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CAN33_18965-T1, CAN33_18965-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18965-T1
Unique NameCAN33_18965-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1801860..1803045-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18965-T1 ID=CAN33_18965-T1|Name=CAN33_18965-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1186bp|location=Sequence derived from alignment at NKJJ01000011.1:1801860..1803045- (Aspergillus niger FDAARGOS_311)
ATGGTGCGTTATTCTATCCAATATTGCTCAAATGGCGTCGCTAGATGGTC
ATTTTGATGATCGGGCGCTATTTTTTTTACAAAAGACCCAATATGCTGAC
CTGGGACCTCGTGGTGGATATAGGCGATCAAGCACAACAACCAGATTCTC
AACCAGCGTGAGTGAACCTGCTCGAGGAAGGATGCGATGGTGGATTGTTT
AATATATCGGGTTACAACTGGCCGGCTGGAATAATATGGACTGATGGGTT
TCGATTTCAGACTTCCACAAGGACTGGCAGCGTCGTGTGCGCGTGCACTT
CGACCAGGTACGCTTTCGAAAGTAAAACCTTTACCCAACCGATTCCTATC
TACAACGAGCGACTCGCCTTTTGGAAAAGAATACGGGAGGGGAAAATTTT
TTCCTATGTGCGTGGTGGACTGACATGTGTTTTTTTCTGCTTCAATAGCC
TGGCCGCAAGCACCGCCGTCGTGAGGCCCGTCTCGCTAAGGCCGCCGCTG
TTGCTCCTCGTCCGGTTGACCAGCTGCGCCCCGTTGTGCGCTGCCCTACC
GTCAAGTACAACCGCCGTGTCCGTGCTGGCCGTGGTTTCACCCTTGCTGA
GCTGAAGGTAAATTTCGTCCCTTGTGTGCAATTCGATGTCACCAGAAACA
AGAAAGGGTGATGGCGATTGGAAAAGAAAGCCCTGGCGACTGGGCAGGAT
GCAAATAAACGGACGGAGGCTTACACGATTATTTTTTTTTTCGCACTATA
GGAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCGGTATCGCCGTTG
ACCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTCGCCAATGTTGCT
CGCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCCCCGCAAGAGCGG
TCAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCAACGCTGCCAAGG
CTGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACCCGTGTCGGTGGT
GCCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGTCACCGAGGTCAA
GCGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACCGCCGGCTGCGTG
AGGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAGAAGCGTGCTAAG
GCCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1801860..1803045-

>CAN33_18965-T1 ID=CAN33_18965-T1|Name=CAN33_18965-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3390bp|location=Sequence derived from alignment at NKJJ01000011.1:1801860..1803045- (Aspergillus niger FDAARGOS_311)
GAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCGGTATCGCCGTTGA
CCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTCGCCAATGTTGCTC
GCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCCCCGCAAGAGCGGT
CAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCAACGCTGCCAAGGC
TGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACCCGTGTCGGTGGTG
CCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGTCACCGAGGTCAAG
CGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACCGCCGGCTGCGTGA
GGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAGAAGCGTGCTAAGG
CCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAGCCTGGCCGCAAGCAC
CGCCGTCGTGAGGCCCGTCTCGCTAAGGCCGCCGCTGTTGCTCCTCGTCC
GGTTGACCAGCTGCGCCCCGTTGTGCGCTGCCCTACCGTCAAGTACAACC
GCCGTGTCCGTGCTGGCCGTGGTTTCACCCTTGCTGAGCTGAAGACTTCC
ACAAGGACTGGCAGCGTCGTGTGCGCGTGCACTTCGACCAGGCGATCAAG
CACAACAACCAGATTCTCAACCAGCATGGAAGCTGGTATCCCCAAGAAGC
TCGCTCGCACCGTCGGTATCGCCGTTGACCACCGCCGTGTCAACTACTCC
AAGGAGTCGCTCGTCGCCAATGTTGCTCGCCTCCAGGACTACAAGGCCCG
CCTGATCCTCTTCCCCCGCAAGAGCGGTCAGTTCAAGAAGCTTGACTCTT
CCGCTGAGGAGGTCAACGCTGCCAAGGCTGCTTTCGCCGAGGGCAAGACC
GAGGGCTTCGCCACCCGTGTCGGTGGTGCCCTCCCCATCAAGAACGCCAC
TCTCGAGGAGGCTGTCACCGAGGTCAAGCGTGACGACCTTCCCAAGGGCG
AGGAGGCTGCTTACCGCCGGCTGCGTGAGGCCCGCAGCGAGGCCCGCTAC
AAGGGTATCCGGGAGAAGCGTGCTAAGGCCAAGGCTGAGGAGGAGTCTGC
CGCTAAGAAATAGCCTGGCCGCAAGCACCGCCGTCGTGAGGCCCGTCTCG
