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CAN33_18880-T1, CAN33_18880-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18880-T1
Unique NameCAN33_18880-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1762406..1764733+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18880-T1 ID=CAN33_18880-T1|Name=CAN33_18880-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2328bp|location=Sequence derived from alignment at NKJJ01000011.1:1762406..1764733+ (Aspergillus niger FDAARGOS_311)
ATGACGGGGAACCAAGGTTCCTTGCGCTGGTCATCGCAGTTGACCGTTGC
TCCAGCCCAGCAAATCCCCAAGCTTTCTGGCGATAAGATCATACTGCCAC
CATCCGCGCTCGAGCAGCTTCTCGCGGCTGCCCCGCTTCAAGAGGTAACT
TCGTCAGGCCCAGCACGCCCATACACCAACACTTTCGATCCCTTTAATCC
GCACACCTTCGCCGCCGAGTCCCAAGCGCGCGAACGGGCGGTGGATCGCC
AGCAGCAATTGCCCCATCCGCTTACGTTCCGCATCGTGAACCCTCAGAAC
GACCGGGTGGTATATGCTGGTGTCCGCGAGTTTTCTGCGCCAGAGAACGA
GATCGGCCTTAGCACATTTTTACGTGGGGCCCTTGGCATTGATGGTACGC
GACAACCGTCACCACACGGCGGTGATGGTAATGATGGTGATGTGACAGAC
AATGCGCCAGCCGCGCCGACCACGGTCACGGTCCATGCGCAACAGTTACC
GAAAGGTACTTATGTCCGCCTGCGCCCTCTAGAAGCCGGGTACGACCCGG
GAAATTGGAAAGCTTTGCTCGAACAACAGCTGCGGGACAATTACACCACC
TTAACCTCTGGAGAGGTCCTCACCGTTGCAGGGGGCCGCAATCAGTCGTT
TCAGTTCTTGGTTGACAAAGTTGAGCCCCATGGCAATGGCATCTGCGTTG
TGGATACGGATCTGGAAGTGGATATTGTCGCCTTGACAGAGGACCAAGCC
AGAGAGACGTTAGAGAAACGGTTGGAGAAATCTTCCCGTGTCTCTGCGAA
TAGGGCAGGCACATCCGTGGGAGGTGAGCTGCGACTCGGTCAGGTAGTAA
GTGGTCAGGTTGCGCTTGGGGACTATGTCGACTACGAGGTCCTTAAATGG
GATCCTTCGAATGCACTGGAACTGTCTGTCAAGGGTGCCGACGATGTAGA
TCTGTGTCTTTTTGCCAGTCCCCTTTCTGCTCGCCAGAGGAACCGACCGC
GGGAGGATGAGCATGTTTTCGGTGACCTCTCAAATCGACCGACTAAACGG
ATTAGGATCCAACCGACGAATGTGGATATGGAAGGCGCTGAGTTGCTGTA
TATATCGGTCCATGCCCCCACTTCCACCGACAGTTCAGGAAATGGACTTT
CGGCGCTGCCGTATAGCCTACAGGTCCATGTGGGCTCGTCACCCGCACAA
GCTGAGAACGCTGCAGACAGCGAGCCAGAAAGTCGTGAACCGGGTGATGT
GCAGTGTAAGAATTGTCGTCAATGGGTACCTGAGCGGACATTGATGCTAC
ATGAGAACTTTTGCCTTCGAAACAACATTCTCTGCCCCCAGTGCCAGAAC
GTGTTCCAGAAACGGTCTCCGGAATGGCAGACACATTGGCATTGTCCTCA
TGACTCGGCTTATGGCACCGGTGACGCCGAAAAGAATCGACATAATCACT
TTTTCCACAGCAAGCGCTCCTGTAGTGGCTGTGGATTCGAGGCGGAGGAC
CTCTCACGTCTCGCTCAACACCGCACAACTGTCTGTCCGGCAAAACCCAT
