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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:199609..200200- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16435-T1 ID=CAN33_16435-T1|Name=CAN33_16435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=592bp|location=Sequence derived from alignment at NKJJ01000011.1:199609..200200- (Aspergillus niger FDAARGOS_311)
ATGATTTGCAACACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCA
AGCAAGCCCTATCGCCAAGCGCGATGCTGCGACAGTGCTTTCCGACCTTG
AGACTATTGGAAATGACGTTACTACTCTCAAGACGGACGTTACCAACTGG
ACCGGAGACCTTCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGT
CAAAAGTGCTTTGGACACGGCCATAACTGATACGGAGGCCGCTTCCGCAT
TCACCGATACGGAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCC
ACGATCATTATAGCAACCCTAGATGAGCTTATCTCCAAGGTAAATTCAAG
AAAGCCGACGAGCTTCATTGTTCTGTTGTTGCAGGACTGATGCACAGTTC
TAGGAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACTTTGCTCTCCTC
CCTGGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGG
CGAAGGCCACCACGACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCC
ATCGACGCGGCATTTTCGAGTGCAATTGCTGCCTATGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:199609..200200- >CAN33_16435-T1 ID=CAN33_16435-T1|Name=CAN33_16435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1056bp|location=Sequence derived from alignment at NKJJ01000011.1:199609..200200- (Aspergillus niger FDAARGOS_311)
GAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACTTTGCTCTCCTCCCT
GGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGGCGA
AGGCCACCACGACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCCATC
GACGCGGCATTTTCGAGTGCAATTGCTGCCTATGAGTAAATGATTTGCAA
CACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCAAGCAAGCCCTA
TCGCCAAGCGCGATGCTGCGACAGTGCTTTCCGACCTTGAGACTATTGGA
AATGACGTTACTACTCTCAAGACGGACGTTACCAACTGGACCGGAGACCT
TCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGTCAAAAGTGCTT
TGGACACGGCCATAACTGATACGGAGGCCGCTTCCGCATTCACCGATACG
GAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCCACGATCATTAT
AGCAACCCTAGATGAGCTTATCTCCAAGGAGTCTACTGCGGCATCTGCGG
GCGTCACTTCCACTTTGCTCTCCTCCCTGGAGACACTCAAGACCGACACG
GACGAGCTGGGGGCGGACCTGGAGGCGAAGGCCACCACGACGGATGCGGC
AACCATTGCCTCGACTCTTGCCTCCATCGACGCGGCATTTTCGAGTGCAA
TTGCTGCCTATGAGTAAATGATTTGCAACACTTTGCTCGTCGTTGCATTG
AGTCTGGGTCTCGTCCAAGCAAGCCCTATCGCCAAGCGCGATGCTGCGAC
AGTGCTTTCCGACCTTGAGACTATTGGAAATGACGTTACTACTCTCAAGA
CGGACGTTACCAACTGGACCGGAGACCTTCTCGCAGCTCTAGGCATTTTG
TCCGATTACAACACCGTCAAAAGTGCTTTGGACACGGCCATAACTGATAC
GGAGGCCGCTTCCGCATTCACCGATACGGAGAGTTCCAGCATCACAACTG
AAGTAACTTCTCTAGCCACGATCATTATAGCAACCCTAGATGAGCTTATC
TCCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR021054 |
| DBxref | PFAM:PF12296 |
| Product | Hydrophobic surface binding protein A family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:199609..200200 - |
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