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CAN33_16475-T1, CAN33_16475-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16475-T1
Unique NameCAN33_16475-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:216975..218693+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16475-T1 ID=CAN33_16475-T1|Name=CAN33_16475-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1719bp|location=Sequence derived from alignment at NKJJ01000011.1:216975..218693+ (Aspergillus niger FDAARGOS_311)
ATGCCTTCAATCAAAGTTGCTGAGTACCTCTTCCGTCGGCTCAAAGACCT
GGGCGTAGCTTCCGTCCACGGTGTGCCGGGCGATTTTAACCTCACTTTGC
TCGACTATGTGGAGCCCGCCGGTTTGCGATGGGTCGGTAACGCGAACGAG
CTAAACGCCGCCTACGCCGCCGACGGGTACGCCCGAATCAAAGGCATTGG
CGCGGTTGTCACCACCTTCGGTGTTGGGGAGCTGTCTGCTGTGAACGCGA
TCGCTGGAGCCTACACTGAACGTGCGCCCGTCGTGCACATTGTGGGAACA
CCAGCCCGGGATTTGCAGGAGGGACGGAAATTGGTCCACCATACCTTCAA
TGATGGCGAATATGGGCGGTTTGCTAAGATCTACGAACACTTGACTATCG
CTCAGGCCAGCCTGCGAGATCCACGAACCGCGCCTGCGCAGATCGACGAG
GTACTGCGACAATGTCTCCTTCACAGCCGACCGGTCTATATCGAGGTGCC
AATGGATATGGTGCACCAGTATGTGTCAGATGAAAGACTCGCGCTCGCCG
TCAGCACACCCGACCCTGTTCCCTCCCAGACCCAAGATGATGTCGTGGTG
CGAATTCTGGAACGTATATATGCAGCAAAGCAGCCGATCATTCTCGTCGA
TGGCGAAATCAGACCCATAGGAATCTTGGAAGAGGTCCAGAAGATCATCA
ATGCCACGAACTTCCCGACCTGGACGACCAATTTCGGAAAAGGCCTGGTG
GATGATACACGGCCAAACTTCCATGGCATCTACCGCGGCAACTATGACCC
CACTGAAGTGCAAGACTTCTACAATGGGGCAGACTTGGTGTTGTGTTTCG
GGCCACACTTCAGCTCCACCAATTCCTACTTCTATCAGATTATTCCTAAG
CCCGAAGTTGCTATTTTGTTCACCGATACCGAAGTTAAGTTTGGAACGGA
GATCATTCGTGACATTCCCGCCAAGCTTACCACGTCTCGCCTCATCGAGA
CGATCGACCTCAACCGAATTCATCGCTATGACCCCTACCCTAGTTTGCCC
CGTGACGAACTCGTTCCATTCTCCGAAGTAGAAGGAGATAAACCACTTTC
CCAAGATAAATTGTGGCGAGTGTTTGCGAACTTCCTTCGTCCAGGCGACA
TCCTACTGGGAGAAACAGGCACGGCAGGATATGGTGTCCGCGAGATGGCG
TTTCCCAAGCACACCCGCCTTTTCGCACCCGTGACCTGGCTATCTATCGG
GTATATGCTACCAGGAGCACAGGGAGCCGCACTTGCGCAAGAAGAATTGA
TGGCATCAGACAACTACCACGGCATTAAAGATGCGCGCACAGTCCTTCTC
ATCGGCGATGGCAGTTTTCAAATGACCGCGCAGGAATTATCAACAATCAT
TCGACTCAAGCTGAACGTCGTGGTCTTCCTCATCAATAACGACGGATACA
CGATCGAGCGCTGCATCCATGGCCGGAAACAGGGATACAACGATGTGTCG
CGATGGAGATATCTACAGGCCCCCAGCTTCTTTGGAGCGAGTGAAGACAC
GTTCACTGCCTCAGTTAGAACCTGGAAGGAGCTACAGGATGTTTTCTCGA
ATGATGTTGTCAGTAACGGGAAAGAGCTGCGGATGGTTGAGATAATGCTA
GACCGTGAGGACGCTCCTATTGGACCTTTGTCGATGCTTATAGATCAGCA
AAGACGTACCGGCGCTTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:216975..218693+

>CAN33_16475-T1 ID=CAN33_16475-T1|Name=CAN33_16475-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1719bp|location=Sequence derived from alignment at NKJJ01000011.1:216975..218693+ (Aspergillus niger FDAARGOS_311)