TCTGTGCCAATTTTGTCATCTTGTGGTCCCTCAAAAGAGTGAATCAGACC
CCGAAATGGACGATCCGGACGTTTTAGTCTCCGGCCTCACACCACATGAA
TTGGTGGACGGTGGCCGGACAACTGAATGCCACCTCTGTGACAAAATCAT
CCGTCTCCGCGACATGAAAATGCACCTTCGCCATCATGATCTAGAACGTC
TGTCTCGACCCACTCCTCGCATATGCTTAAATCAAAATTGCGGACGGACG
CTTGATGGACGCGGTACTCAAACTGCAGTCAACCTCGGTCTATGCAGCAT
CTGCTTTGGACCACTGTACGTAGACACCTACGATCCCGAAGGCAAAGCAC
TCAGGCGGCGCATCGAGCGCCGCTACCTCTCTCAGATGATGAGCGGCTGC
GGCAAACCATGGTGTCAAAACGAATATTGCAAAACGGGCAAACAAGCTAG
ACCATCTTCCACATCTGGTGCGTCTGCCCCGTTGGGCGCGGCAGCTATTC
TAGCCGCAGTGCGGCCTTTGCTTGACGCCGTCAATCTTCGAGGAAATGCA
CCGAACACCGCTCCGTTTTACCTTTGCACGGATCAGACAGGCCAGCAACG
CCGCATCGCTGCAGAAATGCTTTCAACTGAAGGCGCAGTAGCTGACGGCA
AGACCTATGCATTGCCATGGTGCGTTTCCGCCGTTGAAACCACGGCGGGA
AATTTAGACAAGGCGCGAGAGTGGTTGGAAAATTGGGCGCCTGCGCAAGG
GGAAGGCACGGAATCTTTTCAACGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1762406..1764733+

>CAN33_18880-T1 ID=CAN33_18880-T1|Name=CAN33_18880-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4458bp|location=Sequence derived from alignment at NKJJ01000011.1:1762406..1764733+ (Aspergillus niger FDAARGOS_311)
ATGACGGGGAACCAAGGTTCCTTGCGCTGGTCATCGCAGTTGACCGTTGC
TCCAGCCCAGCAAATCCCCAAGCTTTCTGGCGATAAGATCATACTGCCAC
CATCCGCGCTCGAGCAGCTTCTCGCGGCTGCCCCGCTTCAAGAGGTAACT
TCGTCAGGCCCAGCACGCCCATACACCAACACTTTCGATCCCTTTAATCC
GCACACCTTCGCCGCCGAGTCCCAAGCGCGCGAACGGGCGGTGGATCGCC
AGCAGCAATTGCCCCATCCGCTTACGTTCCGCATCGTGAACCCTCAGAAC
GACCGGGTGGTATATGCTGGTGTCCGCGAGTTTTCTGCGCCAGAGAACGA
GATCGGCCTTAGCACATTTTTACGTGGGGCCCTTGGCATTGATGGTACGC
GACAACCGTCACCACACGGCGGTGATGGTAATGATGGTGATGTGACAGAC
AATGCGCCAGCCGCGCCGACCACGGTCACGGTCCATGCGCAACAGTTACC
GAAAGGTACTTATGTCCGCCTGCGCCCTCTAGAAGCCGGGTACGACCCGG
GAAATTGGAAAGCTTTGCTCGAACAACAGCTGCGGGACAATTACACCACC
TTAACCTCTGGAGAGGTCCTCACCGTTGCAGGGGGCCGCAATCAGTCGTT
TCAAGAGACGTTAGAGAAACGGTTGGAGAAATCTTCCCGTGTCTCTGCGA
ATAGGGCAGGCACATCCGTGGGAGGTGAGCTGCGACTCGGTCAGGTAGTA
AGTGGTCAGGTTGCGCTTGGGGACTATGTCGACTACGAGGTCCTTAAATG
GGATCCTTCGAATGCACTGGAACTGTCTGTCAAGGGTGCCGACGATGTAG
ATCTGTGTCTTTTTGCCAGTCCCCTTTCTGCTCGCCAGAGGAACCGACCG
CGGGAGGATGAGCATGTTTTCGGTGACCTCTCAAATCGACCGACTAAACG
GATTAGGATCCAACCGACGAATGTGGATATGGAAGGCGCTGAGTTGCTGT
ATATATCGGTCCATGCCCCCACTTCCACCGACAGTTCAGGAAATGGACTT
