CAN33_19590-T1, CAN33_19590-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_19590-T1
Unique Name	CAN33_19590-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2176877..2178098-
coding sequence from alignment at NKJJ01000011.1:2176877..2178098-

mRNA from alignment at NKJJ01000011.1:2176877..2178098-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_19590-T1 ID=CAN33_19590-T1|Name=CAN33_19590-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1222bp|location=Sequence derived from alignment at NKJJ01000011.1:2176877..2178098- (Aspergillus niger FDAARGOS_311)
ATGCAGCCTGTTGCTCACCAGTCGGGAGGCGCGTCTGGAGATCCGCTCCC
GCCGTCCTTGCCGACGGAGGCAATCGAAGAGAAGGCCAGCGTGTCTAGCT
TGGGATCATGGAATCATTTGGTTGCTGGCGCGTGAGTTGATTCAATGCTA
TCATTGAGAAGCTGAATACTGACGTTTTATTATAGTACCGGCGGCATGGT
CACTGCTATCGTTACGAGTCCTCTTGATGTTCTCCGCACGCGGTAGGATA
AGCCTTCAACTCAAGCAACAACCCAGCTTTGCATGCTAACGTATCTTGTG
CTTCCTAGGTTGCAAACCGATTACTATCAGACACAGGGCGTGAACCGCTC
AATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTATCC
GCCATTTTCGCGAGACGTTCGGCATTCTCTTCTCTATCCATCGTGTTGAA
GGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGTGTCGT
CCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCTGC
TGCCGGAGATCTTGGGTTGCGACAAGGATACTACTCTGGTACATGCCATG
TCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCTATTTG
GGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTACA
AGAACAGTCTTGATTGTACCAAGCAGATTCTGCAACAAGAGGGTCCCAAG
GGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAAACAAC
ACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGAGG
TCAATTTGGATAAGAACTCGGATTCGAACAAGTTTGTTCAGGGCCTTGCT
CTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATCGCGTA
TCCCCATGAGGTGAGTTGACGCGTCGCGAATCCCAGCATATGCATCTTCT
GACATTTTGCAGGTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGA
CGGTCGCCAGAAGTATACTAGTATCCTCCAGTGTGCGCGGTTGATCTTGA
AGGAAGAGGGAGTGATCGCGCTGTATGGAGGATTGACGGCACACCTTCTC
CGCACGGTGCCGTCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCT
CAAGGTCCTTGAGGGACGTTAA

