You are here

Home

CAN33_18285-T1, CAN33_18285-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18285-T1
Unique NameCAN33_18285-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1322266..1323690-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18285-T1 ID=CAN33_18285-T1|Name=CAN33_18285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1425bp|location=Sequence derived from alignment at NKJJ01000011.1:1322266..1323690- (Aspergillus niger FDAARGOS_311)
ATGCCTCCTTCTGAGCACAGTCTCTTCCAATTTCTCGCCAAAGCCCTCCA
AACCCACCACCGCTTCCTCGCCGGCCGACTCTCGCGCGCCGAAAGCCCTA
TCTACGTCATCGGCAACCCCTCCGCCGACCTCGATTCCATCATCTCCGCC
ATTGTCTATGCCTCCTTTGCCCATCCCCGGCCTCACGTCCCTCTAATCAA
CCTAGCTACTGTCCCGACAGGCCCTGAACTGCGCCGTCTGCGTCCCGAAT
TCATCAAATCCCTCTGGCTCTCCACGCACCCCCCAGTCCCGGACGAAGAA
ACATGGTCCGACACGCCCGAGTCCGCCGGTCCCCTTCTCCAAGAACACAT
CCTCACCGTCTCCGACTTTGCAACTCACCTCCAAGACTACAACCACAATG
ATAATCAATTAACCGCCGACGCCGTCCTCGTCGACTGGAATGCCCTCCCC
ATCCGCTCCCCCAACCAACTCCGAGGCCAAGGCTCCCTCCCCGCCCTCCC
CAACCTCATCTTCACCGTCCTCGGCTGCATCGACCACCACATCGACGAAC
ACTTCCTGGCCCCAATCACCGACCCAGACCAGCCCTTCCTCCTTCAACCC
GCCGGATCATGCACCTCGCTCGTAGTCAACATGCTGGATAAAATGGACCG
CTGGCGGCGCACTTCCTCCACCACCTCCAGCCCTTCGGAGCTATCGTCAG
AACTCCAACTAGCCAAGCTAGCCATGAGCGCTATTCTCATCGATACGGCG
AACTTCACCGCCAAGGAGAAAGTCACGGACTCGGATACGCTTGCGTATAG
TTTTCTGAGATCGAAGATTAATGCGATTTCGAATCGAGATGGAGATGGGG
CTGGGAAGCCATGGGATCATAATAATTTCTACGAGGAAGTGGTGGCTGCG
AAGCAGGGGAGTTTGGATTTGTTGACTGTTCCGGAGGTGTTGGAGAGGGA
TTATAAGGAGTGGAGCGAGAAACCCTCATCATCTTCTTTTTCTCAGGAGG
TGAAAATTGGGATCTGTTCGATGGTGCGGTCATTGCCGTGGTTGGAGCGA
AAAGCGGGCGGGGCGGATAAGCTCCTCGACGCTGTGGTGGAATATGCGAC
GAGGGAGGAATTGGATGTGGTGATGGTCATGACGGCGTTTAGTGGTGCGG
AGGGGAATTTTTGTCGGGAGTTGTTGGTGTGTGCGCGTGAAGAGGGTGTG
CGTGGAGTGGAAGTATTTGAGGAGCAGGCGGGAGTGCAGTTGGGGTTGGA
GAAGTGGACGGTGTTGGATGGAGATGAGGAGAGTAAGAGTAGTGAGTTGG
GAGATGTAAAGTGGGAGAAAGATGATGACCAGCCGTGGAGGAAATGGATC
TGGGTGCAGGAGGATGTCACGAAGAGTCGAAAACAGGTGGCCCCCTTGAT
TAGGGAGGCTGTGAAGTCTTTGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:1322266..1323690-

