATCGCAGCTGGGCGTGGAGGTGACCAATTTCGTCTTCGTCCT
CAACACAACCAGCGCCGTTCGCACATTTGCCCAGCTGGGGAGTTTGTCTC
TGGGCAAGACAGCTTCATTTGCCATGGGCCCATCGGGGAGATTTGGCGAA
GTCAACGGAGTGGTCAGTGCCGGTGGGATGGCGGGCATCTTTGTCTACGG
CCATAATCAAGGTTTTTTTGGCGGCTTCATTCCCACCCCCGAGGAGGCGG
ACGAGTTGATGAACGTCCTGCGCTCCGATCTGTTCGCGCCTCGACCGGAA
TTGTACGCTACCTCTTCTGCTTCCACCAAAGGTTCCATTTCTTCCGAACG
GCCATTGCAGTCCTCTGCCGGCACAGACATTCAGAAAAAGCCAATTGAAA
TGCCTGCTGATGAGATCGTCCAATTGCCCGCCGAACTACCCGCCGAATTC
ATCGCTGAGCTCCCAGCAGAGGTGGTGCCGGACATCTACTACGACAAATC
GGTCGGCTCGTCGGAGACGCTGCTGCCAGAGTTGCCATCCGAGCCAGCCT
CGGTGCGTCCAGCAAAGAGTTGAATGCCCCCGTTCGAGAAGCTGAGGAAA
ATGCATAGCCCTTTCCCGGGCTCGTTTCGCAGTGAATGTAACAAAGCCGC
CCGGATTCTAGACGCCTTTACGAACCCATTGAACCCGGATGGCCGCGACA
GTCTCATTCCCCCGAAAGTCCTCGGAGCTGCCAAGGCAAGACAGGGCTTC
GCAATTTTCTCCGTCTCGAAGCTGGGCATCGTTGGATCGGTACGAATGGG
CTCGGGCATTTTAATCGCGCGCCTCGAAGACGGCGACTGGTCTGCACCTT
CAGCCATCCTGACAGCAGGAGTCGGAGTAGGATCGCAGCTGGGCGTGGAG
GTGACCAATTTCGTCTTCGTCCTCAACACAACCAGCGCCGTTCGCACATT
TGCCCAGCTGGGGAGTTTGTCTCTGGGCAAGACAGCTTCATTTGCCATGG
GCCCATCGGGGAGATTTGGCGAAGTCAACGGAGTGGTCAGTGCCGGTGGG
ATGGCGGGCATCTTTGTCTACGGCCATAATCAAGGTTTTTTTGGCGGCTT
CATTCCCACCCCCGAGGAGGCGGACGAGTTGATGAACGTCCTGCGCTCCG
ATCTGTTCGCGCCTCGACCGGAATTGTACGCTACCTCTTCTGCTTCCACC
AAAGGTTCCATTTCTTCCGAACGGCCATTGCAGTCCTCTGCCGGCACAGA
CATTCAGAAAAAGCCAATTGAAATGCCTGCTGATGAGATCGTCCAATTGC
CCGCCGAACTACCCGCCGAATTCATCGCTGAGCTCCCAGCAGAGGTGGTG
CCGGACATCTACTACGACAAATCGGTCGGCTCGTCGGAGACGCTGCTGCC
AGAGTTGCCATCCGAGCCAGCCTCGGTGCGTCCAGCAAAGAGTTGAATGC
CCCCGTTCGAGAAGCTGAGGAAAATGCATAGCCCTTTCCCGGGCTCGTTT
CGCAGTGAATGTAACAAAGCCGCCCGGATTCTAGACGCCTTTACGAACCC
ATTGAACCCGGATGGCCGCGACAGTCTCATTCCCCCGAAAGTCCTCGGAG
CTGCCAAGGCAAGACAGGGCTTCGCAATTTTCTCCGTCTCGAAGCTGGGC
ATCGTTGGATCGGTACGAATGGGCTCGGGCATTTTAATCGCGCGCCTCGA
AGACGGCGACTGGTCTGCACCTTCAGCCATCCTGACAGCAGGAGTCGGAG
TAGGATCGCAGCTGGGCGTGGAGGTGACCAATTTCGTCTTCGTCCTCAAC
ACAACCAGCGCCGTTCGCACATTTGCCCAGCTGGGGAGTTTGTCTCTGGG
CAAGACAGCTTCATTTGCCATGGGCCCATCGGGGAGATTTGGCGAAGTCA
ACGGAGTGGTCAGTGCCGGTGGGATGGCGGGCATCTTTGTCTACGGCCAT
AATCAAGGTTTTTTTGGCGGCTTCATTCCCACCCCCGAGGAGGCGGACGA
GTTGATGAACGTCCTGCGCTCCGATCTGTTCGCGCCTCGACCGGAATTGT
ACGCTACCTCTTCTGCTTCCACCAAAGGTTCCATTTCTTCCGAACGGCCA
TTGCAGTCCTCTGCCGGCACAGACATTCAGAAAAAGCCAATTGAAATGCC
TGCTGATGAGATCGTCCAATTGCCCGCCGAACTACCCGCCGAATTCATCG
CTGAGCTCCCAGCAGAGGTGGTGCCGGACATCTACTACGACAAATCGGTC
GGCTCGTCGGAGACGCTGCTGCCAGAGTTGCCATCCGAGCCAGCCTCGGT
GCGTCCAGCAAAGAGTTGAATGCCCCCGTTCGAGAAGCTGAGGAAAATGC
ATAGCCCTTTCCCGGGCTCGTTTCGCAGTGAATGTAACAAAGCCGCCCGG
ATTCTAGACGCCTTTACGAACCCATTGAACCCGGATGGCCGCGACAGTCT
CATTCCCCCGAAAGTCCTCGGAGCTGCCAAGGCAAGACAGGGCTTCGCAA
TTTTCTCCGTCTCGAAGCTGGGCATCGTTGGATCGGTACGAATGGGCTCG
GGCATTTTAATCGCGCGCCTCGAAGACGGCGACTGGTCTGCACCTTCAGC
CATCCTGACAGCAGGAGTCGGAGTAGGATCGCAGCTGGGCGTGGAGGTGA
CCAATTTCGTCTTCGTCCTCAACACAACCAGCGCCGTTCGCACATTTGCC
CAGCTGGGGAGTTTGTCTCTGGGCAAGACAGCTTCATTTGCCATGGGCCC
ATCGGGGAGATTTGGCGAAGTCAACGGAGTGGTCAGTGCCGGTGGGATGG
CGGGCATCTTTGTCTACGGCCATAATCAAGGTTTTTTTGGCGGCTTCATT
CCCACCCCCGAGGAGGCGGACGAGTTGATGAACGTCCTGCGCTCCGATCT
GTTCGCGCCTCGACCGGAATTGTACGCTACCTCTTCTGCTTCCACCAAAG
GTTCCATTTCTTCCGAACGGCCATTGCAGTCCTCTGCCGGCACAGACATT
CAGAAAAAGCCAATTGAAATGCCTGCTGATGAGATCGTCCAATTGCCCGC
CGAACTACCCGCCGAATTCATCGCTGAGCTCCCAGCAGAGGTGGTGCCGG
ACATCTACTACGACAAATCGGTCGGCTCGTCGGAGACGCTGCTGCCAGAG
TTGCCATCCGAGCCAGCCTCGGTGCGTCCAGCAAAGAGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007461 |
| DBxref | PFAM:PF04366 |
| Product | Family of unknown function (DUF500) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:2310424..2311537 + |
|
