|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:221345..222683- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16480-T1 ID=CAN33_16480-T1|Name=CAN33_16480-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1339bp|location=Sequence derived from alignment at NKJJ01000011.1:221345..222683- (Aspergillus niger FDAARGOS_311)
ATGGGACTCCTCGAGCTCCACAACGGGGCAAACCAAGCACTCGATATTGA
AGGTGAAGTTATTCGATCGTCAGCAGGTGTCTACGACAGGACAACTATAA
ATACAGCCTGTTTGGCCGCTGATCATCTTGATAAAGAAACTTCATGCTTA
TGAGTCTTTATCTACCTTGATCCTCAACACTGCTAAAATGATTCGGCTTT
TGCTACACACCGTTATTTTCCTATTTGTCGGCCTCAGTCGAGCAGCAATC
GTCCCCCTTCCTCCAAGCACCGGACCATGCGACGTCACGCTCCAGGCGAG
TGAACTGGTCGATCAAGCTCGTACCAATCCATTCGATTCAAAAGGGGGTA
AACGCGCTCTAATGGTCACGACCTTTACACCCGTCAATTGCGGAAGTGTG
CTCTCTGAATTTTACATACCGAATGCAACAGCAGCATACGAGGATGAGAG
TTTCCAGTCTCTTGGACTAGCCGCAGGGACTTTCGAGTCCTTTCGTATCC
AGACACAGCAGCAGCCATCACCTTCAATTGTTAACAAAAGCTATCCAATT
GTGCTCTTCTCACCAGCTCTGGGAACATCAAGATTGGTGTACACCTCGCT
GCTTCAAGACATTGCCAGTTACGGATTTGCTGTCATTTCCGTCGATCATC
CATACGATGCCAACATTGTGGAATTTCCCGATGGCCGTACGGTTATCGGC
GTTCTCGAAAACACCACTACAGATGCGCAGTTCACTTGGGCTATGAACGT
TCGCGTCCAAGACATGATATTTGTTTACAATCAGACTCGCAATGAGACAG
CAGTCAGAGACATATTCCCCTTGTCACTGAAAAATCCACATCTGCTATCT
CTCGACCGAGTCGCAATTACTGGCCATTCCCTTGGCGGAGCAACAGCAGC
GCAGACAATGTTGGTTGACAACCGATTTGTCGGCGGTATCAATTTAGATG
GTACATTCTGGGGATCTGTCCTCACTAAAGGACTGTCCAGCCCTTTTCTG
CTTTTCAGTAATGCCAACCACACAGCGGCAACAGATCCTAGCTGGGGAAC
ATTCTGGTCGAATTTACGAGGATGGAGATTGGAGCTACGACTCGCACAGT
CTAAGCACTATACCTTTTCCGACTTTCCGGTGCTTCTCGAATCCCTGAGT
ATCTCTGACGAACTGAAAGAAATTGTCCAGGCCAGTTATATTGGGACGAT
TGGTGCTTTGCGCGCTAAGAACGTGATTGTCTCGTACATCGTTGCTGCGT
TGCAGTACTTTGCTTATGGGCGCACGTCAGATCTACTGAGTGGCCCTTCG
GCAGCATATCCTGATGTTACTTTTGTACATTCTGCCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:221345..222683- >CAN33_16480-T1 ID=CAN33_16480-T1|Name=CAN33_16480-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2562bp|location=Sequence derived from alignment at NKJJ01000011.1:221345..222683- (Aspergillus niger FDAARGOS_311)
AAACTTCATGCTTATGAGTCTTTATCTACCTTGATCCTCAACACTGCTAA
AATGATTCGGCTTTTGCTACACACCGTTATTTTCCTATTTGTCGGCCTCA
GTCGAGCAGCAATCGTCCCCCTTCCTCCAAGCACCGGACCATGCGACGTC
ACGCTCCAGGCGAGTGAACTGGTCGATCAAGCTCGTACCAATCCATTCGA
TTCAAAAGGGGGTAAACGCGCTCTAATGGTCACGACCTTTACACCCGTCA
ATTGCGGAAGTGTGCTCTCTGAATTTTACATACCGAATGCAACAGCAGCA
TACGAGGATGAGAGTTTCCAGTCTCTTGGACTAGCCGCAGGGACTTTCGA
GTCCTTTCGTATCCAGACACAGCAGCAGCCATCACCTTCAATTGTTAACA
