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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:960393..962186- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_1625-T1 ID=CAN33_1625-T1|Name=CAN33_1625-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1794bp|location=Sequence derived from alignment at NKJJ01000004.1:960393..962186- (Aspergillus niger FDAARGOS_311)
ATGCGTGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGC
CCTTCCCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTT
TCCTCGCATTCTCGAGATCTGTTGCCAGCTATACCCATCCTCACCATGCA
TCCGCCATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTT
CAAGGAGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTC
TACATAGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCAC
ATCGCAAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGA
TCCAGGCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCT
ACTCTGACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTT
GAAGGCGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGG
CACATACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTG
CTCAAGAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCA
AACCTTCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCG
CATTTTCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATAT
CCGTCGTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATG
AGCGATGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGG
ACCTCCTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACC
TTGGTGGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTT
GCTGTGGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAA
CCTCAACTATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACG
CCATCAGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGC
ACCAACCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGT
CGATGGCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTG
TCACTGGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAAC
AATGGTATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGA
GCTCTGCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTG
GCTTCATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGC
GCGAAGCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGT
CGTATTTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGGTAAGTCC
TCGGTCAGACATTATTCTTCTTCCTATCCTGTACTCACTACGTTTGCAGC
GGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGAT
CGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGC
GGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCG
GTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCA
GACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGG
TAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:960393..962186- >CAN33_1625-T1 ID=CAN33_1625-T1|Name=CAN33_1625-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3474bp|location=Sequence derived from alignment at NKJJ01000004.1:960393..962186- (Aspergillus niger FDAARGOS_311)
CGGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGA
TCGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGG
CGGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGC
GGTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGC
AGACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGG
GTAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCG
TGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTC
CCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTC
GCATTCTCGAGATCTGTTGCCAGCTATACCCATCCTCACCATGCATCCGC
CATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGG
AGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACAT
AGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGC
AAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAG
GCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCT
GACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGG
CGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACAT
ACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAA
GAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCT
TCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTT
TCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTC
GTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGA
TGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTC
CTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGT
GGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGT
GGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCA
ACTATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACGCCATC
AGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAA
CCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATG
GCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTGTCACT
GGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGG
TATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCT
GCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTC
ATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAA
GCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTAT
TTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGCGGTCGCGCTTAC
TCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGATCGGTGTCATGGG
CTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGCGGACAGCGGACC
CCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCGGTCTTTTCCTCG
GCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCAGACGAGACGGTT
CCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGGTAGATGCTGATG
TGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCGTGCTCCGTCTCCG
CTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTCCCTCCCGCTGTCT
ACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTCGCATTCTCGAGAT
CTGTTGCCAGCTATACCCATCCTCACCATGCATCCGCCATATCGGCTCTT
CCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGGAGAACGCCCAGCA
AATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACATAGCACAATTTCCC
AAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGCAAGAGGGAAAATG
CTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAGGCACCTCGTTCCT
AGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCTGACGACGTCCCAG
CAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGGCGTCACCTGTATG
ATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACATACTACCCCATCAC
CGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAAGAAAACAAGCTTC
CCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCTTCCCCACCAAGCA
GATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTTTCTTCAACCAAGC
CCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTCGTCATGGGCCCCT
GCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGATGAGACGATCATT
GTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTCCTCTTGTCAAAGC
TGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGTGGGGGTCAGCTTC
ATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGTGGACGATGCGCAT
GCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCAACTATCCAAAAAC
GACCGTTCCTCTTAAGAACATCCCCGGTGACGCCATCAGAGAGCCGTTGT
ATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAACCTCCGGCGCCAG
ATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATGGCAGTGAGTTTGC
CGAATTCAAGCGGGACTATGGCACGACACTTGTCACTGGCTTTGCTCGTA
TCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGGTATCCTGTTCTCC
GAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCTGCGCGCAACGTAA
AATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTCATGGTTGGCGCAG
ATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAAGCTCGTTACGGCC
GTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTATTTGGTTCCAGCGC
TGGCGCGGGCAACTATGGAATGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016874 | ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029045 |
| DBxref | InterPro:IPR011762 |
| DBxref | InterPro:IPR011763 |
| DBxref | InterPro:IPR034733 |
| DBxref | PFAM:PF01039 |
| Product | Carboxyl transferase domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:960393..962186 - |
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