TCGGCGCTGCCGTATAGCCTACAGGTCCATGTGGGCTCGTCACCCGCACA
AGCTGAGAACGCTGCAGACAGCGAGCCAGAAAGTCGTGAACCGGGTGATG
TGCAGTGTAAGAATTGTCGTCAATGGGTACCTGAGCGGACATTGATGCTA
CATGAGAACTTTTGCCTTCGAAACAACATTCTCTGCCCCCAGTGCCAGAA
CGTGTTCCAGAAACGGTCTCCGGAATGGCAGACACATTGGCATTGTCCTC
ATGACTCGGCTTATGGCACCGGTGACGCCGAAAAGAATCGACATAATCAC
TTTTTCCACAGCAAGCGCTCCTGTAGTGGCTGTGGATTCGAGGCGGAGGA
CCTCTCACGTCTCGCTCAACACCGCACAACTGTCTGTCCGGCAAAACCCA
TTCTGTGCCAATTTTGTCATCTTGTGGTCCCTCAAAAGAGTGAATCAGAC
CCCGAAATGGACGATCCGGACGTTTTAGTCTCCGGCCTCACACCACATGA
ATTGGTGGACGGTGGCCGGACAACTGAATGCCACCTCTGTGACAAAATCA
TCCGTCTCCGCGACATGAAAATGCACCTTCGCCATCATGATCTAGAACGT
CTGTCTCGACCCACTCCTCGCATATGCTTAAATCAAAATTGCGGACGGAC
GCTTGATGGACGCGGTACTCAAACTGCAGTCAACCTCGGTCTATGCAGCA
TCTGCTTTGGACCACTGTACGTAGACACCTACGATCCCGAAGGCAAAGCA
CTCAGGCGGCGCATCGAGCGCCGCTACCTCTCTCAGATGATGAGCGGCTG
CGGCAAACCATGGTGTCAAAACGAATATTGCAAAACGGGCAAACAAGCTA
GACCATCTTCCACATCTGGTGCGTCTGCCCCGTTGGGCGCGGCAGCTATT
CTAGCCGCAGTGCGGCCTTTGCTTGACGCCGTCAATCTTCGAGGAAATGC
ACCGAACACCGCTCCGTTTTACCTTTGCACGGATCAGACAGGCCAGCAAC
GCCGCATCGCTGCAGAAATGCTTTCAACTGAAGGCGCAGTAGCTGACGGC
AAGACCTATGCATTGCCATGGTGCGTTTCCGCCGTTGAAACCACGGCGGG
AAATTTAGACAAGGCGCGAGAGTGGTTGGAAAATTGGGCGCCTGCGCAAG
GGGAAGGCACGGAATCTTTTCAACGGTAGATGACGGGGAACCAAGGTTCC
TTGCGCTGGTCATCGCAGTTGACCGTTGCTCCAGCCCAGCAAATCCCCAA
GCTTTCTGGCGATAAGATCATACTGCCACCATCCGCGCTCGAGCAGCTTC
TCGCGGCTGCCCCGCTTCAAGAGGTAACTTCGTCAGGCCCAGCACGCCCA
TACACCAACACTTTCGATCCCTTTAATCCGCACACCTTCGCCGCCGAGTC
CCAAGCGCGCGAACGGGCGGTGGATCGCCAGCAGCAATTGCCCCATCCGC
TTACGTTCCGCATCGTGAACCCTCAGAACGACCGGGTGGTATATGCTGGT
GTCCGCGAGTTTTCTGCGCCAGAGAACGAGATCGGCCTTAGCACATTTTT
ACGTGGGGCCCTTGGCATTGATGGTACGCGACAACCGTCACCACACGGCG
GTGATGGTAATGATGGTGATGTGACAGACAATGCGCCAGCCGCGCCGACC
ACGGTCACGGTCCATGCGCAACAGTTACCGAAAGGTACTTATGTCCGCCT
GCGCCCTCTAGAAGCCGGGTACGACCCGGGAAATTGGAAAGCTTTGCTCG
AACAACAGCTGCGGGACAATTACACCACCTTAACCTCTGGAGAGGTCCTC
ACCGTTGCAGGGGGCCGCAATCAGTCGTTTCAAGAGACGTTAGAGAAACG
GTTGGAGAAATCTTCCCGTGTCTCTGCGAATAGGGCAGGCACATCCGTGG
GAGGTGAGCTGCGACTCGGTCAGGTAGTAAGTGGTCAGGTTGCGCTTGGG
GACTATGTCGACTACGAGGTCCTTAAATGGGATCCTTCGAATGCACTGGA
ACTGTCTGTCAAGGGTGCCGACGATGTAGATCTGTGTCTTTTTGCCAGTC
