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CAN33_18995-T1, CAN33_18995-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18995-T1
Unique NameCAN33_18995-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1817511..1818726-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18995-T1 ID=CAN33_18995-T1|Name=CAN33_18995-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1216bp|location=Sequence derived from alignment at NKJJ01000011.1:1817511..1818726- (Aspergillus niger FDAARGOS_311)
ATGCTATTTTCATCATTGCGCTCTCTCTCTCACCGGGGCCCCTCACTGGC
CTCGCGGGCCTTCAGCACCTCCCCCGCCGTCCATGCCGCCGAGGTTAAGT
CGCTGGGTGTGATAGGAGCTGGGCAGATGGTCAGTGTGTTCCTGACAATA
TGATGTTCCCTCCAGTGAGAGAAACAGGGCAACTAAGATTCTATAGGGAT
TAGGAATTGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTA
ATCGACAACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCCGGTAC
ACAGCACCCACTCTTCTTCTCTCCCTCACCATCTTTCCAATTTCATTTAA
CTAAACCACTACATTCTTCCAGACAAACTCCTCGATAAAGATGTATCAAA
AGAACGCCTCACCCGGGACGCCGCCGATGCCGCCCGGGCACGCATCACCC
CAAGCCTGAAAATGGACGACCTCTCCAGCGTCGACTTCGTCATCGAAGCC
GTCCCCGAGATCCCCGACCTCAAGACCTCTATCTTCTCAAAACTCGCCCA
AATTGCCCCTAAGCACGCCATCCTCGCTACTAACACCTCCTCCATCTCCA
TCACCAAGATCGCAGCCGCCACCACAACAGACCCCACGGACCTGCAGGCC
CCCTCGCGTGTCATCTCCACGCATTTCATGAACCCCGTCCCCGTGCAAAA
GGGCGTAGAGATCATCGCAGGCTTGCAGACTTCCCAGGCCACGAAAGATA
ACGCCATCGCTTTCGTCCAGCGCATGGGCAAAGTCGCTTCTGTTTCTGCG
GATTCGCCTGGTTTCCTGGCAAACCGAATCCTCATGCCGTATATAAATGA
GGCCATCATCTGTCTGGAGACGGGCGTTGGTGGCCGTGAGGATATTGATA
ATATCATGAAGACGGGCACAAATGTGCCTATGGGTCCGTTGGTGTTGGCG
GATTTTATTGGTCTGGATACTTGTCTCGCCATTATGAATGTCTTGCACCA
GGAGACTGGTGATAGTAAGTATCGGCCGTCCGGGCTATTGAAGCGTATGG
TTGATGCTGGGTGGCTGGGCAAGAAGTCTGGAAAGGGTTTCTATGATTAC
TGATTGATTGATCGATTCAATCATCTCTGTATCTATCCAAGCGAACGTTG
CGATATCCCTCCCTTATATACTGTGATGTCTTAGAAATTATGTACCCCGT
TTTGGTGTCTTATTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1817511..1818726-

>CAN33_18995-T1 ID=CAN33_18995-T1|Name=CAN33_18995-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3900bp|location=Sequence derived from alignment at NKJJ01000011.1:1817511..1818726- (Aspergillus niger FDAARGOS_311)
AAATTATGTACCCCGTTTTGGTGTCTTATTGAACAAACTCCTCGATAAAG
ATGTATCAAAAGAACGCCTCACCCGGGACGCCGCCGATGCCGCCCGGGCA
CGCATCACCCCAAGCCTGAAAATGGACGACCTCTCCAGCGTCGACTTCGT
CATCGAAGCCGTCCCCGAGATCCCCGACCTCAAGACCTCTATCTTCTCAA
AACTCGCCCAAATTGCCCCTAAGCACGCCATCCTCGCTACTAACACCTCC
TCCATCTCCATCACCAAGATCGCAGCCGCCACCACAACAGACCCCACGGA
