You are here

Home

CAN33_19180-T1, CAN33_19180-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19180-T1
Unique NameCAN33_19180-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1940281..1941592+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19180-T1 ID=CAN33_19180-T1|Name=CAN33_19180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1312bp|location=Sequence derived from alignment at NKJJ01000011.1:1940281..1941592+ (Aspergillus niger FDAARGOS_311)
ATGCTGGCGGAGCTGCCGGTCGAGCAGAACATCCGCGCCAGACTGACTCG
CCGCAACAACTCCCTGCTTCTTCACACGGCCCTCTTCACCACCCTCCTAG
TAGTCCAGGGTCACGTCTCAGTGAGTTTGTCAGTGGCTGACCAGTTATAA
TTAGCCTGGCCTTCACGAGCTCCGGCGGGTTCTCCCTTATATACCAGCAG
CAACAGCAACCCCTCCATCGCGGGGTAACCGGCCGCAGTAAGTGATACAA
CATCGCGTATCATCACGACTTCAGTCCACCACATCTACAAGTTGATCACC
TACTAATACCTCTCCAGATGCCCTTCACTCATCACAGCCACTCCGGGCAA
TTCTGCCCCGGCCACGCCAAAGACAACTTGGAAGAAATCATCCAGCTCGC
CATATCCAAGAAATTCCACACCTTCTGCCTAACAGAGCACATGCCCCGCC
ATGAAGAAGATTTCTACCCAGAAGAGGTATGTAACCCATCTTATCTACGA
TACACCCTACCCGATAACCTAACTAAAACAACTAACCAACCCAGATCGAA
GCCGGCGACACCGAATCCAGCCACGTAGCCAACGAGGCCGCCTACTTCGC
CGAAGCCACGCGCCTCCGAACCAAATACGCCGATCAAATCAACATCCTCA
TCGGATTCGAGATCGACTGGATCCGGCCGGCCTCGCGACAGCTAATCGAG
GAGTCTCTGTCGCGGCACCCGTTCGAGTTCTTCATGGGTTCCGTGCACCA
TACATTGACCGTCCCCATAGACTATGACCGGCCGCTGTATGAGAAGGCGC
GCGCACTAGCCGGTGGAACGGACGAGTTGCTCTTCGAGGCGTACTTTGAT
GAGCAGCTGGATATGCTGAAGCAGGTGAAGCCGGTGGTGGTGGGGCATTT
TGATCTGATTCGGCTGAAGAGCGATGACCCCGATCGGAGTTTTCAGGACT
ATCCGAGGGTGTGGGAGAAGATTCTACGAAATTTGGACTACGTGGCGGGA
TATGGGGGTCTGTTGGAGGTTAATTCGGCGGCGTTGAGGAAGGGCATGAA
GGAGCCGTATCCGAATGGGGAGATTTGTAAGGAATTCCTGGCTCGCGGAG
GTCGGTTCTGTCTGTCGGATGATAGTCATGGATTGGCGCAGGTTGGGCTG
AATTTCCATCGCGTGGTGCCGTTCTTGGAGCAGGTGGGTGTGTCGAGGCT
GCATTATTTGGCACTGGGGGAGGGTGATGCGCCCGTTGATGCACGGTTTC
CTCGGACGCAGATCAAGGAGGTGACATTGGAGGAGGTGAAGAATATGTCG
TTTTGGAGGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:1940281..1941592+