ATGCCTTCAATCAAAGTTGCTGAGTACCTCTTCCGTCGGCTCAAAGACCT
GGGCGTAGCTTCCGTCCACGGTGTGCCGGGCGATTTTAACCTCACTTTGC
TCGACTATGTGGAGCCCGCCGGTTTGCGATGGGTCGGTAACGCGAACGAG
CTAAACGCCGCCTACGCCGCCGACGGGTACGCCCGAATCAAAGGCATTGG
CGCGGTTGTCACCACCTTCGGTGTTGGGGAGCTGTCTGCTGTGAACGCGA
TCGCTGGAGCCTACACTGAACGTGCGCCCGTCGTGCACATTGTGGGAACA
CCAGCCCGGGATTTGCAGGAGGGACGGAAATTGGTCCACCATACCTTCAA
TGATGGCGAATATGGGCGGTTTGCTAAGATCTACGAACACTTGACTATCG
CTCAGGCCAGCCTGCGAGATCCACGAACCGCGCCTGCGCAGATCGACGAG
GTACTGCGACAATGTCTCCTTCACAGCCGACCGGTCTATATCGAGGTGCC
AATGGATATGGTGCACCAGTATGTGTCAGATGAAAGACTCGCGCTCGCCG
TCAGCACACCCGACCCTGTTCCCTCCCAGACCCAAGATGATGTCGTGGTG
CGAATTCTGGAACGTATATATGCAGCAAAGCAGCCGATCATTCTCGTCGA
TGGCGAAATCAGACCCATAGGAATCTTGGAAGAGGTCCAGAAGATCATCA
ATGCCACGAACTTCCCGACCTGGACGACCAATTTCGGAAAAGGCCTGGTG
GATGATACACGGCCAAACTTCCATGGCATCTACCGCGGCAACTATGACCC
CACTGAAGTGCAAGACTTCTACAATGGGGCAGACTTGGTGTTGTGTTTCG
GGCCACACTTCAGCTCCACCAATTCCTACTTCTATCAGATTATTCCTAAG
CCCGAAGTTGCTATTTTGTTCACCGATACCGAAGTTAAGTTTGGAACGGA
GATCATTCGTGACATTCCCGCCAAGCTTACCACGTCTCGCCTCATCGAGA
CGATCGACCTCAACCGAATTCATCGCTATGACCCCTACCCTAGTTTGCCC
CGTGACGAACTCGTTCCATTCTCCGAAGTAGAAGGAGATAAACCACTTTC
CCAAGATAAATTGTGGCGAGTGTTTGCGAACTTCCTTCGTCCAGGCGACA
TCCTACTGGGAGAAACAGGCACGGCAGGATATGGTGTCCGCGAGATGGCG
TTTCCCAAGCACACCCGCCTTTTCGCACCCGTGACCTGGCTATCTATCGG
GTATATGCTACCAGGAGCACAGGGAGCCGCACTTGCGCAAGAAGAATTGA
TGGCATCAGACAACTACCACGGCATTAAAGATGCGCGCACAGTCCTTCTC
ATCGGCGATGGCAGTTTTCAAATGACCGCGCAGGAATTATCAACAATCAT
TCGACTCAAGCTGAACGTCGTGGTCTTCCTCATCAATAACGACGGATACA
CGATCGAGCGCTGCATCCATGGCCGGAAACAGGGATACAACGATGTGTCG
CGATGGAGATATCTACAGGCCCCCAGCTTCTTTGGAGCGAGTGAAGACAC
GTTCACTGCCTCAGTTAGAACCTGGAAGGAGCTACAGGATGTTTTCTCGA
ATGATGTTGTCAGTAACGGGAAAGAGCTGCGGATGGTTGAGATAATGCTA
GACCGTGAGGACGCTCCTATTGGACCTTTGTCGATGCTTATAGATCAGCA
AAGACGTACCGGCGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0016831carboxy-lyase activity
GO:0030976thiamine pyrophosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16475CAN33_16475Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16475-T1.exon1CAN33_16475-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16475-T1.cdsCAN33_16475-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16475-T1CAN33_16475-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR012001
DBxrefInterPro:IPR012000
DBxrefInterPro:IPR012110
DBxrefInterPro:IPR011766
DBxrefPFAM:PF02776
DBxrefPFAM:PF00205
DBxrefPFAM:PF02775
ProductThiamine pyrophosphate enzyme N-terminal TPP binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:216975..218693 +
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