CCTGCAGGCCCCCTCGCGTGTCATCTCCACGCATTTCATGAACCCCGTCC
CCGTGCAAAAGGGCGTAGAGATCATCGCAGGCTTGCAGACTTCCCAGGCC
ACGAAAGATAACGCCATCGCTTTCGTCCAGCGCATGGGCAAAGTCGCTTC
TGTTTCTGCGGATTCGCCTGGTTTCCTGGCAAACCGAATCCTCATGCCGT
ATATAAATGAGGCCATCATCTGTCTGGAGACGGGCGTTGGTGGCCGTGAG
GATATTGATAATATCATGAAGACGGGCACAAATGTGCCTATGGGTCCGTT
GGTGTTGGCGGATTTTATTGGTCTGGATACTTGTCTCGCCATTATGAATG
TCTTGCACCAGGAGACTGGTGATAGTAAGTATCGGCCGTCCGGGCTATTG
AAGCGTATGGTTGATGCTGGGTGGCTGGGCAAGAAGTCTGGAAAGGGGAT
TAGGAATTGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTA
ATCGACAACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCCGATGC
TATTTTCATCATTGCGCTCTCTCTCTCACCGGGGCCCCTCACTGGCCTCG
CGGGCCTTCAGCACCTCCCCCGCCGTCCATGCCGCCGAGGTTAAGTCGCT
GGGTGTGATAGGAGCTGGGCAGATGAAATTATGTACCCCGTTTTGGTGTC
TTATTGAACAAACTCCTCGATAAAGATGTATCAAAAGAACGCCTCACCCG
GGACGCCGCCGATGCCGCCCGGGCACGCATCACCCCAAGCCTGAAAATGG
ACGACCTCTCCAGCGTCGACTTCGTCATCGAAGCCGTCCCCGAGATCCCC
GACCTCAAGACCTCTATCTTCTCAAAACTCGCCCAAATTGCCCCTAAGCA
CGCCATCCTCGCTACTAACACCTCCTCCATCTCCATCACCAAGATCGCAG
CCGCCACCACAACAGACCCCACGGACCTGCAGGCCCCCTCGCGTGTCATC
TCCACGCATTTCATGAACCCCGTCCCCGTGCAAAAGGGCGTAGAGATCAT
CGCAGGCTTGCAGACTTCCCAGGCCACGAAAGATAACGCCATCGCTTTCG
TCCAGCGCATGGGCAAAGTCGCTTCTGTTTCTGCGGATTCGCCTGGTTTC
CTGGCAAACCGAATCCTCATGCCGTATATAAATGAGGCCATCATCTGTCT
GGAGACGGGCGTTGGTGGCCGTGAGGATATTGATAATATCATGAAGACGG
GCACAAATGTGCCTATGGGTCCGTTGGTGTTGGCGGATTTTATTGGTCTG
GATACTTGTCTCGCCATTATGAATGTCTTGCACCAGGAGACTGGTGATAG
TAAGTATCGGCCGTCCGGGCTATTGAAGCGTATGGTTGATGCTGGGTGGC
TGGGCAAGAAGTCTGGAAAGGGGATTAGGAATTGCTCTAGTAGCTGCCCA
GAAAGCCCAAGTCCCGGTGACCCTAATCGACAACTCCCAAGCATCCATCG
ACAAGGGCCTCAAGTTTGCCGATGCTATTTTCATCATTGCGCTCTCTCTC
TCACCGGGGCCCCTCACTGGCCTCGCGGGCCTTCAGCACCTCCCCCGCCG
TCCATGCCGCCGAGGTTAAGTCGCTGGGTGTGATAGGAGCTGGGCAGATG
AAATTATGTACCCCGTTTTGGTGTCTTATTGAACAAACTCCTCGATAAAG
ATGTATCAAAAGAACGCCTCACCCGGGACGCCGCCGATGCCGCCCGGGCA
CGCATCACCCCAAGCCTGAAAATGGACGACCTCTCCAGCGTCGACTTCGT
CATCGAAGCCGTCCCCGAGATCCCCGACCTCAAGACCTCTATCTTCTCAA
AACTCGCCCAAATTGCCCCTAAGCACGCCATCCTCGCTACTAACACCTCC
TCCATCTCCATCACCAAGATCGCAGCCGCCACCACAACAGACCCCACGGA
CCTGCAGGCCCCCTCGCGTGTCATCTCCACGCATTTCATGAACCCCGTCC
CCGTGCAAAAGGGCGTAGAGATCATCGCAGGCTTGCAGACTTCCCAGGCC
ACGAAAGATAACGCCATCGCTTTCGTCCAGCGCATGGGCAAAGTCGCTTC
TGTTTCTGCGGATTCGCCTGGTTTCCTGGCAAACCGAATCCTCATGCCGT
ATATAAATGAGGCCATCATCTGTCTGGAGACGGGCGTTGGTGGCCGTGAG
GATATTGATAATATCATGAAGACGGGCACAAATGTGCCTATGGGTCCGTT
GGTGTTGGCGGATTTTATTGGTCTGGATACTTGTCTCGCCATTATGAATG
