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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1175992..1177903+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18070-T1 ID=CAN33_18070-T1|Name=CAN33_18070-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1912bp|location=Sequence derived from alignment at NKJJ01000011.1:1175992..1177903+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATA
CACCGGCGAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGC
GGGTCGTAGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGGTT
GGTAGCACCGCATCCATACATAATCCACAGAAATCTTAGCCCCCCTTTAC
CGTTTCAACTCAATGCCAATAATGCTAACGATGACTACGACGAATACAGA
GAACCGGGCCCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCCGCGCC
CCCGAAGACTTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCA
GTACCCGCTCGATATGGGCCGGAAGGGCACATCATCGACATCGAACGCCC
TAGCCGTGCAAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTATCGCG
CGCCGCGGACACAGCGACAACCGGATCGTGCATGCCTCCTTTAAGGATCT
GATTCCGCTGCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGACCGGC
CGTCGGAGGAAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACGCGCTC
GCCAGCTTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAA
GGGCGGGCGGCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGCTAATC
AGATGGGTGATACGTCGAAGAAGAATGATCGTATTATGAAGATCGTGGAG
AGACAGCAGGATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAGATCCC
TCGCGGTCCGCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGA
AGCTCACGGCTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCG
AATTGGAAGAATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGGTTGGC
GGCTGATGGACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTTCGCGC
AGTTCGCGGAGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGGAGGTC
AGGCTGCGTGCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCA
GAAGGAGGAGCATCTGCGCGCGTTGGCTCAGAAGGCCCGCGAGGAGCGTG
CAGCTGCTGGTAGCAGTCGGCGCGATTCTCGTGCCGGATCTCGCTCGCCG
TCGCGTAGCGTCAGCCGCAGCCCGTCGCCGTACTCGGCTAGTGAGGATGA
GGATGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAGG
CGGAGAGACAACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCATCCAG
ATGATGGCACGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCGCTGGG
ATTGGCCAAGCCGACGCAGGCATCCGAATCAATGTATGACTCGCGTCTGT
TCAATCAGACGAGCGGGATGGACTCGGGCTTCAACGAGGATAACCCGTAC
GACAAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTACCGTCC
ACGGGCGCAGGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGAGATGA
GCAAGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGAA
GGGTTCCGCGGCGCTGACATAGCTGAGGTGAGTCTATGCGTCCTCTTACT
CCACCGTACTCAAGAAATATACGCTAACTGATCCCCACAATTAGGCTCGT
GATGGCCCCGTGCAATTCGAAAAAGATACCACTGACCCCTTCGGCATCGA
CAGCATGATCGCCGACGTCACTGGCTCCGGTGCAGGCCAAAAGCGCTATG
GTATCCAGGAAGTCGACCGTTCGGAACGGGGCTCCAAACGGGCGCGTGTC
GATGATGATTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1175992..1177903+ >CAN33_18070-T1 ID=CAN33_18070-T1|Name=CAN33_18070-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6492bp|location=Sequence derived from alignment at NKJJ01000011.1:1175992..1177903+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATA
CACCGGCGAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGC
GGGTCGTAGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGAGA
ACCGGGCCCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCCGCGCCCC
CGAAGACTTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCAGT
ACCCGCTCGATATGGGCCGGAAGGGCACATCATCGACATCGAACGCCCTA
GCCGTGCAAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTATCGCGCG
CCGCGGACACAGCGACAACCGGATCGTGCATGCCTCCTTTAAGGATCTGA
TTCCGCTGCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGACCGGCCG
TCGGAGGAAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACGCGCTCGC
CAGCTTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAAGG
GCGGGCGGCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGCTAATCAG
ATGGGTGATACGTCGAAGAAGAATGATCGTATTATGAAGATCGTGGAGAG
ACAGCAGGATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAGATCCCTC
GCGGTCCGCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGAAG
CTCACGGCTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCGAA
TTGGAAGAATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGGTTGGCGG
CTGATGGACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTTCGCGCAG
TTCGCGGAGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGGAGGTCAG
GCTGCGTGCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCAGA
AGGAGGAGCATCTGCGCGCTGAGGATGAGGATGCTGCTCGGGAGCGGGAG
CGCGCGCGTCGTGAGCGTCGTCAGGAGGCGGAGAGACAACTCCGCCAGTC
GCGGATGGGTACGGAGAGACGCATCCAGATGATGGCACGCGAGCAGAACC
GGGATATTTCCGAGAAGGTGGCGCTGGGATTGGCCAAGCCGACGCAGGCA
TCCGAATCAATGTATGACTCGCGTCTGTTCAATCAGACGAGCGGGATGGA
CTCGGGCTTCAACGAGGATAACCCGTACGACAAACCGCTGTTTGCCGCGC
AGGAAGCCATTAACAGCATCTACCGTCCACGGGCGCAGGCGGATGACGAT
GACGGCGAAGGCGCCGAGGGCGAGATGAGCAAGATCCAGAAACAGAACCG
GTTCGAGGTGCTCGGTAGAGCGAAGGAAGGGTTCCGCGGCGCTGACATAG
CTGAGGCTCGTGATGGCCCCGTGCAATTCGAAAAAGATACCACTGACCCC
TTCGGCATCGACAGCATGATCGCCGACGTCACTGGCTCCGGTGCAGGCCA
AAAGCGCTATGGTATCCAGGAAGTCGACCGTTCGGAACGGGGCTCCAAAC
GGGCGCGTGTCGATGATGATTAAATGGCATCCATAGCGGAGGGCCTATTC
AAGTCTCTTCCCAAGCCGAAATACACCGGCGAGGAGGAAGAGCTACCACA
ACATGCACAACCCCGAGGTCCGCGGGTCGTAGGCCCGGGACAACTCGACG
AAACACAGATTGTTCTCCGGAGAACCGGGCCCCCTCCCTACCAGAACCGA
GCCGGATGGCGGCCCCGCGCCCCCGAAGACTTCGGCGATGGCGGCGCGTT
CCCCGAGATTCTAGTCGCGCAGTACCCGCTCGATATGGGCCGGAAGGGCA
CATCATCGACATCGAACGCCCTAGCCGTGCAAGTCGACGCCGAGGGAAAA
GTCAAATACGATGCTATCGCGCGCCGCGGACACAGCGACAACCGGATCGT
GCATGCCTCCTTTAAGGATCTGATTCCGCTGCGCCAGCGCGTCGATATGG
GCGAGGTGTCATTGGACCGGCCGTCGGAGGAAGAAGTCCAGGCGCAGATG
GAGAAGACAAAGAACGCGCTCGCCAGCTTAGTGGAGGGTGCGGCGGCGGC
GCAGAAGCCTAAGAATGTGAAGGGCGGGCGGCGAGCGGAACCTACGTTTG
TGAGGTATACGCCGGCTAATCAGATGGGTGATACGTCGAAGAAGAATGAT
CGTATTATGAAGATCGTGGAGAGACAGCAGGATCCCATGGAACCGCCTAA
GTTCAAGCACAAGAAGATCCCTCGCGGTCCGCCGTCGCCGCCTCCGCCGG
TTATGCATTCGCCGCCGAGGAAGCTCACGGCTGAGGATCAGGAAGCGTGG
AGGATCCCGCCGCCTGTGTCGAATTGGAAGAATCCTAAGGGTTACACGGT
TCCGTTGGATAAGCGGTTGGCGGCTGATGGACGCGGGCTGCAGGATGTGT
CGATCAACGATAAGTTCGCGCAGTTCGCGGAGGCGCTGTTTACGGCGGAT
CGGCACGCCAGAGAGGAGGTCAGGCTGCGTGCTCAGATGCAGCAGAAGCT
GGCGGAGAAGGAGAAGGCCCAGAAGGAGGAGCATCTGCGCGCTGAGGATG
AGGATGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAG
GCGGAGAGACAACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCATCCA
GATGATGGCACGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCGCTGG
GATTGGCCAAGCCGACGCAGGCATCCGAATCAATGTATGACTCGCGTCTG
TTCAATCAGACGAGCGGGATGGACTCGGGCTTCAACGAGGATAACCCGTA
CGACAAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTACCGTC
CACGGGCGCAGGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGAGATG
AGCAAGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGA
AGGGTTCCGCGGCGCTGACATAGCTGAGGCTCGTGATGGCCCCGTGCAAT
TCGAAAAAGATACCACTGACCCCTTCGGCATCGACAGCATGATCGCCGAC
GTCACTGGCTCCGGTGCAGGCCAAAAGCGCTATGGTATCCAGGAAGTCGA
CCGTTCGGAACGGGGCTCCAAACGGGCGCGTGTCGATGATGATTAAATGG
CATCCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATACACC
GGCGAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGCGGGT
CGTAGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGAGAACCG
GGCCCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCCGCGCCCCCGAA
GACTTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCAGTACCC
GCTCGATATGGGCCGGAAGGGCACATCATCGACATCGAACGCCCTAGCCG
TGCAAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTATCGCGCGCCGC
GGACACAGCGACAACCGGATCGTGCATGCCTCCTTTAAGGATCTGATTCC
GCTGCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGACCGGCCGTCGG
AGGAAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACGCGCTCGCCAGC
TTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAAGGGCGG
GCGGCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGCTAATCAGATGG
GTGATACGTCGAAGAAGAATGATCGTATTATGAAGATCGTGGAGAGACAG
CAGGATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAGATCCCTCGCGG
TCCGCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGAAGCTCA
CGGCTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCGAATTGG
AAGAATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGGTTGGCGGCTGA
TGGACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTTCGCGCAGTTCG
CGGAGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGGAGGTCAGGCTG
CGTGCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCAGAAGGA
GGAGCATCTGCGCGCTGAGGATGAGGATGCTGCTCGGGAGCGGGAGCGCG
CGCGTCGTGAGCGTCGTCAGGAGGCGGAGAGACAACTCCGCCAGTCGCGG
ATGGGTACGGAGAGACGCATCCAGATGATGGCACGCGAGCAGAACCGGGA
TATTTCCGAGAAGGTGGCGCTGGGATTGGCCAAGCCGACGCAGGCATCCG
AATCAATGTATGACTCGCGTCTGTTCAATCAGACGAGCGGGATGGACTCG
GGCTTCAACGAGGATAACCCGTACGACAAACCGCTGTTTGCCGCGCAGGA
AGCCATTAACAGCATCTACCGTCCACGGGCGCAGGCGGATGACGATGACG
GCGAAGGCGCCGAGGGCGAGATGAGCAAGATCCAGAAACAGAACCGGTTC
GAGGTGCTCGGTAGAGCGAAGGAAGGGTTCCGCGGCGCTGACATAGCTGA
GGCTCGTGATGGCCCCGTGCAATTCGAAAAAGATACCACTGACCCCTTCG
GCATCGACAGCATGATCGCCGACGTCACTGGCTCCGGTGCAGGCCAAAAG
CGCTATGGTATCCAGGAAGTCGACCGTTCGGAACGGGGCTCCAAACGGGC
GCGTGTCGATGATGATTAAATGGCATCCATAGCGGAGGGCCTATTCAAGT
CTCTTCCCAAGCCGAAATACACCGGCGAGGAGGAAGAGCTACCACAACAT
GCACAACCCCGAGGTCCGCGGGTCGTAGGCCCGGGACAACTCGACGAAAC
ACAGATTGTTCTCCGGAGAACCGGGCCCCCTCCCTACCAGAACCGAGCCG
GATGGCGGCCCCGCGCCCCCGAAGACTTCGGCGATGGCGGCGCGTTCCCC
GAGATTCTAGTCGCGCAGTACCCGCTCGATATGGGCCGGAAGGGCACATC
ATCGACATCGAACGCCCTAGCCGTGCAAGTCGACGCCGAGGGAAAAGTCA
AATACGATGCTATCGCGCGCCGCGGACACAGCGACAACCGGATCGTGCAT
GCCTCCTTTAAGGATCTGATTCCGCTGCGCCAGCGCGTCGATATGGGCGA
GGTGTCATTGGACCGGCCGTCGGAGGAAGAAGTCCAGGCGCAGATGGAGA
AGACAAAGAACGCGCTCGCCAGCTTAGTGGAGGGTGCGGCGGCGGCGCAG
AAGCCTAAGAATGTGAAGGGCGGGCGGCGAGCGGAACCTACGTTTGTGAG
GTATACGCCGGCTAATCAGATGGGTGATACGTCGAAGAAGAATGATCGTA
TTATGAAGATCGTGGAGAGACAGCAGGATCCCATGGAACCGCCTAAGTTC
AAGCACAAGAAGATCCCTCGCGGTCCGCCGTCGCCGCCTCCGCCGGTTAT
GCATTCGCCGCCGAGGAAGCTCACGGCTGAGGATCAGGAAGCGTGGAGGA
TCCCGCCGCCTGTGTCGAATTGGAAGAATCCTAAGGGTTACACGGTTCCG
TTGGATAAGCGGTTGGCGGCTGATGGACGCGGGCTGCAGGATGTGTCGAT
CAACGATAAGTTCGCGCAGTTCGCGGAGGCGCTGTTTACGGCGGATCGGC
ACGCCAGAGAGGAGGTCAGGCTGCGTGCTCAGATGCAGCAGAAGCTGGCG
GAGAAGGAGAAGGCCCAGAAGGAGGAGCATCTGCGCGCTGAGGATGAGGA
TGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAGGCGG
AGAGACAACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCATCCAGATG
ATGGCACGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCGCTGGGATT
GGCCAAGCCGACGCAGGCATCCGAATCAATGTATGACTCGCGTCTGTTCA
ATCAGACGAGCGGGATGGACTCGGGCTTCAACGAGGATAACCCGTACGAC
AAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTACCGTCCACG
GGCGCAGGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGAGATGAGCA
AGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGAAGGG
TTCCGCGGCGCTGACATAGCTGAGGCTCGTGATGGCCCCGTGCAATTCGA
AAAAGATACCACTGACCCCTTCGGCATCGACAGCATGATCGCCGACGTCA
CTGGCTCCGGTGCAGGCCAAAAGCGCTATGGTATCCAGGAAGTCGACCGT
TCGGAACGGGGCTCCAAACGGGCGCGTGTCGATGATGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264DT4 |
| DBxref | InterPro:IPR004015 |
| DBxref | PFAM:PF02731 |
| Product | mRNA splicing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1175992..1177903 + |
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