You are here

Home

CAN33_1910-T1, CAN33_1910-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1910-T1
Unique NameCAN33_1910-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1168032..1168969-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1910-T1 ID=CAN33_1910-T1|Name=CAN33_1910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=938bp|location=Sequence derived from alignment at NKJJ01000004.1:1168032..1168969- (Aspergillus niger FDAARGOS_311)
ATGGCGGACAGCGAATTCTCCCCCAAGTTCGCTCCGTTCTTTTCCTTCGT
ACGTTGCTCCTTTATTATACCTCTTCGCAGAAGTTATGACGCGACGAATA
TCATTTGCTAACTCACCAAAACAGGCAGGTATTGCGGCAGCTGTGAGTAT
CAACTACACGCCACCCGTTCCGATCACCGCACGCTAACCACCTCTCCAAA
GATGATCTTCGGATGTATGTCGACTCGCAAAGCTGGAGGTATTGATTAAT
TGTTACGAGAACATCTCAGCTCACTTCATTTAGCAATGGGAGCCGCATAT
GGAACGGCGAAGTCAGGAATTGGTATCTCCGGAGTGGGAACCTTCAGGCC
GGACCTGATCATGAAGGTATATTAGACCTGTTTTAGCTTTGTGTCGCGTT
TTATCGCATTATATTTGCTTGTGCTAACCTGTGCAGTCCTTAATTCCGGT
TGTCATGTCCGGTATTATTGCAGTTTACGGCCTCGTCATCTCGGTCCTCA
TTGCCGGTGACATGGATCCTCCCCCGAACAAGCATATGAGCCTTTACACG
TACGTTTCCCGATATTCCGCCTCAGCTCATAAATAAAGTTGTCTGATGAT
ATTGTTTTGAAAGTGGCTTCATGCACCTTGCTGCGGGGTTGTCGGTTGGC
CTCGCAGGCGTGGCTGCCGGTTATACTATTGGAGTTGTCGGAGATGCGGT
AAGCAGTCATTGCGAGGAATCTCTGGATGGGAGTGCACAGCTGCTAATGA
TGGATACAGGGTGTTCGTGCGTACATGCAGCAATCTCGAGTTTATGTCGG
TATGATTCTTATCTTGATTTTTGGCGAGGTTCTTGGTCTCTACGGGTATG
TGCACATCCACTACAGCAGACAAGATTTCATACTTACTCCCATAGATTGA
TTGTTGGCTTGATTCTCAACTCCAAAAGCTCTGGCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1168032..1168969-

>CAN33_1910-T1 ID=CAN33_1910-T1|Name=CAN33_1910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3912bp|location=Sequence derived from alignment at NKJJ01000004.1:1168032..1168969- (Aspergillus niger FDAARGOS_311)
ATTGATTGTTGGCTTGATTCTCAACTCCAAAAGCTCTGGCTGAGGTGTTC
GTGCGTACATGCAGCAATCTCGAGTTTATGTCGGTATGATTCTTATCTTG
ATTTTTGGCGAGGTTCTTGGTCTCTACGGTGGCTTCATGCACCTTGCTGC
GGGGTTGTCGGTTGGCCTCGCAGGCGTGGCTGCCGGTTATACTATTGGAG
TTGTCGGAGATGCGTCCTTAATTCCGGTTGTCATGTCCGGTATTATTGCA
GTTTACGGCCTCGTCATCTCGGTCCTCATTGCCGGTGACATGGATCCTCC
CCCGAACAAGCATATGAGCCTTTACACCAATGGGAGCCGCATATGGAACG
GCGAAGTCAGGAATTGGTATCTCCGGAGTGGGAACCTTCAGGCCGGACCT
GATCATGAAGATGATCTTCGGATGCAGGTATTGCGGCAGCTATGGCGGAC
AGCGAATTCTCCCCCAAGTTCGCTCCGTTCTTTTCCTTCATTGATTGTTG
GCTTGATTCTCAACTCCAAAAGCTCTGGCTGAGGTGTTCGTGCGTACATG
