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CAN33_18450-T1, CAN33_18450-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18450-T1
Unique NameCAN33_18450-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1406911..1407536+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18450-T1 ID=CAN33_18450-T1|Name=CAN33_18450-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=626bp|location=Sequence derived from alignment at NKJJ01000011.1:1406911..1407536+ (Aspergillus niger FDAARGOS_311)
ATGGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTC
CGCCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCA
TCGATAAACGCACTCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGT
CGCTTAACAAAACTAATCCTTCAAGTGAGTCTATTTGCAGTCTACTCCAA
TGCTACTGACTTGTACTGACTGAAGTCCTCTAGAATGCATCTTATGTGTA
TGTTTCTCCGCACTCGGACTCCCCTCGATCAATCCGAACTAACGAATGCA
CAAAGACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGG
TTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCT
CCCGATGACAAGTACTCTCGGTAGGTTCTTTTCGCCGACGATCTCCAGGC
ACATTGGAGAGAATTTGTGGACTAATGATATTGGCTATTTAGGCACCGTG
TGACCCTCAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCCGGTATG
AAACCCCGAGTGCGAGTCCCCATATAGTGGATATGGCTGACGGCAGACTA
CAGACAAGGAGGCTGCTAAGCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1406911..1407536+

>CAN33_18450-T1 ID=CAN33_18450-T1|Name=CAN33_18450-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1935bp|location=Sequence derived from alignment at NKJJ01000011.1:1406911..1407536+ (Aspergillus niger FDAARGOS_311)
ATGGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTC
CGCCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCA
TCGATAAACGCACTCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGT
CGCTTAACAAAACTAATCCTTCAATCCTCTAGAATGCATCTTATGTACTC
TCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGGTTACCGAGG
ACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCTCCCGATGAC
AAGTACTCTCGGCACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTAT
GACCCAGCAAGCCGACAAGGAGGCTGCTAAGCTGTAAATGGGACCGCGCG
TGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTCCGCCAAAAATTTC
CTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCATCGATAAACGCAC
TCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGTCGCTTAACAAAAC
TAATCCTTCAATCCTCTAGAATGCATCTTATGTACTCTCTGGGCCCCGAT
GGCAAGCGGGTTTACACCCTCAAGAAGGTTACCGAGGACGGTCGCGTTAC
CAAGAGTGCTCACCCCGCCCGTTTCTCTCCCGATGACAAGTACTCTCGGC
ACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCC
GACAAGGAGGCTGCTAAGCTGTAAATGGGACCGCGCGTGACTAAGCTGGC
CCTTGGCCCGTGCCCCGTTCGGTCCGCCAAAAATTTCCTGCGTATCGCCG
AAGTTCAAGTGCAGCGGTTTGGCATCGATAAACGCACTCGTTCAACACCC
AGCACCTTCATTTCGTCTTCCAGTCGCTTAACAAAACTAATCCTTCAATC
CTCTAGAATGCATCTTATGTACTCTCTGGGCCCCGATGGCAAGCGGGTTT
ACACCCTCAAGAAGGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCAC
CCCGCCCGTTTCTCTCCCGATGACAAGTACTCTCGGCACCGTGTGACCCT
CAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCCGACAAGGAGGCTG
CTAAGCTGTAAATGGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGC
CCCGTTCGGTCCGCCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCA
GCGGTTTGGCATCGATAAACGCACTCGTTCAACACCCAGCACCTTCATTT
CGTCTTCCAGTCGCTTAACAAAACTAATCCTTCAATCCTCTAGAATGCAT
CTTATGTACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAA
GGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCT
CTCCCGATGACAAGTACTCTCGGCACCGTGTGACCCTCAAGAAGAGATAC
GGTCTGCTTATGACCCAGCAAGCCGACAAGGAGGCTGCTAAGCTGTAAAT
GGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTCCG
CCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCATC
GATAAACGCACTCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGTCG
CTTAACAAAACTAATCCTTCAATCCTCTAGAATGCATCTTATGTACTCTC
TGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGGTTACCGAGGAC
GGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCTCCCGATGACAA
GTACTCTCGGCACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATGA
CCCAGCAAGCCGACAAGGAGGCTGCTAAGCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0001522pseudouridine synthesis
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18450CAN33_18450Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18450-T1CAN33_18450-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18450-T1.exon1CAN33_18450-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18450-T1.exon2CAN33_18450-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18450-T1.exon3CAN33_18450-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18450-T1.exon4CAN33_18450-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_18450-T1.exon5CAN33_18450-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18450-T1.cdsCAN33_18450-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR007264
DBxrefInterPro:IPR036756
DBxrefPFAM:PF04135
ProductNucleolar RNA-binding protein Nop10p family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1406911..1407536 +
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