AAAGCTATCCAATTGTGCTCTTCTCACCAGCTCTGGGAACATCAAGATTG
GTGTACACCTCGCTGCTTCAAGACATTGCCAGTTACGGATTTGCTGTCAT
TTCCGTCGATCATCCATACGATGCCAACATTGTGGAATTTCCCGATGGCC
GTACGGTTATCGGCGTTCTCGAAAACACCACTACAGATGCGCAGTTCACT
TGGGCTATGAACGTTCGCGTCCAAGACATGATATTTGTTTACAATCAGAC
TCGCAATGAGACAGCAGTCAGAGACATATTCCCCTTGTCACTGAAAAATC
CACATCTGCTATCTCTCGACCGAGTCGCAATTACTGGCCATTCCCTTGGC
GGAGCAACAGCAGCGCAGACAATGTTGGTTGACAACCGATTTGTCGGCGG
TATCAATTTAGATGGTACATTCTGGGGATCTGTCCTCACTAAAGGACTGT
CCAGCCCTTTTCTGCTTTTCAGTAATGCCAACCACACAGCGGCAACAGAT
CCTAGCTGGGGAACATTCTGGTCGAATTTACGAGGATGGAGATTGGAGCT
ACGACTCGCACAGTCTAAGCACTATACCTTTTCCGACTTTCCGGTGCTTC
TCGAATCCCTGAGTATCTCTGACGAACTGAAAGAAATTGTCCAGGCCAGT
TATATTGGGACGATTGGTGCTTTGCGCGCTAAGAACGTGATTGTCTCGTA
CATCGTTGCTGCGTTGCAGTACTTTGCTTATGGGCGCACGTCAGATCTAC
TGAGTGGCCCTTCGGCAGCATATCCTGATGTTACTTTTGTACATTCTGCC
TAGATGGGACTCCTCGAGCTCCACAACGGGGCAAACCAAGCACTCGATAT
TGAAGGTGAAGTTATTCGATCGTCAGCAGGTAAACTTCATGCTTATGAGT
CTTTATCTACCTTGATCCTCAACACTGCTAAAATGATTCGGCTTTTGCTA
CACACCGTTATTTTCCTATTTGTCGGCCTCAGTCGAGCAGCAATCGTCCC
CCTTCCTCCAAGCACCGGACCATGCGACGTCACGCTCCAGGCGAGTGAAC
TGGTCGATCAAGCTCGTACCAATCCATTCGATTCAAAAGGGGGTAAACGC
GCTCTAATGGTCACGACCTTTACACCCGTCAATTGCGGAAGTGTGCTCTC
TGAATTTTACATACCGAATGCAACAGCAGCATACGAGGATGAGAGTTTCC
AGTCTCTTGGACTAGCCGCAGGGACTTTCGAGTCCTTTCGTATCCAGACA
CAGCAGCAGCCATCACCTTCAATTGTTAACAAAAGCTATCCAATTGTGCT
CTTCTCACCAGCTCTGGGAACATCAAGATTGGTGTACACCTCGCTGCTTC
AAGACATTGCCAGTTACGGATTTGCTGTCATTTCCGTCGATCATCCATAC
GATGCCAACATTGTGGAATTTCCCGATGGCCGTACGGTTATCGGCGTTCT
CGAAAACACCACTACAGATGCGCAGTTCACTTGGGCTATGAACGTTCGCG
TCCAAGACATGATATTTGTTTACAATCAGACTCGCAATGAGACAGCAGTC
AGAGACATATTCCCCTTGTCACTGAAAAATCCACATCTGCTATCTCTCGA
CCGAGTCGCAATTACTGGCCATTCCCTTGGCGGAGCAACAGCAGCGCAGA
CAATGTTGGTTGACAACCGATTTGTCGGCGGTATCAATTTAGATGGTACA
TTCTGGGGATCTGTCCTCACTAAAGGACTGTCCAGCCCTTTTCTGCTTTT
CAGTAATGCCAACCACACAGCGGCAACAGATCCTAGCTGGGGAACATTCT
GGTCGAATTTACGAGGATGGAGATTGGAGCTACGACTCGCACAGTCTAAG
CACTATACCTTTTCCGACTTTCCGGTGCTTCTCGAATCCCTGAGTATCTC
TGACGAACTGAAAGAAATTGTCCAGGCCAGTTATATTGGGACGATTGGTG
CTTTGCGCGCTAAGAACGTGATTGTCTCGTACATCGTTGCTGCGTTGCAG
TACTTTGCTTATGGGCGCACGTCAGATCTACTGAGTGGCCCTTCGGCAGC
ATATCCTGATGTTACTTTTGTACATTCTGCCTAGATGGGACTCCTCGAGC
TCCACAACGGGGCAAACCAAGCACTCGATATTGAAGGTGAAGTTATTCGA
TCGTCAGCAGGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR041127 |
| DBxref | PFAM:PF12740 |
| Product | Platelet-activating factor acetylhydrolase isoform II family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:221345..222683 - |
|
