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CAN33_18185-T1, CAN33_18185-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18185-T1
Unique NameCAN33_18185-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1256660..1258071-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18185-T1 ID=CAN33_18185-T1|Name=CAN33_18185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1412bp|location=Sequence derived from alignment at NKJJ01000011.1:1256660..1258071- (Aspergillus niger FDAARGOS_311)
ATGGCATCCCATCAACTCGCCATTGCCAAGGCCTCCTTCTCCGCAGGACT
CCTGCGGCCAGACCCGACGTCCGTCGCGCGCGACGAAATCACAGCCTTCC
ACACCAGCCTAGACCGGGCGCTATCGCATTGCACCCCGGCAAACATCCAG
GTTTGAACCGATGCGTCCTAACCCACTGGCCAATACCCCAGAAGTACTAA
AATAATGTTCTCTTTTGCGCACCCCCTAGACCTGCAAACAATGGCTCCTG
GAATACGTCGTCTCGTCAGGTAACCGCGTAGGCGGATGGGCCAAATACCT
AGCTGCGTTGTCTGGATCTTTCGAATCGTCATCATCCACACCATCGCCGG
CCGAGACTGGTGGGAAAAGGTCGACATCAACATCTGGCAAGCGAAAACGC
CTTCATATTTTATATCTGCTGAATGATGTGCTGCATCATACGAAATACCA
TCTGGATACGACCGCCGCGTTCAGCACATTGAGCGGATCGCTGCAGCCGC
GTGTGGTCGAGCTGTTGGGCTACGCAGCGTCGTATGATCGCGAGAAGAAC
CCGAAGCATCATCGTCGATTGGATGAGTTGCTCGATATCTGGGAGGAGAA
CCGCTATTACGGGAGTGATTATGTGAATAAGCTACGAGAGGTGGTCAAGA
ATGCTTCGGTGTCCGGTCCGGTCAAGACGTCGCTAAGTGTCGAGGAAAGT
AATGTGGATTTCTCAGGAGCTGGTGCGAAGCCAATGCCCTCGGGCAAGGG
TGTCCCGTTCGTCATGCCGGCTACGCATGGTGATCCATCTATGCCCTACT
ACGACCTACCTGCCGGAAACCTCGTTCCGCATATCATCCCAGATTCGACG
GTACCGCTGCGGCCGGAGTCGATCAAGCCGCTGCAGTTCTTGGCTGGACC
GGCGGATGAGAATCTTGTCGTGGCGCTGAAGAAGTTCCTCAAGGACGTGG
ATCGGATATATGGGACTGGAGAGCCGGAGCACGAAGAGGACGAGGTTGTG
GATATTGATGATCTAGGCCAGGTGGTCGTCCGCGATGCCGATGGGGAGGT
AATCGAGGGAGAGACATACTACGGATGGTCACGGTCATTCTGCCAACAGA
TGAAGAAGCGACAGGCGAAGGGAGACATGAGTCGCAGCCGGAGCCGCAGT
CGCAGCCCCCTCAAGCGCCGACGATACAGCGACAGCGCCAGCGACTGGAG
TTCTCGTTCACGGTCACGATCTCGTTCACCACAGCGCAGATCACGCCGGC
GTGATTCCCGATCCCGAACACGGTCTCCATACCGACCTCGCAGTGCATCT
CGGTCCAAATCGCGGGAGCGATCCAAGTCCTATTCTCCGCGTCCGCCAGC
TCCACGATCCATCCCTCCTCCGCCTGAATACCATCATCAACCCCAATACC
CCCACCACATAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1256660..1258071-

>CAN33_18185-T1 ID=CAN33_18185-T1|Name=CAN33_18185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3879bp|location=Sequence derived from alignment at NKJJ01000011.1:1256660..1258071- (Aspergillus niger FDAARGOS_311)
ATCACGCCGGCGTGATTCCCGATCCCGAACACGGTCTCCATACCGACCTC