CTAAGGCCGCCGCTGTTGCTCCTCGTCCGGTTGACCAGCTGCGCCCCGTT
GTGCGCTGCCCTACCGTCAAGTACAACCGCCGTGTCCGTGCTGGCCGTGG
TTTCACCCTTGCTGAGCTGAAGACTTCCACAAGGACTGGCAGCGTCGTGT
GCGCGTGCACTTCGACCAGGCGATCAAGCACAACAACCAGATTCTCAACC
AGCATGGAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCGGTATCGC
CGTTGACCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTCGCCAATG
TTGCTCGCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCCCCGCAAG
AGCGGTCAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCAACGCTGC
CAAGGCTGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACCCGTGTCG
GTGGTGCCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGTCACCGAG
GTCAAGCGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACCGCCGGCT
GCGTGAGGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAGAAGCGTG
CTAAGGCCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAGCCTGGCCGC
AAGCACCGCCGTCGTGAGGCCCGTCTCGCTAAGGCCGCCGCTGTTGCTCC
TCGTCCGGTTGACCAGCTGCGCCCCGTTGTGCGCTGCCCTACCGTCAAGT
ACAACCGCCGTGTCCGTGCTGGCCGTGGTTTCACCCTTGCTGAGCTGAAG
ACTTCCACAAGGACTGGCAGCGTCGTGTGCGCGTGCACTTCGACCAGGCG
ATCAAGCACAACAACCAGATTCTCAACCAGCATGGAAGCTGGTATCCCCA
AGAAGCTCGCTCGCACCGTCGGTATCGCCGTTGACCACCGCCGTGTCAAC
TACTCCAAGGAGTCGCTCGTCGCCAATGTTGCTCGCCTCCAGGACTACAA
GGCCCGCCTGATCCTCTTCCCCCGCAAGAGCGGTCAGTTCAAGAAGCTTG
ACTCTTCCGCTGAGGAGGTCAACGCTGCCAAGGCTGCTTTCGCCGAGGGC
AAGACCGAGGGCTTCGCCACCCGTGTCGGTGGTGCCCTCCCCATCAAGAA
CGCCACTCTCGAGGAGGCTGTCACCGAGGTCAAGCGTGACGACCTTCCCA
AGGGCGAGGAGGCTGCTTACCGCCGGCTGCGTGAGGCCCGCAGCGAGGCC
CGCTACAAGGGTATCCGGGAGAAGCGTGCTAAGGCCAAGGCTGAGGAGGA
GTCTGCCGCTAAGAAATAGCCTGGCCGCAAGCACCGCCGTCGTGAGGCCC
GTCTCGCTAAGGCCGCCGCTGTTGCTCCTCGTCCGGTTGACCAGCTGCGC
CCCGTTGTGCGCTGCCCTACCGTCAAGTACAACCGCCGTGTCCGTGCTGG
CCGTGGTTTCACCCTTGCTGAGCTGAAGACTTCCACAAGGACTGGCAGCG
TCGTGTGCGCGTGCACTTCGACCAGGCGATCAAGCACAACAACCAGATTC
TCAACCAGCATGGAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCGG
TATCGCCGTTGACCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTCG
CCAATGTTGCTCGCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCCC
CGCAAGAGCGGTCAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCAA
CGCTGCCAAGGCTGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACCC
GTGTCGGTGGTGCCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGTC
ACCGAGGTCAAGCGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACCG
CCGGCTGCGTGAGGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAGA
AGCGTGCTAAGGCCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAGCCT
GGCCGCAAGCACCGCCGTCGTGAGGCCCGTCTCGCTAAGGCCGCCGCTGT
TGCTCCTCGTCCGGTTGACCAGCTGCGCCCCGTTGTGCGCTGCCCTACCG
TCAAGTACAACCGCCGTGTCCGTGCTGGCCGTGGTTTCACCCTTGCTGAG
CTGAAGACTTCCACAAGGACTGGCAGCGTCGTGTGCGCGTGCACTTCGAC
CAGGCGATCAAGCACAACAACCAGATTCTCAACCAGCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18965CAN33_18965Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18965-T1CAN33_18965-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18965-T1.cdsCAN33_18965-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18965-T1.exon5CAN33_18965-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_18965-T1.exon4CAN33_18965-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_18965-T1.exon3CAN33_18965-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18965-T1.exon2CAN33_18965-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18965-T1.exon1CAN33_18965-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR018256
DBxrefInterPro:IPR001380
DBxrefPFAM:PF01294
ProductRibosomal protein L13e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1801860..1803045 -
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