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CAN33_18515-T1, CAN33_18515-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18515-T1
Unique NameCAN33_18515-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1439172..1441290+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18515-T1 ID=CAN33_18515-T1|Name=CAN33_18515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2119bp|location=Sequence derived from alignment at NKJJ01000011.1:1439172..1441290+ (Aspergillus niger FDAARGOS_311)
ATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGACCT
GACTCGCTCTAACAATTTGGACGAGAAGGTGAGGATCAGCACTTTTCTCT
CTGTCTGATGTATGTACTGACTGTTAGCAGGCCTTTGATGACATGATCAA
AGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCC
AGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCT
CCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCT
GGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCC
GCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACC
ACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGC
CCTTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAAC
AGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAACC
GACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCG
TTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAG
AGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCAG
ACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTC
CTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAGA
CGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACA
CACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGGA
ACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATA
TGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCC
GCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCGA
CTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGC
TCTCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGAC
GAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCAT
GACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTA
GCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTC
GAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGT
CGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCG
GTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATG
GGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACAT
GGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTG
GTCTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGATG
AGTGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGACG
GTGATTGTGATGATGACGATGATGCACGCATTCTGAAATTCCTTCTTGAC
TTTTGATTTCGCGTTGTTACCATTCCATGATTATATTCTACACCTGTGCT
CCGTCTCTTTTTTACGTTTGATTCTTAAGAGACTGGGATATATGGCCTTG
CTTCAGTTCAGTCATCATTCACCTCATTCGTCGATTGTAACTAGCATATG
ATGGTGTTGGGCGTGACTTGATTTTACTTGTGCTTACCTCTTTGCTAATA
TCCGACTGGCCCTCTGGGGCATCAAATCTATGCTATCAAAGCTCATTTCC
CATTCTTTCCAGGTGATATAATAAGTATTAGACTGGGAAAATATATCTAC
AGTATCTAGGTTGATTGTGGTTGCAGATACCAGTAGTTACTACTAATACC
TTGATTACCCATCTAAAGGTAGTGCTCACAGCCGTGTCTGCTTCCTTAGG
AGTTGTTTCAACCCATTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1439172..1441290+

>CAN33_18515-T1 ID=CAN33_18515-T1|Name=CAN33_18515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4734bp|location=Sequence derived from alignment at NKJJ01000011.1:1439172..1441290+ (Aspergillus niger FDAARGOS_311)
ATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGACCT
GACTCGCTCTAACAATTTGGACGAGAAGGCCTTTGATGACATGATCAAAG
AGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCCAG
TCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCTCC
CGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCTGG
TTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCCGC
TCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACCAC
CTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGCCC
TTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAACAG
AATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAACCGA
CCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCGTT
TCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAGAG
CTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCAGAC
CATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTCCT
CCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAGACG
GATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACACA
CACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGGAAC
GTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATATG
GCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCCGC
CAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCGACT
TCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGCTC
TCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGACGA
AGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCATGA
CGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTAGC
CGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTCGA
AGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGTCG
GCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCGGT
AACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATGGG
TGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACATGG
CCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTGGT
CTTCCCGGCCTGGGTGGGATGGACCTACAAATGCTCACAGCCGTGTCTGC
TTCCTTAGGAGTTGTTTCAACCCATTAAATGGTCCTTCAGGATCTCGGGC
GGCGAATCAACGCCGCCGTCAATGACCTGACTCGCTCTAACAATTTGGAC
GAGAAGGCCTTTGATGACATGATCAAAGAGATCTGCGCCGCCTTGCTGTC
CGCCGACGTCAACGTCCGCCTGGTCCAGTCCCTCCGCAAATCCATCAAGT
CCAGCGTCAACTTTGCCTCTCTTCCTCCCGCCGTGAACAAGAAGCGTTTG
ATTCAGAAGGCCGTCTTCGATGAGCTGGTTTCCCTGGTTGATCCCCATGC
GGAGCCATTCCGTCCCAAGAAGGGCCGCTCCAACGTGATCATGTTCGTCG
GTCTACAGGGTGCCGGTAAAACCACCACCTGTACCAAGCTGGCCCGCCAC
TATCAGATGCGCGGCTTCAAGACCGCCCTTGTCTGTGCCGATACCTTCCG
AGCTGGTGCTTTCGACCAGCTGAAACAGAATGCCACCAAGGCCAAGATCC
CCTACTACGGTAGCCTGACGCAAACCGACCCCGCCATCGTGGCAGCCGAG
GGTGTGGCCAAGTTCAAGAAGGAGCGTTTCGAAATCATCATTGTCGATAC
CAGTGGTCGTCATAAGCAGGAAGAAGAGCTCTTCACCGAAATGACCCAGA
TTCAGACCGCCGTCACCCCCGACCAGACCATCCTCGTCCTCGACAGCACC
ATCGGTCAGGCTGCCGAAGCCCAGTCCTCCGCCTTCAAGGCCACCGCAGA
CTTCGGAGCCATCATCATCACCAAGACGGATGGTCACGCCGCAGGTGGTG
GTGCTATTTCCGCCGTCGCCGCCACACACACTCCCATTATCTACCTCGGT
ACCGGTGAGCACTTGATGGACCTGGAACGTTTCGAGCCCAAGGCCTTCAT
CCAGAAGCTCCTGGGTATGGGTGATATGGCCGGACTGGTAGAGCACGTAC
AAGCCGTGACCAAGGACTCGGCCTCCGCCAAGGAAACATACAAGCACATC
TCAGAAGGTATCTACACGCTGCGCGACTTCCGCGAGAACATCACCTCCAT
CATGAAGATGGGTCCTCTCTCCAAGCTCTCCGGCATGATTCCCGGTCTCT
CCAACCTGACCGCGGGACTTGATGACGAAGACGGCTCCATGAAGCTCCGC
CGCATGATCTACATTTTCGACAGCATGACGGCCGCCGAACTCGACGGCGA
CGGCAAGATGTTCGTCGAACAGCCTAGCCGCATGGTCCGGATCGCTTGCG
GAAGCGGTACCACCGTCCGCGAAGTCGAAGACCTGCTCTCCCAGCACCGC
ATGATGGCTGGTATGGCCAAGCGCGTCGGCGGACAGAAGAAGCAGATGCA
GCGTGCCCAGAACATGCTCAAGGGCGGTAACAAGGAACAGCAGCTCGCCG
CCATGCAGAAGCGCATGGCCGCCATGGGTGGTGCTGGCGGTGGTGGATTC
CCCGGTATGCCCGGCATGGGCGACATGGCCAAGATGATGCAAATGCTGCA
AGGTCAAGGAGGTGGCGGCGGTGGTGGTCTTCCCGGCCTGGGTGGGATGG
ACCTACAAATGCTCACAGCCGTGTCTGCTTCCTTAGGAGTTGTTTCAACC
CATTAAATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAA
TGACCTGACTCGCTCTAACAATTTGGACGAGAAGGCCTTTGATGACATGA
TCAAAGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTG
GTCCAGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCT
TCCTCCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATG
AGCTGGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAG
GGCCGCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAAC
CACCACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGA
CCGCCCTTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTG
AAACAGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCA
AACCGACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGG
AGCGTTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAA
GAAGAGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGA
CCAGACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCC
AGTCCTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACC
AAGACGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGC
CACACACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACC
TGGAACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGT
GATATGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGC
CTCCGCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGC
GCGACTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCC
AAGCTCTCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGA
TGACGAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACA
GCATGACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAG
CCTAGCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGA
AGTCGAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGC
GCGTCGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAG
GGCGGTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGC
CATGGGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCG
ACATGGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGT
GGTGGTCTTCCCGGCCTGGGTGGGATGGACCTACAAATGCTCACAGCCGT
GTCTGCTTCCTTAGGAGTTGTTTCAACCCATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:00083127S RNA binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18515CAN33_18515Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18515-T1.exon1CAN33_18515-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18515-T1.exon2CAN33_18515-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18515-T1.exon3CAN33_18515-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18515-T1.cdsCAN33_18515-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18515-T1CAN33_18515-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261V9P
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036225
DBxrefInterPro:IPR022941
DBxrefInterPro:IPR036891
DBxrefInterPro:IPR042101
DBxrefInterPro:IPR006325
DBxrefInterPro:IPR004125
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR013822
DBxrefInterPro:IPR000897
DBxrefPFAM:PF02978
DBxrefPFAM:PF02881
DBxrefPFAM:PF00448
DBxrefPFAM:PF02492
Productsignal recognition particle protein SRP54
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1439172..1441290 +
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