GCAGTGCATCTCGGTCCAAATCGCGGGAGCGATCCAAGTCCTATTCTCCG
CGTCCGCCAGCTCCACGATCCATCCCTCCTCCGCCTGAATACCATCATCA
ACCCCAATACCCCCACCACATAAACCTGCAAACAATGGCTCCTGGAATAC
GTCGTCTCGTCAGGTAACCGCGTAGGCGGATGGGCCAAATACCTAGCTGC
GTTGTCTGGATCTTTCGAATCGTCATCATCCACACCATCGCCGGCCGAGA
CTGGTGGGAAAAGGTCGACATCAACATCTGGCAAGCGAAAACGCCTTCAT
ATTTTATATCTGCTGAATGATGTGCTGCATCATACGAAATACCATCTGGA
TACGACCGCCGCGTTCAGCACATTGAGCGGATCGCTGCAGCCGCGTGTGG
TCGAGCTGTTGGGCTACGCAGCGTCGTATGATCGCGAGAAGAACCCGAAG
CATCATCGTCGATTGGATGAGTTGCTCGATATCTGGGAGGAGAACCGCTA
TTACGGGAGTGATTATGTGAATAAGCTACGAGAGGTGGTCAAGAATGCTT
CGGTGTCCGGTCCGGTCAAGACGTCGCTAAGTGTCGAGGAAAGTAATGTG
GATTTCTCAGGAGCTGGTGCGAAGCCAATGCCCTCGGGCAAGGGTGTCCC
GTTCGTCATGCCGGCTACGCATGGTGATCCATCTATGCCCTACTACGACC
TACCTGCCGGAAACCTCGTTCCGCATATCATCCCAGATTCGACGGTACCG
CTGCGGCCGGAGTCGATCAAGCCGCTGCAGTTCTTGGCTGGACCGGCGGA
TGAGAATCTTGTCGTGGCGCTGAAGAAGTTCCTCAAGGACGTGGATCGGA
TATATGGGACTGGAGAGCCGGAGCACGAAGAGGACGAGGTTGTGGATATT
GATGATCTAGGCCAGGTGGTCGTCCGCGATGCCGATGGGGAGGTAATCGA
GGGAGAGACATACTACGGATGGTCACGGTCATTCTGCCAACAGATGAAGA
AGCGACAGGCGAAGGGAGACATGAGTCGCAGCCGGAGCCGCAGTCGCAGC
CCCCTCAAGCGCCGACGATACAGCGACAGCGCCAGCGACTGGAATGGCAT
CCCATCAACTCGCCATTGCCAAGGCCTCCTTCTCCGCAGGACTCCTGCGG
CCAGACCCGACGTCCGTCGCGCGCGACGAAATCACAGCCTTCCACACCAG
CCTAGACCGGGCGCTATCGCATTGCACCCCGGCAAACATCCAGATCACGC
CGGCGTGATTCCCGATCCCGAACACGGTCTCCATACCGACCTCGCAGTGC
ATCTCGGTCCAAATCGCGGGAGCGATCCAAGTCCTATTCTCCGCGTCCGC
CAGCTCCACGATCCATCCCTCCTCCGCCTGAATACCATCATCAACCCCAA
TACCCCCACCACATAAACCTGCAAACAATGGCTCCTGGAATACGTCGTCT
CGTCAGGTAACCGCGTAGGCGGATGGGCCAAATACCTAGCTGCGTTGTCT
GGATCTTTCGAATCGTCATCATCCACACCATCGCCGGCCGAGACTGGTGG
GAAAAGGTCGACATCAACATCTGGCAAGCGAAAACGCCTTCATATTTTAT
ATCTGCTGAATGATGTGCTGCATCATACGAAATACCATCTGGATACGACC
GCCGCGTTCAGCACATTGAGCGGATCGCTGCAGCCGCGTGTGGTCGAGCT
GTTGGGCTACGCAGCGTCGTATGATCGCGAGAAGAACCCGAAGCATCATC
GTCGATTGGATGAGTTGCTCGATATCTGGGAGGAGAACCGCTATTACGGG
AGTGATTATGTGAATAAGCTACGAGAGGTGGTCAAGAATGCTTCGGTGTC
CGGTCCGGTCAAGACGTCGCTAAGTGTCGAGGAAAGTAATGTGGATTTCT
CAGGAGCTGGTGCGAAGCCAATGCCCTCGGGCAAGGGTGTCCCGTTCGTC
ATGCCGGCTACGCATGGTGATCCATCTATGCCCTACTACGACCTACCTGC
CGGAAACCTCGTTCCGCATATCATCCCAGATTCGACGGTACCGCTGCGGC
CGGAGTCGATCAAGCCGCTGCAGTTCTTGGCTGGACCGGCGGATGAGAAT
CTTGTCGTGGCGCTGAAGAAGTTCCTCAAGGACGTGGATCGGATATATGG
GACTGGAGAGCCGGAGCACGAAGAGGACGAGGTTGTGGATATTGATGATC
TAGGCCAGGTGGTCGTCCGCGATGCCGATGGGGAGGTAATCGAGGGAGAG
ACATACTACGGATGGTCACGGTCATTCTGCCAACAGATGAAGAAGCGACA
