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CAN33_18895-T1, CAN33_18895-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18895-T1
Unique NameCAN33_18895-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1768765..1769724+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18895-T1 ID=CAN33_18895-T1|Name=CAN33_18895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=960bp|location=Sequence derived from alignment at NKJJ01000011.1:1768765..1769724+ (Aspergillus niger FDAARGOS_311)
ATGGCGACAAAAGCGGCTTTCAAGCGCGTGCGTTGCGCCCTTTCAAAATG
CGGTCATTTTATTGCATTGTATAACTAACAGATGAACAGCTTACTCGCGA
GTATCAGAACATTCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGT
CAGAGTCCAACATACTCGAGTACGTCATTTACAACAGACTATCACCACCT
GCGTCGCTTGTTTGCGACTAAAGTTGACCTTTCATTCAGATGGCACTACA
TCCTTACGGGACCTCCGGGCACGCCGTATGAAAATGGCCAGTATTGGGGT
ACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCAT
GCACACTCCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCA
TCAGCGACTTTCATCCGAAGTCATTTAATCCCGCATGGGAGGTTTCTACC
ATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGG
AAGCGTGAGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTA
GGTGGTGGAATTCCACTGGTGGCGGTTCCCATGTCAGTGCCACCCCAGGA
GTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGG
TCTGAAGTTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGT
GGATGAAGGATAGTCGCATCGACACCAACACTGGCCAGCTCATGCCTGAT
CCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACC
GAACGGTAGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCG
CCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGCAACAAGATCTGGCTTGGG
TTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGT
TCAAGGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1768765..1769724+

>CAN33_18895-T1 ID=CAN33_18895-T1|Name=CAN33_18895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2484bp|location=Sequence derived from alignment at NKJJ01000011.1:1768765..1769724+ (Aspergillus niger FDAARGOS_311)
ATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCAGAACAT
TCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGTCAGAGTCCAACA
TACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAA
AATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCCGTTTGC
TCCTCCGGCTATTCGCATGCACACTCCTAGCGGTCGTTTTCAACCATCAA
CTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCC
GCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCATGACGAG
CGAGGAGATGACCACCGGAAGCGTGAGTGCATCGGAGGCAGAGCGACGAG
TGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCAT
GTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAACAATGT
GAAAGCTGGAGACGGCGGTCTGAAGTTTCGCTCGGAGTGGCCAGAGCTCG
ACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACT
GGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGAGACAAG
TGCGCTTCGCCGACGACCGAACGGTAGCGCCCCGGGACTCGGTGCGGTGA
TGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGC
AACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACTTCTGAC
CAGGCTAGTGAAAGATGTTCAAGGCTAAATGGCGACAAAAGCGGCTTTCA
AGCGCCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTAC
ATTGTGGCACATCCGTCAGAGTCCAACATACTCGAATGGCACTACATCCT
TACGGGACCTCCGGGCACGCCGTATGAAAATGGCCAGTATTGGGGTACCC
TAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCAC
ACTCCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCATCAG
CGACTTTCATCCGAAGTCATTTAATCCCGCATGGGAGGTTTCTACCATCC
TCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGC
GTGAGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTAGGTG
GTGGAATTCCACTGGTGGCGGTTCCCATGTCAGTGCCACCCCAGGAGTGA
CCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTG
AAGTTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGTGGAT
GAAGGATAGTCGCATCGACACCAACACTGGCCAGCTCATGCCTGATCCCA
GTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAAC
GGTAGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCGCCCG
AGAAGCAGGCCAAAGCTGGGTCCGCCGCAACAAGATCTGGCTTGGGTTTG
CAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAA
GGCTAAATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCA
GAACATTCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGTCAGAGT
CCAACATACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCG
TATGAAAATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCC
GTTTGCTCCTCCGGCTATTCGCATGCACACTCCTAGCGGTCGTTTTCAAC
CATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTT
AATCCCGCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCAT
GACGAGCGAGGAGATGACCACCGGAAGCGTGAGTGCATCGGAGGCAGAGC
GACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGT
TCCCATGTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAA
CAATGTGAAAGCTGGAGACGGCGGTCTGAAGTTTCGCTCGGAGTGGCCAG
AGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACC
AACACTGGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGA
GACAAGTGCGCTTCGCCGACGACCGAACGGTAGCGCCCCGGGACTCGGTG
CGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTC
CGCCGCAACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACT
TCTGACCAGGCTAGTGAAAGATGTTCAAGGCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18895CAN33_18895Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18895-T1.exon1CAN33_18895-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18895-T1.exon2CAN33_18895-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18895-T1.exon3CAN33_18895-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18895-T1.cdsCAN33_18895-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18895-T1CAN33_18895-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1768765..1769724 +
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