>CAN33_19180-T1 ID=CAN33_19180-T1|Name=CAN33_19180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3141bp|location=Sequence derived from alignment at NKJJ01000011.1:1940281..1941592+ (Aspergillus niger FDAARGOS_311)
ATGCTGGCGGAGCTGCCGGTCGAGCAGAACATCCGCGCCAGACTGACTCG
CCGCAACAACTCCCTGCTTCTTCACACGGCCCTCTTCACCACCCTCCTAG
TAGTCCAGGGTCACGTCTCAATGCCCTTCACTCATCACAGCCACTCCGGG
CAATTCTGCCCCGGCCACGCCAAAGACAACTTGGAAGAAATCATCCAGCT
CGCCATATCCAAGAAATTCCACACCTTCTGCCTAACAGAGCACATGCCCC
GCCATGAAGAAGATTTCTACCCAGAAGAGATCGAAGCCGGCGACACCGAA
TCCAGCCACGTAGCCAACGAGGCCGCCTACTTCGCCGAAGCCACGCGCCT
CCGAACCAAATACGCCGATCAAATCAACATCCTCATCGGATTCGAGATCG
ACTGGATCCGGCCGGCCTCGCGACAGCTAATCGAGGAGTCTCTGTCGCGG
CACCCGTTCGAGTTCTTCATGGGTTCCGTGCACCATACATTGACCGTCCC
CATAGACTATGACCGGCCGCTGTATGAGAAGGCGCGCGCACTAGCCGGTG
GAACGGACGAGTTGCTCTTCGAGGCGTACTTTGATGAGCAGCTGGATATG
CTGAAGCAGGTGAAGCCGGTGGTGGTGGGGCATTTTGATCTGATTCGGCT
GAAGAGCGATGACCCCGATCGGAGTTTTCAGGACTATCCGAGGGTGTGGG
AGAAGATTCTACGAAATTTGGACTACGTGGCGGGATATGGGGGTCTGTTG
GAGGTTAATTCGGCGGCGTTGAGGAAGGGCATGAAGGAGCCGTATCCGAA
TGGGGAGATTTGTAAGGAATTCCTGGCTCGCGGAGGTCGGTTCTGTCTGT
CGGATGATAGTCATGGATTGGCGCAGGTTGGGCTGAATTTCCATCGCGTG
GTGCCGTTCTTGGAGCAGGTGGGTGTGTCGAGGCTGCATTATTTGGCACT
GGGGGAGGGTGATGCGCCCGTTGATGCACGGTTTCCTCGGACGCAGATCA
AGGAGGTGACATTGGAGGAGGTGAAGAATATGTCGTTTTGGAGGTAGATG
CTGGCGGAGCTGCCGGTCGAGCAGAACATCCGCGCCAGACTGACTCGCCG
CAACAACTCCCTGCTTCTTCACACGGCCCTCTTCACCACCCTCCTAGTAG
TCCAGGGTCACGTCTCAATGCCCTTCACTCATCACAGCCACTCCGGGCAA
TTCTGCCCCGGCCACGCCAAAGACAACTTGGAAGAAATCATCCAGCTCGC
CATATCCAAGAAATTCCACACCTTCTGCCTAACAGAGCACATGCCCCGCC
ATGAAGAAGATTTCTACCCAGAAGAGATCGAAGCCGGCGACACCGAATCC
AGCCACGTAGCCAACGAGGCCGCCTACTTCGCCGAAGCCACGCGCCTCCG
AACCAAATACGCCGATCAAATCAACATCCTCATCGGATTCGAGATCGACT
GGATCCGGCCGGCCTCGCGACAGCTAATCGAGGAGTCTCTGTCGCGGCAC
CCGTTCGAGTTCTTCATGGGTTCCGTGCACCATACATTGACCGTCCCCAT
AGACTATGACCGGCCGCTGTATGAGAAGGCGCGCGCACTAGCCGGTGGAA
CGGACGAGTTGCTCTTCGAGGCGTACTTTGATGAGCAGCTGGATATGCTG
AAGCAGGTGAAGCCGGTGGTGGTGGGGCATTTTGATCTGATTCGGCTGAA
GAGCGATGACCCCGATCGGAGTTTTCAGGACTATCCGAGGGTGTGGGAGA
AGATTCTACGAAATTTGGACTACGTGGCGGGATATGGGGGTCTGTTGGAG
GTTAATTCGGCGGCGTTGAGGAAGGGCATGAAGGAGCCGTATCCGAATGG
GGAGATTTGTAAGGAATTCCTGGCTCGCGGAGGTCGGTTCTGTCTGTCGG
ATGATAGTCATGGATTGGCGCAGGTTGGGCTGAATTTCCATCGCGTGGTG
CCGTTCTTGGAGCAGGTGGGTGTGTCGAGGCTGCATTATTTGGCACTGGG
GGAGGGTGATGCGCCCGTTGATGCACGGTTTCCTCGGACGCAGATCAAGG
AGGTGACATTGGAGGAGGTGAAGAATATGTCGTTTTGGAGGTAGATGCTG
GCGGAGCTGCCGGTCGAGCAGAACATCCGCGCCAGACTGACTCGCCGCAA
CAACTCCCTGCTTCTTCACACGGCCCTCTTCACCACCCTCCTAGTAGTCC
AGGGTCACGTCTCAATGCCCTTCACTCATCACAGCCACTCCGGGCAATTC
TGCCCCGGCCACGCCAAAGACAACTTGGAAGAAATCATCCAGCTCGCCAT
ATCCAAGAAATTCCACACCTTCTGCCTAACAGAGCACATGCCCCGCCATG
AAGAAGATTTCTACCCAGAAGAGATCGAAGCCGGCGACACCGAATCCAGC
CACGTAGCCAACGAGGCCGCCTACTTCGCCGAAGCCACGCGCCTCCGAAC
CAAATACGCCGATCAAATCAACATCCTCATCGGATTCGAGATCGACTGGA
TCCGGCCGGCCTCGCGACAGCTAATCGAGGAGTCTCTGTCGCGGCACCCG
TTCGAGTTCTTCATGGGTTCCGTGCACCATACATTGACCGTCCCCATAGA
CTATGACCGGCCGCTGTATGAGAAGGCGCGCGCACTAGCCGGTGGAACGG
ACGAGTTGCTCTTCGAGGCGTACTTTGATGAGCAGCTGGATATGCTGAAG
CAGGTGAAGCCGGTGGTGGTGGGGCATTTTGATCTGATTCGGCTGAAGAG
CGATGACCCCGATCGGAGTTTTCAGGACTATCCGAGGGTGTGGGAGAAGA
TTCTACGAAATTTGGACTACGTGGCGGGATATGGGGGTCTGTTGGAGGTT
AATTCGGCGGCGTTGAGGAAGGGCATGAAGGAGCCGTATCCGAATGGGGA
GATTTGTAAGGAATTCCTGGCTCGCGGAGGTCGGTTCTGTCTGTCGGATG
ATAGTCATGGATTGGCGCAGGTTGGGCTGAATTTCCATCGCGTGGTGCCG
TTCTTGGAGCAGGTGGGTGTGTCGAGGCTGCATTATTTGGCACTGGGGGA
GGGTGATGCGCCCGTTGATGCACGGTTTCCTCGGACGCAGATCAAGGAGG
TGACATTGGAGGAGGTGAAGAATATGTCGTTTTGGAGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004401histidinol-phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0000105histidine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19180CAN33_19180Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19180-T1.exon1CAN33_19180-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_19180-T1.exon2CAN33_19180-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19180-T1.exon3CAN33_19180-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19180-T1.cdsCAN33_19180-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19180-T1CAN33_19180-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263UCR
DBxrefInterPro:IPR016195
DBxrefInterPro:IPR004013
DBxrefInterPro:IPR010140
DBxrefPFAM:PF02811
Producthistidinol phosphate phosphatase HisJ family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1940281..1941592 +
Powered by Drupal