GGCGAAGGGAGACATGAGTCGCAGCCGGAGCCGCAGTCGCAGCCCCCTCA
AGCGCCGACGATACAGCGACAGCGCCAGCGACTGGAATGGCATCCCATCA
ACTCGCCATTGCCAAGGCCTCCTTCTCCGCAGGACTCCTGCGGCCAGACC
CGACGTCCGTCGCGCGCGACGAAATCACAGCCTTCCACACCAGCCTAGAC
CGGGCGCTATCGCATTGCACCCCGGCAAACATCCAGATCACGCCGGCGTG
ATTCCCGATCCCGAACACGGTCTCCATACCGACCTCGCAGTGCATCTCGG
TCCAAATCGCGGGAGCGATCCAAGTCCTATTCTCCGCGTCCGCCAGCTCC
ACGATCCATCCCTCCTCCGCCTGAATACCATCATCAACCCCAATACCCCC
ACCACATAAACCTGCAAACAATGGCTCCTGGAATACGTCGTCTCGTCAGG
TAACCGCGTAGGCGGATGGGCCAAATACCTAGCTGCGTTGTCTGGATCTT
TCGAATCGTCATCATCCACACCATCGCCGGCCGAGACTGGTGGGAAAAGG
TCGACATCAACATCTGGCAAGCGAAAACGCCTTCATATTTTATATCTGCT
GAATGATGTGCTGCATCATACGAAATACCATCTGGATACGACCGCCGCGT
TCAGCACATTGAGCGGATCGCTGCAGCCGCGTGTGGTCGAGCTGTTGGGC
TACGCAGCGTCGTATGATCGCGAGAAGAACCCGAAGCATCATCGTCGATT
GGATGAGTTGCTCGATATCTGGGAGGAGAACCGCTATTACGGGAGTGATT
ATGTGAATAAGCTACGAGAGGTGGTCAAGAATGCTTCGGTGTCCGGTCCG
GTCAAGACGTCGCTAAGTGTCGAGGAAAGTAATGTGGATTTCTCAGGAGC
TGGTGCGAAGCCAATGCCCTCGGGCAAGGGTGTCCCGTTCGTCATGCCGG
CTACGCATGGTGATCCATCTATGCCCTACTACGACCTACCTGCCGGAAAC
CTCGTTCCGCATATCATCCCAGATTCGACGGTACCGCTGCGGCCGGAGTC
GATCAAGCCGCTGCAGTTCTTGGCTGGACCGGCGGATGAGAATCTTGTCG
TGGCGCTGAAGAAGTTCCTCAAGGACGTGGATCGGATATATGGGACTGGA
GAGCCGGAGCACGAAGAGGACGAGGTTGTGGATATTGATGATCTAGGCCA
GGTGGTCGTCCGCGATGCCGATGGGGAGGTAATCGAGGGAGAGACATACT
ACGGATGGTCACGGTCATTCTGCCAACAGATGAAGAAGCGACAGGCGAAG
GGAGACATGAGTCGCAGCCGGAGCCGCAGTCGCAGCCCCCTCAAGCGCCG
ACGATACAGCGACAGCGCCAGCGACTGGAATGGCATCCCATCAACTCGCC
ATTGCCAAGGCCTCCTTCTCCGCAGGACTCCTGCGGCCAGACCCGACGTC
CGTCGCGCGCGACGAAATCACAGCCTTCCACACCAGCCTAGACCGGGCGC
TATCGCATTGCACCCCGGCAAACATCCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18185CAN33_18185Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18185-T1CAN33_18185-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18185-T1.cdsCAN33_18185-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18185-T1.exon3CAN33_18185-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18185-T1.exon2CAN33_18185-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18185-T1.exon1CAN33_18185-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006903
DBxrefInterPro:IPR008942
DBxrefInterPro:IPR006569
DBxrefPFAM:PF04818
ProductRNA polymerase II-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1256660..1258071 -
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