TCTTGCACCAGGAGACTGGTGATAGTAAGTATCGGCCGTCCGGGCTATTG
AAGCGTATGGTTGATGCTGGGTGGCTGGGCAAGAAGTCTGGAAAGGGGAT
TAGGAATTGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTA
ATCGACAACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCCGATGC
TATTTTCATCATTGCGCTCTCTCTCTCACCGGGGCCCCTCACTGGCCTCG
CGGGCCTTCAGCACCTCCCCCGCCGTCCATGCCGCCGAGGTTAAGTCGCT
GGGTGTGATAGGAGCTGGGCAGATGAAATTATGTACCCCGTTTTGGTGTC
TTATTGAACAAACTCCTCGATAAAGATGTATCAAAAGAACGCCTCACCCG
GGACGCCGCCGATGCCGCCCGGGCACGCATCACCCCAAGCCTGAAAATGG
ACGACCTCTCCAGCGTCGACTTCGTCATCGAAGCCGTCCCCGAGATCCCC
GACCTCAAGACCTCTATCTTCTCAAAACTCGCCCAAATTGCCCCTAAGCA
CGCCATCCTCGCTACTAACACCTCCTCCATCTCCATCACCAAGATCGCAG
CCGCCACCACAACAGACCCCACGGACCTGCAGGCCCCCTCGCGTGTCATC
TCCACGCATTTCATGAACCCCGTCCCCGTGCAAAAGGGCGTAGAGATCAT
CGCAGGCTTGCAGACTTCCCAGGCCACGAAAGATAACGCCATCGCTTTCG
TCCAGCGCATGGGCAAAGTCGCTTCTGTTTCTGCGGATTCGCCTGGTTTC
CTGGCAAACCGAATCCTCATGCCGTATATAAATGAGGCCATCATCTGTCT
GGAGACGGGCGTTGGTGGCCGTGAGGATATTGATAATATCATGAAGACGG
GCACAAATGTGCCTATGGGTCCGTTGGTGTTGGCGGATTTTATTGGTCTG
GATACTTGTCTCGCCATTATGAATGTCTTGCACCAGGAGACTGGTGATAG
TAAGTATCGGCCGTCCGGGCTATTGAAGCGTATGGTTGATGCTGGGTGGC
TGGGCAAGAAGTCTGGAAAGGGGATTAGGAATTGCTCTAGTAGCTGCCCA
GAAAGCCCAAGTCCCGGTGACCCTAATCGACAACTCCCAAGCATCCATCG
ACAAGGGCCTCAAGTTTGCCGATGCTATTTTCATCATTGCGCTCTCTCTC
TCACCGGGGCCCCTCACTGGCCTCGCGGGCCTTCAGCACCTCCCCCGCCG
TCCATGCCGCCGAGGTTAAGTCGCTGGGTGTGATAGGAGCTGGGCAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0070403NAD+ binding
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18995CAN33_18995Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18995-T1CAN33_18995-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18995-T1.cdsCAN33_18995-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18995-T1.exon4CAN33_18995-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_18995-T1.exon3CAN33_18995-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18995-T1.exon2CAN33_18995-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18995-T1.exon1CAN33_18995-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR006180
DBxrefInterPro:IPR006176
DBxrefInterPro:IPR022694
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR013328
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Product3-hydroxyacyl-CoA dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1817511..1818726 -
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