>CAN33_18285-T1 ID=CAN33_18285-T1|Name=CAN33_18285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1425bp|location=Sequence derived from alignment at NKJJ01000011.1:1322266..1323690- (Aspergillus niger FDAARGOS_311)
ATGCCTCCTTCTGAGCACAGTCTCTTCCAATTTCTCGCCAAAGCCCTCCA
AACCCACCACCGCTTCCTCGCCGGCCGACTCTCGCGCGCCGAAAGCCCTA
TCTACGTCATCGGCAACCCCTCCGCCGACCTCGATTCCATCATCTCCGCC
ATTGTCTATGCCTCCTTTGCCCATCCCCGGCCTCACGTCCCTCTAATCAA
CCTAGCTACTGTCCCGACAGGCCCTGAACTGCGCCGTCTGCGTCCCGAAT
TCATCAAATCCCTCTGGCTCTCCACGCACCCCCCAGTCCCGGACGAAGAA
ACATGGTCCGACACGCCCGAGTCCGCCGGTCCCCTTCTCCAAGAACACAT
CCTCACCGTCTCCGACTTTGCAACTCACCTCCAAGACTACAACCACAATG
ATAATCAATTAACCGCCGACGCCGTCCTCGTCGACTGGAATGCCCTCCCC
ATCCGCTCCCCCAACCAACTCCGAGGCCAAGGCTCCCTCCCCGCCCTCCC
CAACCTCATCTTCACCGTCCTCGGCTGCATCGACCACCACATCGACGAAC
ACTTCCTGGCCCCAATCACCGACCCAGACCAGCCCTTCCTCCTTCAACCC
GCCGGATCATGCACCTCGCTCGTAGTCAACATGCTGGATAAAATGGACCG
CTGGCGGCGCACTTCCTCCACCACCTCCAGCCCTTCGGAGCTATCGTCAG
AACTCCAACTAGCCAAGCTAGCCATGAGCGCTATTCTCATCGATACGGCG
AACTTCACCGCCAAGGAGAAAGTCACGGACTCGGATACGCTTGCGTATAG
TTTTCTGAGATCGAAGATTAATGCGATTTCGAATCGAGATGGAGATGGGG
CTGGGAAGCCATGGGATCATAATAATTTCTACGAGGAAGTGGTGGCTGCG
AAGCAGGGGAGTTTGGATTTGTTGACTGTTCCGGAGGTGTTGGAGAGGGA
TTATAAGGAGTGGAGCGAGAAACCCTCATCATCTTCTTTTTCTCAGGAGG
TGAAAATTGGGATCTGTTCGATGGTGCGGTCATTGCCGTGGTTGGAGCGA
AAAGCGGGCGGGGCGGATAAGCTCCTCGACGCTGTGGTGGAATATGCGAC
GAGGGAGGAATTGGATGTGGTGATGGTCATGACGGCGTTTAGTGGTGCGG
AGGGGAATTTTTGTCGGGAGTTGTTGGTGTGTGCGCGTGAAGAGGGTGTG
CGTGGAGTGGAAGTATTTGAGGAGCAGGCGGGAGTGCAGTTGGGGTTGGA
GAAGTGGACGGTGTTGGATGGAGATGAGGAGAGTAAGAGTAGTGAGTTGG
GAGATGTAAAGTGGGAGAAAGATGATGACCAGCCGTGGAGGAAATGGATC
TGGGTGCAGGAGGATGTCACGAAGAGTCGAAAACAGGTGGCCCCCTTGAT
TAGGGAGGCTGTGAAGTCTTTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0016462pyrophosphatase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18285CAN33_18285Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18285-T1.cdsCAN33_18285-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18285-T1.exon1CAN33_18285-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18285-T1CAN33_18285-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000111.8
DBxrefInterPro:IPR038763
DBxrefInterPro:IPR001667
DBxrefInterPro:IPR038222
DBxrefInterPro:IPR004097
DBxrefPFAM:PF02833
DBxrefPFAM:PF01368
ProductDHHA2 domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1322266..1323690 -
Powered by Drupal