CAGCAATCTCGAGTTTATGTCGGTATGATTCTTATCTTGATTTTTGGCGA
GGTTCTTGGTCTCTACGGTGGCTTCATGCACCTTGCTGCGGGGTTGTCGG
TTGGCCTCGCAGGCGTGGCTGCCGGTTATACTATTGGAGTTGTCGGAGAT
GCGTCCTTAATTCCGGTTGTCATGTCCGGTATTATTGCAGTTTACGGCCT
CGTCATCTCGGTCCTCATTGCCGGTGACATGGATCCTCCCCCGAACAAGC
ATATGAGCCTTTACACCAATGGGAGCCGCATATGGAACGGCGAAGTCAGG
AATTGGTATCTCCGGAGTGGGAACCTTCAGGCCGGACCTGATCATGAAGA
TGATCTTCGGATGCAGGTATTGCGGCAGCTATGGCGGACAGCGAATTCTC
CCCCAAGTTCGCTCCGTTCTTTTCCTTCATTGATTGTTGGCTTGATTCTC
AACTCCAAAAGCTCTGGCTGAGGTGTTCGTGCGTACATGCAGCAATCTCG
AGTTTATGTCGGTATGATTCTTATCTTGATTTTTGGCGAGGTTCTTGGTC
TCTACGGTGGCTTCATGCACCTTGCTGCGGGGTTGTCGGTTGGCCTCGCA
GGCGTGGCTGCCGGTTATACTATTGGAGTTGTCGGAGATGCGTCCTTAAT
TCCGGTTGTCATGTCCGGTATTATTGCAGTTTACGGCCTCGTCATCTCGG
TCCTCATTGCCGGTGACATGGATCCTCCCCCGAACAAGCATATGAGCCTT
TACACCAATGGGAGCCGCATATGGAACGGCGAAGTCAGGAATTGGTATCT
CCGGAGTGGGAACCTTCAGGCCGGACCTGATCATGAAGATGATCTTCGGA
TGCAGGTATTGCGGCAGCTATGGCGGACAGCGAATTCTCCCCCAAGTTCG
CTCCGTTCTTTTCCTTCATTGATTGTTGGCTTGATTCTCAACTCCAAAAG
CTCTGGCTGAGGTGTTCGTGCGTACATGCAGCAATCTCGAGTTTATGTCG
GTATGATTCTTATCTTGATTTTTGGCGAGGTTCTTGGTCTCTACGGTGGC
TTCATGCACCTTGCTGCGGGGTTGTCGGTTGGCCTCGCAGGCGTGGCTGC
CGGTTATACTATTGGAGTTGTCGGAGATGCGTCCTTAATTCCGGTTGTCA
TGTCCGGTATTATTGCAGTTTACGGCCTCGTCATCTCGGTCCTCATTGCC
GGTGACATGGATCCTCCCCCGAACAAGCATATGAGCCTTTACACCAATGG
GAGCCGCATATGGAACGGCGAAGTCAGGAATTGGTATCTCCGGAGTGGGA
ACCTTCAGGCCGGACCTGATCATGAAGATGATCTTCGGATGCAGGTATTG
CGGCAGCTATGGCGGACAGCGAATTCTCCCCCAAGTTCGCTCCGTTCTTT
TCCTTCATTGATTGTTGGCTTGATTCTCAACTCCAAAAGCTCTGGCTGAG
GTGTTCGTGCGTACATGCAGCAATCTCGAGTTTATGTCGGTATGATTCTT
ATCTTGATTTTTGGCGAGGTTCTTGGTCTCTACGGTGGCTTCATGCACCT
TGCTGCGGGGTTGTCGGTTGGCCTCGCAGGCGTGGCTGCCGGTTATACTA
TTGGAGTTGTCGGAGATGCGTCCTTAATTCCGGTTGTCATGTCCGGTATT
ATTGCAGTTTACGGCCTCGTCATCTCGGTCCTCATTGCCGGTGACATGGA
TCCTCCCCCGAACAAGCATATGAGCCTTTACACCAATGGGAGCCGCATAT
GGAACGGCGAAGTCAGGAATTGGTATCTCCGGAGTGGGAACCTTCAGGCC
GGACCTGATCATGAAGATGATCTTCGGATGCAGGTATTGCGGCAGCTATG
GCGGACAGCGAATTCTCCCCCAAGTTCGCTCCGTTCTTTTCCTTCATTGA
TTGTTGGCTTGATTCTCAACTCCAAAAGCTCTGGCTGAGGTGTTCGTGCG
TACATGCAGCAATCTCGAGTTTATGTCGGTATGATTCTTATCTTGATTTT
TGGCGAGGTTCTTGGTCTCTACGGTGGCTTCATGCACCTTGCTGCGGGGT
TGTCGGTTGGCCTCGCAGGCGTGGCTGCCGGTTATACTATTGGAGTTGTC
GGAGATGCGTCCTTAATTCCGGTTGTCATGTCCGGTATTATTGCAGTTTA
CGGCCTCGTCATCTCGGTCCTCATTGCCGGTGACATGGATCCTCCCCCGA
