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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1708799..1709543+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18790-T1 ID=CAN33_18790-T1|Name=CAN33_18790-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=745bp|location=Sequence derived from alignment at NKJJ01000011.1:1708799..1709543+ (Aspergillus niger FDAARGOS_311)
ATGGCTGGTACAAGGAACTACGACTTTCTGGTAAGTATTGACTAAACTCC
CAAGAAACCATAAGCTAAATGTCGGTCTTTGTAGATCAAGTTACTACTTA
TTGGGGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAA
GACTCGTTCACTCCGTCGTTCATCACTACCATCGGAATCGACTTCAAAAT
ACGTACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATA
CAGCTGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGA
GCCATGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCA
AAGTGAGAAACGCCTTCCTTAAACCTGAGGTGGGTCATAAGATAATTTGA
TGCTAATGCCCAATCACCTTAGACATTCGCACCTGGTTCTCAAATGTCGA
ACAACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTG
ATTGGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCT
AATGAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAA
CATCGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGG
ATACGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAG
CAAGGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1708799..1709543+ >CAN33_18790-T1 ID=CAN33_18790-T1|Name=CAN33_18790-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1863bp|location=Sequence derived from alignment at NKJJ01000011.1:1708799..1709543+ (Aspergillus niger FDAARGOS_311)
ATGGCTGGTACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGG
GGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACT
CGTTCACTCCGTCGTTCATCACTACCATCGGAATCGACTTCAAAATACGT
ACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGC
TGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCA
TGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAAC
ATTCGCACCTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCA
CAAGATCCTTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGT
CAACCGAGCAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTT
GAAGTATCGGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCT
CGCATCCGACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCG
GCTCTCAGGGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGC
GCAGGTGGGAAGTGCTGTTGAATGGCTGGTACAAGGAACTACGACTTTCT
GATCAAGTTACTACTTATTGGGGACTCTGGGGTGGGAAAGTCATGCTGTC
TATTGCGATTCAGTGAAGACTCGTTCACTCCGTCGTTCATCACTACCATC
GGAATCGACTTCAAAATACGTACCATCGAATTGGACGGTAAAAGAGTAAA
GCTCCAGATATGGGATACAGCTGGGCAAGAGCGATTTAGAACTATCACTA
CTGCTTACTACAGAGGAGCCATGGGCATTCTTCTTGTATACGATGTCACT
GATGAAAGATCATTCCAAAACATTCGCACCTGGTTCTCAAATGTCGAACA
ACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTGATT
GGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCTAAT
GAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAACAT
CGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGGATA
CGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAGCAA
GGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGAATGGCTGG
TACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGGGGACTCTG
GGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACTCGTTCACT
CCGTCGTTCATCACTACCATCGGAATCGACTTCAAAATACGTACCATCGA
ATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGCTGGGCAAG
AGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCATGGGCATT
CTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAACATTCGCAC
CTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCACAAGATCC
TTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGTCAACCGAG
CAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTTGAAGTATC
GGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCTCGCATCCG
ACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCGGCTCTCAG
GGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGCGCAGGTGG
GAAGTGCTGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001806 |
| DBxref | InterPro:IPR005225 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF04670 |
| DBxref | PFAM:PF00025 |
| Product | GTPase Ypt2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1708799..1709543 + |
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