Coding sequence (CDS) from alignment at NKJJ01000011.1:2176877..2178098-

>CAN33_19590-T1 ID=CAN33_19590-T1|Name=CAN33_19590-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4200bp|location=Sequence derived from alignment at NKJJ01000011.1:2176877..2178098- (Aspergillus niger FDAARGOS_311)
GTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAA
GTATACTAGTATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAG
TGATCGCGCTGTATGGAGGATTGACGGCACACCTTCTCCGCACGGTGCCG
TCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGA
GGGACGTTAAGTTGCAAACCGATTACTATCAGACACAGGGCGTGAACCGC
TCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTAT
CCGCCATTTTCGCGAGACGTTCGGCATTCTCTTCTCTATCCATCGTGTTG
AAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGTGTC
GTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCT
GCTGCCGGAGATCTTGGGTTGCGACAAGGATACTACTCTGGTACATGCCA
TGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCTATT
TGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTA
CAAGAACAGTCTTGATTGTACCAAGCAGATTCTGCAACAAGAGGGTCCCA
AGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAAACA
ACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGA
GGTCAATTTGGATAAGAACTCGGATTCGAACAAGTTTGTTCAGGGCCTTG
CTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATCGCG
TATCCCCATGAGTACCGGCGGCATGGTCACTGCTATCGTTACGAGTCCTC
TTGATGTTCTCCGCACGCGATGCAGCCTGTTGCTCACCAGTCGGGAGGCG
CGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATCGAAGAG
AAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGC
GTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAA
GTATACTAGTATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAG
TGATCGCGCTGTATGGAGGATTGACGGCACACCTTCTCCGCACGGTGCCG
TCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGA
GGGACGTTAAGTTGCAAACCGATTACTATCAGACACAGGGCGTGAACCGC
TCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTAT
CCGCCATTTTCGCGAGACGTTCGGCATTCTCTTCTCTATCCATCGTGTTG
AAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGTGTC
GTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCT
GCTGCCGGAGATCTTGGGTTGCGACAAGGATACTACTCTGGTACATGCCA
TGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCTATT
TGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTA
CAAGAACAGTCTTGATTGTACCAAGCAGATTCTGCAACAAGAGGGTCCCA
AGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAAACA
ACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGA
GGTCAATTTGGATAAGAACTCGGATTCGAACAAGTTTGTTCAGGGCCTTG
CTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATCGCG
TATCCCCATGAGTACCGGCGGCATGGTCACTGCTATCGTTACGAGTCCTC
TTGATGTTCTCCGCACGCGATGCAGCCTGTTGCTCACCAGTCGGGAGGCG
CGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATCGAAGAG
AAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGC
GTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAA
GTATACTAGTATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAG
TGATCGCGCTGTATGGAGGATTGACGGCACACCTTCTCCGCACGGTGCCG
TCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGA
GGGACGTTAAGTTGCAAACCGATTACTATCAGACACAGGGCGTGAACCGC
TCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTAT
CCGCCATTTTCGCGAGACGTTCGGCATTCTCTTCTCTATCCATCGTGTTG
AAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGTGTC
GTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCT
GCTGCCGGAGATCTTGGGTTGCGACAAGGATACTACTCTGGTACATGCCA
TGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCTATT
TGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTA
CAAGAACAGTCTTGATTGTACCAAGCAGATTCTGCAACAAGAGGGTCCCA
AGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAAACA
ACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGA
GGTCAATTTGGATAAGAACTCGGATTCGAACAAGTTTGTTCAGGGCCTTG
CTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATCGCG
TATCCCCATGAGTACCGGCGGCATGGTCACTGCTATCGTTACGAGTCCTC
TTGATGTTCTCCGCACGCGATGCAGCCTGTTGCTCACCAGTCGGGAGGCG
CGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATCGAAGAG
AAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGC
GTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAA
GTATACTAGTATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAG
TGATCGCGCTGTATGGAGGATTGACGGCACACCTTCTCCGCACGGTGCCG
TCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGA
GGGACGTTAAGTTGCAAACCGATTACTATCAGACACAGGGCGTGAACCGC
TCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTAT
CCGCCATTTTCGCGAGACGTTCGGCATTCTCTTCTCTATCCATCGTGTTG
AAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGTGTC
GTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCT
GCTGCCGGAGATCTTGGGTTGCGACAAGGATACTACTCTGGTACATGCCA
TGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCTATT
TGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTA
CAAGAACAGTCTTGATTGTACCAAGCAGATTCTGCAACAAGAGGGTCCCA
AGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAAACA
ACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGA
GGTCAATTTGGATAAGAACTCGGATTCGAACAAGTTTGTTCAGGGCCTTG
CTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATCGCG
TATCCCCATGAGTACCGGCGGCATGGTCACTGCTATCGTTACGAGTCCTC
TTGATGTTCTCCGCACGCGATGCAGCCTGTTGCTCACCAGTCGGGAGGCG
CGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATCGAAGAG
AAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_19590	CAN33_19590	Aspergillus niger FDAARGOS_311	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_19590-T1	CAN33_19590-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_19590-T1.cds	CAN33_19590-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_19590-T1.exon4	CAN33_19590-T1.exon4	Aspergillus niger FDAARGOS_311	exon
CAN33_19590-T1.exon3	CAN33_19590-T1.exon3	Aspergillus niger FDAARGOS_311	exon
CAN33_19590-T1.exon2	CAN33_19590-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_19590-T1.exon1	CAN33_19590-T1.exon1	Aspergillus niger FDAARGOS_311	exon

Properties


Property Name	Value
Note	antiSMASH:Cluster_10000111.12
Note	antiSMASH:Cluster_10000111.11
Note	BUSCO:EOG09263HED
DBxref	InterPro:IPR018108
DBxref	InterPro:IPR023395
DBxref	PFAM:PF00153
Product	Mitochondrial carrier protein family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000011.1	supercontig	NKJJ01000011.1:2176877..2178098 -

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CAN33_19590-T1, CAN33_19590-T1 (mRNA) Aspergillus niger FDAARGOS_311