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CAN33_17460-T1, CAN33_17460-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17460-T1
Unique NameCAN33_17460-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:808171..808944-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17460-T1 ID=CAN33_17460-T1|Name=CAN33_17460-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=774bp|location=Sequence derived from alignment at NKJJ01000011.1:808171..808944- (Aspergillus niger FDAARGOS_311)
ATGGAGTTATCTCCGCGCGCTGCTCTGGAGCCGAATCTTGGCCGCCGGCG
TCTCCAACGTTCATCATCGCAACAACAGCAGCATGAGCCACCGGATCATA
GAGCTCGAGTCCGCATACAAGATGCATCGCGTGAAATGGCATCTGGCGAG
CGAACGTAAGTAGTTATCGCTATGTATAGTGACTCGAATTCTAGATTCGC
CTGCCCAAATGCATAACCAGTACTAACATGGATGGATAATAGACCTTCAC
CATCGGTGAAACGAGGTAAAAAGGCCTGCACTGAGTGTAGGCAGCAGAAG
GTATGGAACATGAAAGCATGAGCCTCTTTCTGATGATAACGGAAATGGGA
TTTGGTATCTATCAATGGCTATTTCTAACCGAATAACAGGCAAAATGTGA
CGCCTACTTGAATCCCAGTCAGGCATGCTCGCGTTGTTCAAAGCTGAACA
TTCAATGTATTATATCGGATCCCTTTCGTCGGGAGCACAAACGCAAGTAT
GTTGGCTCTATATTTGGAATGATTGACAGGCGATAAATTGTGACCATTTC
ACAACAGGCGACTGTCCGAGCTCGAGCAAGAGACCGACGAGCTGCGACGA
AGATTGCGATATGCACAGCCCGATCCATCTCGACCCTCACCTATCACGAT
GCTAACGGCTGCGGCTGAGATGGGAGTTAATTCAGCAGCTGTTGAGGGCG
ACTTGGCTTTCCATACTCAGTCACATACACCCCGGTTGAGGATTCGCAAC
ACGTTTTACCTTCTCCTGGACTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:808171..808944-

>CAN33_17460-T1 ID=CAN33_17460-T1|Name=CAN33_17460-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2148bp|location=Sequence derived from alignment at NKJJ01000011.1:808171..808944- (Aspergillus niger FDAARGOS_311)
GCGACTGTCCGAGCTCGAGCAAGAGACCGACGAGCTGCGACGAAGATTGC
GATATGCACAGCCCGATCCATCTCGACCCTCACCTATCACGATGCTAACG
GCTGCGGCTGAGATGGGAGTTAATTCAGCAGCTGTTGAGGGCGACTTGGC
TTTCCATACTCAGTCACATACACCCCGGTTGAGGATTCGCAACACGTTTT
ACCTTCTCCTGGACTAGGCAAAATGTGACGCCTACTTGAATCCCAGTCAG
GCATGCTCGCGTTGTTCAAAGCTGAACATTCAATGTATTATATCGGATCC
CTTTCGTCGGGAGCACAAACGCAAACCTTCACCATCGGTGAAACGAGGTA
AAAAGGCCTGCACTGAGTGTAGGCAGCAGAAGATGGAGTTATCTCCGCGC
GCTGCTCTGGAGCCGAATCTTGGCCGCCGGCGTCTCCAACGTTCATCATC
GCAACAACAGCAGCATGAGCCACCGGATCATAGAGCTCGAGTCCGCATAC
AAGATGCATCGCGTGAAATGGCATCTGGCGAGCGAACGCGACTGTCCGAG
CTCGAGCAAGAGACCGACGAGCTGCGACGAAGATTGCGATATGCACAGCC
CGATCCATCTCGACCCTCACCTATCACGATGCTAACGGCTGCGGCTGAGA
TGGGAGTTAATTCAGCAGCTGTTGAGGGCGACTTGGCTTTCCATACTCAG
TCACATACACCCCGGTTGAGGATTCGCAACACGTTTTACCTTCTCCTGGA
CTAGGCAAAATGTGACGCCTACTTGAATCCCAGTCAGGCATGCTCGCGTT
GTTCAAAGCTGAACATTCAATGTATTATATCGGATCCCTTTCGTCGGGAG
CACAAACGCAAACCTTCACCATCGGTGAAACGAGGTAAAAAGGCCTGCAC
TGAGTGTAGGCAGCAGAAGATGGAGTTATCTCCGCGCGCTGCTCTGGAGC
CGAATCTTGGCCGCCGGCGTCTCCAACGTTCATCATCGCAACAACAGCAG
CATGAGCCACCGGATCATAGAGCTCGAGTCCGCATACAAGATGCATCGCG
TGAAATGGCATCTGGCGAGCGAACGCGACTGTCCGAGCTCGAGCAAGAGA
CCGACGAGCTGCGACGAAGATTGCGATATGCACAGCCCGATCCATCTCGA
CCCTCACCTATCACGATGCTAACGGCTGCGGCTGAGATGGGAGTTAATTC
AGCAGCTGTTGAGGGCGACTTGGCTTTCCATACTCAGTCACATACACCCC
GGTTGAGGATTCGCAACACGTTTTACCTTCTCCTGGACTAGGCAAAATGT
GACGCCTACTTGAATCCCAGTCAGGCATGCTCGCGTTGTTCAAAGCTGAA
CATTCAATGTATTATATCGGATCCCTTTCGTCGGGAGCACAAACGCAAAC
CTTCACCATCGGTGAAACGAGGTAAAAAGGCCTGCACTGAGTGTAGGCAG
CAGAAGATGGAGTTATCTCCGCGCGCTGCTCTGGAGCCGAATCTTGGCCG
CCGGCGTCTCCAACGTTCATCATCGCAACAACAGCAGCATGAGCCACCGG
ATCATAGAGCTCGAGTCCGCATACAAGATGCATCGCGTGAAATGGCATCT
GGCGAGCGAACGCGACTGTCCGAGCTCGAGCAAGAGACCGACGAGCTGCG
ACGAAGATTGCGATATGCACAGCCCGATCCATCTCGACCCTCACCTATCA
CGATGCTAACGGCTGCGGCTGAGATGGGAGTTAATTCAGCAGCTGTTGAG
GGCGACTTGGCTTTCCATACTCAGTCACATACACCCCGGTTGAGGATTCG
CAACACGTTTTACCTTCTCCTGGACTAGGCAAAATGTGACGCCTACTTGA
ATCCCAGTCAGGCATGCTCGCGTTGTTCAAAGCTGAACATTCAATGTATT
ATATCGGATCCCTTTCGTCGGGAGCACAAACGCAAACCTTCACCATCGGT
GAAACGAGGTAAAAAGGCCTGCACTGAGTGTAGGCAGCAGAAGATGGAGT
TATCTCCGCGCGCTGCTCTGGAGCCGAATCTTGGCCGCCGGCGTCTCCAA
CGTTCATCATCGCAACAACAGCAGCATGAGCCACCGGATCATAGAGCTCG
AGTCCGCATACAAGATGCATCGCGTGAAATGGCATCTGGCGAGCGAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17460CAN33_17460Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17460-T1CAN33_17460-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17460-T1.cdsCAN33_17460-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17460-T1.exon4CAN33_17460-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_17460-T1.exon3CAN33_17460-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_17460-T1.exon2CAN33_17460-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17460-T1.exon1CAN33_17460-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductFungal Zn(2)-Cys(6) binuclear cluster domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:808171..808944 -
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