ACAAGCATATGAGCCTTTACACCAATGGGAGCCGCATATGGAACGGCGAA
GTCAGGAATTGGTATCTCCGGAGTGGGAACCTTCAGGCCGGACCTGATCA
TGAAGATGATCTTCGGATGCAGGTATTGCGGCAGCTATGGCGGACAGCGA
ATTCTCCCCCAAGTTCGCTCCGTTCTTTTCCTTCATTGATTGTTGGCTTG
ATTCTCAACTCCAAAAGCTCTGGCTGAGGTGTTCGTGCGTACATGCAGCA
ATCTCGAGTTTATGTCGGTATGATTCTTATCTTGATTTTTGGCGAGGTTC
TTGGTCTCTACGGTGGCTTCATGCACCTTGCTGCGGGGTTGTCGGTTGGC
CTCGCAGGCGTGGCTGCCGGTTATACTATTGGAGTTGTCGGAGATGCGTC
CTTAATTCCGGTTGTCATGTCCGGTATTATTGCAGTTTACGGCCTCGTCA
TCTCGGTCCTCATTGCCGGTGACATGGATCCTCCCCCGAACAAGCATATG
AGCCTTTACACCAATGGGAGCCGCATATGGAACGGCGAAGTCAGGAATTG
GTATCTCCGGAGTGGGAACCTTCAGGCCGGACCTGATCATGAAGATGATC
TTCGGATGCAGGTATTGCGGCAGCTATGGCGGACAGCGAATTCTCCCCCA
AGTTCGCTCCGTTCTTTTCCTTCATTGATTGTTGGCTTGATTCTCAACTC
CAAAAGCTCTGGCTGAGGTGTTCGTGCGTACATGCAGCAATCTCGAGTTT
ATGTCGGTATGATTCTTATCTTGATTTTTGGCGAGGTTCTTGGTCTCTAC
GGTGGCTTCATGCACCTTGCTGCGGGGTTGTCGGTTGGCCTCGCAGGCGT
GGCTGCCGGTTATACTATTGGAGTTGTCGGAGATGCGTCCTTAATTCCGG
TTGTCATGTCCGGTATTATTGCAGTTTACGGCCTCGTCATCTCGGTCCTC
ATTGCCGGTGACATGGATCCTCCCCCGAACAAGCATATGAGCCTTTACAC
CAATGGGAGCCGCATATGGAACGGCGAAGTCAGGAATTGGTATCTCCGGA
GTGGGAACCTTCAGGCCGGACCTGATCATGAAGATGATCTTCGGATGCAG
GTATTGCGGCAGCTATGGCGGACAGCGAATTCTCCCCCAAGTTCGCTCCG
TTCTTTTCCTTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA11CAN33_1910Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1910-T1CAN33_1910-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1910-T1.cdsCAN33_1910-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1910-T1.exon8CAN33_1910-T1.exon8Aspergillus niger FDAARGOS_311exon
CAN33_1910-T1.exon7CAN33_1910-T1.exon7Aspergillus niger FDAARGOS_311exon
CAN33_1910-T1.exon6CAN33_1910-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_1910-T1.exon5CAN33_1910-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_1910-T1.exon4CAN33_1910-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_1910-T1.exon3CAN33_1910-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_1910-T1.exon2CAN33_1910-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1910-T1.exon1CAN33_1910-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR011555
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
Productv-type proton ATPase 16 kDa proteolipid subunit 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1168032..1168969 -
Powered by Drupal