CCCTTTCTGCTCGCCAGAGGAACCGACCGCGGGAGGATGAGCATGTTTTC
GGTGACCTCTCAAATCGACCGACTAAACGGATTAGGATCCAACCGACGAA
TGTGGATATGGAAGGCGCTGAGTTGCTGTATATATCGGTCCATGCCCCCA
CTTCCACCGACAGTTCAGGAAATGGACTTTCGGCGCTGCCGTATAGCCTA
CAGGTCCATGTGGGCTCGTCACCCGCACAAGCTGAGAACGCTGCAGACAG
CGAGCCAGAAAGTCGTGAACCGGGTGATGTGCAGTGTAAGAATTGTCGTC
AATGGGTACCTGAGCGGACATTGATGCTACATGAGAACTTTTGCCTTCGA
AACAACATTCTCTGCCCCCAGTGCCAGAACGTGTTCCAGAAACGGTCTCC
GGAATGGCAGACACATTGGCATTGTCCTCATGACTCGGCTTATGGCACCG
GTGACGCCGAAAAGAATCGACATAATCACTTTTTCCACAGCAAGCGCTCC
TGTAGTGGCTGTGGATTCGAGGCGGAGGACCTCTCACGTCTCGCTCAACA
CCGCACAACTGTCTGTCCGGCAAAACCCATTCTGTGCCAATTTTGTCATC
TTGTGGTCCCTCAAAAGAGTGAATCAGACCCCGAAATGGACGATCCGGAC
GTTTTAGTCTCCGGCCTCACACCACATGAATTGGTGGACGGTGGCCGGAC
AACTGAATGCCACCTCTGTGACAAAATCATCCGTCTCCGCGACATGAAAA
TGCACCTTCGCCATCATGATCTAGAACGTCTGTCTCGACCCACTCCTCGC
ATATGCTTAAATCAAAATTGCGGACGGACGCTTGATGGACGCGGTACTCA
AACTGCAGTCAACCTCGGTCTATGCAGCATCTGCTTTGGACCACTGTACG
TAGACACCTACGATCCCGAAGGCAAAGCACTCAGGCGGCGCATCGAGCGC
CGCTACCTCTCTCAGATGATGAGCGGCTGCGGCAAACCATGGTGTCAAAA
CGAATATTGCAAAACGGGCAAACAAGCTAGACCATCTTCCACATCTGGTG
CGTCTGCCCCGTTGGGCGCGGCAGCTATTCTAGCCGCAGTGCGGCCTTTG
CTTGACGCCGTCAATCTTCGAGGAAATGCACCGAACACCGCTCCGTTTTA
CCTTTGCACGGATCAGACAGGCCAGCAACGCCGCATCGCTGCAGAAATGC
TTTCAACTGAAGGCGCAGTAGCTGACGGCAAGACCTATGCATTGCCATGG
TGCGTTTCCGCCGTTGAAACCACGGCGGGAAATTTAGACAAGGCGCGAGA
GTGGTTGGAAAATTGGGCGCCTGCGCAAGGGGAAGGCACGGAATCTTTTC
AACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18880CAN33_18880Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18880-T1.exon1CAN33_18880-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18880-T1.exon2CAN33_18880-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18880-T1.cdsCAN33_18880-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18880-T1CAN33_18880-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR042556
DBxrefInterPro:IPR004854
DBxrefInterPro:IPR042299
DBxrefInterPro:IPR032353
DBxrefPFAM:PF03152
DBxrefPFAM:PF16558
ProductUbiquitin fusion degradation protein UFD1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1762406..1764733 +
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