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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1730875..1732830- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18830-T1 ID=CAN33_18830-T1|Name=CAN33_18830-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1956bp|location=Sequence derived from alignment at NKJJ01000011.1:1730875..1732830- (Aspergillus niger FDAARGOS_311)
ATGGAACATGACCACTCAGACGCGTCTTATACGAGTACGAAATCATTATC
ACCTGATTCTGGGTCAGGGTCATCGCACGCTGATGCTTCGAACCGTGCAA
AAGGTGGATTAGAAGAAGCTACATTGAACGGACGCATGGTGACTTTTTAC
GAGAATGACAACAACCGCAACCACAATGATAATACAACGCCCACCGAACC
CATACTCCGCGATGCGGTTCTCGAAACCGACCACTTCTCTGGGACTGCGG
CGGGGTCTGCAAGACCAGAGGAATCGGATGTACAAGGACCCATACAGCTA
GGAAGCGACCACAACTCCGCGAGCGACCATATCCCTAGAGAGCCAGATGC
CGATGATCCCGGCCGTGACTCCCGGTCAAGGGACTCAAGCTCGGCCACGA
ACCACAATCTCATCAACAATCCCCCAAATCTTGCACGGATACGCCAAGTA
ATGTTCGAGTGCAAGGATCCCATAGAGATCAGCCTGGAGGAATTTGAGAC
TTATTGGCCGTTCATCGACAATGTATGGGTCAAACAGAGGTCTAATTCCA
GCAAAGAAGGGCATTGCACTACGGACTATTATATGTGTCGACTGCGACGC
CCCACTCATCGTACGTCAGAAACTCGGCCTCTTCCTGAAGGCAAACGCCC
TCGAAAGAAGAGGGTGCGGGAGGGTGGTATCTGCAACTTCCAAATCAAAG
TTGTCAAATTTGAAGGAGCATATTCGACGGTGACAATTGCGAGGACTCCA
GGGAGCAGTCAGGTACATTCGCATGATCTCGATTATATTGACCGAGTGAA
GCGAAATTCTGGACTAATGGAGTTTGCGCGGAGGGAAGCAATCAAGGGCT
ATTTGCCTTCCTCGATCTTCACGAAGTTCCAGGAAGAACCTGAAAAGCTA
ATTGAAGCTGGGGGGAAATTTTGTACAGTGACGGACGTGCGCAACGTCTC
GGCGAAGTGGAGGATACAGAACCCCGACGTTAAACTTGTGGCGCATGAAG
GCTATGAATATCACAAGGGTCATGGCATTGTGAGGATGCGAGCGGCTGAT
GGTATCAGCAATACCCCGGGCGACAAGTTACTATCGAATGCAGCCATACA
CTCATCCTTACCCCCGGATACGCTCTCCTTCCCTCAGTTTCCTTTAGAAT
TTCTTGAGCCTTATCTTCCAAAGCACAATGATCGACGCCAGTTCCCTCAT
GTCACCCTATCCTATGCATCGTCGATGGACTCTAAGATATCACTCCTTCC
AGGCATGCAGACTGTTCTATCTGGACCAGAGGCCAAACTGATGACCCACT
ATCTCAGGTCACGCCATGACGCGATCCTCATTGGAGTTGGAACAGTGCTT
GCAGACAACCCCGGGCTAAACTGTAGGCTGGAAGGTGCAGGCGGGTTCGG
TGGCCTTGGAAGGATGTGGCAACCGCGGCCAGTGGTAGTCGATCCCACAG
GACGATGGCCCGTACATCCAGACTGCCGAATGCTAAGGACTGCAGTAGAA
GGGAAAGGCAAGGCGCCGTGGGTAGTGGTATCTCCGGGGGCCAGGATTGA
CCCGCAGAAGTTGATGATGCTGAAAGGCTACGGGGGTGATTACCTCCGTA
TCATGGAGTACAATCAAAACTGGCGGCTGCGCTGGGAAGCCATACTACGT
GCGCTGGCATCTGAGGGGATCAAAAGCGTCATGATCGAAGGCGGCGGGAC
CGTTTTGAGTGAGCTTTTGAACCCCGAATACACCGAATTCATTGATACTA
TCATTGTTACTGTCGCCCCAACCTATCTTGGTTCTGGTGGAGTAAGTGTG
AGCCCAGATTCCAAGCGGGATCAAGAAGGCAAGCCAAACGCTGCTCTGAA
CCCTAGGGATGTGAAATGGACGCCCCTGGGTCAGAACGTTATAATGTGTG
GGAGAATACGGGTTGCGCCCCCTGCAGAGTCCCCTGCTACCAATGTCGAG
TCGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1730875..1732830- >CAN33_18830-T1 ID=CAN33_18830-T1|Name=CAN33_18830-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1956bp|location=Sequence derived from alignment at NKJJ01000011.1:1730875..1732830- (Aspergillus niger FDAARGOS_311)
ATGGAACATGACCACTCAGACGCGTCTTATACGAGTACGAAATCATTATC
ACCTGATTCTGGGTCAGGGTCATCGCACGCTGATGCTTCGAACCGTGCAA
AAGGTGGATTAGAAGAAGCTACATTGAACGGACGCATGGTGACTTTTTAC
GAGAATGACAACAACCGCAACCACAATGATAATACAACGCCCACCGAACC
CATACTCCGCGATGCGGTTCTCGAAACCGACCACTTCTCTGGGACTGCGG
CGGGGTCTGCAAGACCAGAGGAATCGGATGTACAAGGACCCATACAGCTA
GGAAGCGACCACAACTCCGCGAGCGACCATATCCCTAGAGAGCCAGATGC
CGATGATCCCGGCCGTGACTCCCGGTCAAGGGACTCAAGCTCGGCCACGA
ACCACAATCTCATCAACAATCCCCCAAATCTTGCACGGATACGCCAAGTA
ATGTTCGAGTGCAAGGATCCCATAGAGATCAGCCTGGAGGAATTTGAGAC
TTATTGGCCGTTCATCGACAATGTATGGGTCAAACAGAGGTCTAATTCCA
GCAAAGAAGGGCATTGCACTACGGACTATTATATGTGTCGACTGCGACGC
CCCACTCATCGTACGTCAGAAACTCGGCCTCTTCCTGAAGGCAAACGCCC
TCGAAAGAAGAGGGTGCGGGAGGGTGGTATCTGCAACTTCCAAATCAAAG
TTGTCAAATTTGAAGGAGCATATTCGACGGTGACAATTGCGAGGACTCCA
GGGAGCAGTCAGGTACATTCGCATGATCTCGATTATATTGACCGAGTGAA
GCGAAATTCTGGACTAATGGAGTTTGCGCGGAGGGAAGCAATCAAGGGCT
ATTTGCCTTCCTCGATCTTCACGAAGTTCCAGGAAGAACCTGAAAAGCTA
ATTGAAGCTGGGGGGAAATTTTGTACAGTGACGGACGTGCGCAACGTCTC
GGCGAAGTGGAGGATACAGAACCCCGACGTTAAACTTGTGGCGCATGAAG
GCTATGAATATCACAAGGGTCATGGCATTGTGAGGATGCGAGCGGCTGAT
GGTATCAGCAATACCCCGGGCGACAAGTTACTATCGAATGCAGCCATACA
CTCATCCTTACCCCCGGATACGCTCTCCTTCCCTCAGTTTCCTTTAGAAT
TTCTTGAGCCTTATCTTCCAAAGCACAATGATCGACGCCAGTTCCCTCAT
GTCACCCTATCCTATGCATCGTCGATGGACTCTAAGATATCACTCCTTCC
AGGCATGCAGACTGTTCTATCTGGACCAGAGGCCAAACTGATGACCCACT
ATCTCAGGTCACGCCATGACGCGATCCTCATTGGAGTTGGAACAGTGCTT
GCAGACAACCCCGGGCTAAACTGTAGGCTGGAAGGTGCAGGCGGGTTCGG
TGGCCTTGGAAGGATGTGGCAACCGCGGCCAGTGGTAGTCGATCCCACAG
GACGATGGCCCGTACATCCAGACTGCCGAATGCTAAGGACTGCAGTAGAA
GGGAAAGGCAAGGCGCCGTGGGTAGTGGTATCTCCGGGGGCCAGGATTGA
CCCGCAGAAGTTGATGATGCTGAAAGGCTACGGGGGTGATTACCTCCGTA
TCATGGAGTACAATCAAAACTGGCGGCTGCGCTGGGAAGCCATACTACGT
GCGCTGGCATCTGAGGGGATCAAAAGCGTCATGATCGAAGGCGGCGGGAC
CGTTTTGAGTGAGCTTTTGAACCCCGAATACACCGAATTCATTGATACTA
TCATTGTTACTGTCGCCCCAACCTATCTTGGTTCTGGTGGAGTAAGTGTG
AGCCCAGATTCCAAGCGGGATCAAGAAGGCAAGCCAAACGCTGCTCTGAA
CCCTAGGGATGTGAAATGGACGCCCCTGGGTCAGAACGTTATAATGTGTG
GGAGAATACGGGTTGCGCCCCCTGCAGAGTCCCCTGCTACCAATGTCGAG
TCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009231 | riboflavin biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002734 |
| DBxref | InterPro:IPR024072 |
| DBxref | PFAM:PF01872 |
| Product | RibD C-terminal domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1730875..1732830 - |
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