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CAN33_1985-T1, CAN33_1985-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1985-T1
Unique NameCAN33_1985-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1208952..1210109-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1985-T1 ID=CAN33_1985-T1|Name=CAN33_1985-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1158bp|location=Sequence derived from alignment at NKJJ01000004.1:1208952..1210109- (Aspergillus niger FDAARGOS_311)
ATGGCCTCAATGGGTGCTGTCCCCCAGTATGGGCAGCTGATCCGGTCCAG
TAAGTACCTGCAAGACGAATAACCCTGTTTTCTCCCCAATTGTGCCCCCT
CTCATTCTCACCTCTCCCCTGCAGTCTCTTCAGCCCGGACCGGCCTGACC
TACGTCCCTCGCCGCACTCTGGCCTACACTGTCCCTCGTCAAGCCTCCGA
AGACGGTCCCAACGGTCCTAATGACAAGTCCGAGTCCGAATCCAAGCCCT
CCACTTTGTCCTCGATCAAGAACTTCTTCTTCGGCGGCAAGCCCGGCGCC
GCCAAGCCCAAAGCTCGCCGCACCACCGCTCCCGCCAAACGCGAGGGTTC
CCTGAGCGCCGACTCCATCTTCGCAGAGGATGAAGCCAGCCCCAAGCTGG
TGGCGTCCGGCCGTACCCCCGCCGCTCGCAAGCAAGCCGGCGCCCCCGAG
GAGGGCCAGGAAGAGGTCGACTATGCTGTTGACCGACGAAACCGGGAGAC
GATGCAGACAGTGCTGGACCCGAACCCCAAGGCGCGGACTCGCTGGGAAC
AAAAGATGGTTGCTCGCGAGATCCGTCGTCGAGGCCGCATCTCGCCCACC
GAGCTGATCATGCGGACGGAGCGCGAGTCCCTCTCCAAGTCCCATTGGTT
CAAGACCTCCGTCAAGAAGCTGGGTCCCCTTGCTCGCCAGATTGCCGGCA
AGAACATCGACGATGCCATGCTGCAGATGCGCCTGAGCAAGAAGAAGGCC
GCCAAAGAGGTCCTCCAGCACCTCGAGCATGCTAAGAACGTCGCCGTGGT
GCGTTCTGGTATGGGCCTGGGTGCCGTCGAGGGCAAGACCGCCAACCAGA
AGCCTGTCACCATCACCCTCAAGAACGGAGAGCGCAAGACCATCAACGAC
CCTACTTCCATCTACATCGACCAAGCGTGGGTTAACCGTGGCCCGTACGG
TTACGACTACGACCACCGCGCGCGCGGCAACATCAACCTCATGCGTCCGC
CGTACACCTCTCTGTCGGTGGTGCTGAAGGAAGAGCAGACACGTATCCGT
CAATGGCAGAACCGGGAGTCCGAGGAGCTGCGTAAGCGCAAGGCTAAGCT
CTGGACGCCGCTGCCGGACCGTAAGATTACGGCGCAGAACCAGTTCTACA
GCTGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1208952..1210109-

>CAN33_1985-T1 ID=CAN33_1985-T1|Name=CAN33_1985-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2166bp|location=Sequence derived from alignment at NKJJ01000004.1:1208952..1210109- (Aspergillus niger FDAARGOS_311)
TCTCTTCAGCCCGGACCGGCCTGACCTACGTCCCTCGCCGCACTCTGGCC
TACACTGTCCCTCGTCAAGCCTCCGAAGACGGTCCCAACGGTCCTAATGA
CAAGTCCGAGTCCGAATCCAAGCCCTCCACTTTGTCCTCGATCAAGAACT
TCTTCTTCGGCGGCAAGCCCGGCGCCGCCAAGCCCAAAGCTCGCCGCACC
ACCGCTCCCGCCAAACGCGAGGGTTCCCTGAGCGCCGACTCCATCTTCGC
AGAGGATGAAGCCAGCCCCAAGCTGGTGGCGTCCGGCCGTACCCCCGCCG
CTCGCAAGCAAGCCGGCGCCCCCGAGGAGGGCCAGGAAGAGGTCGACTAT
GCTGTTGACCGACGAAACCGGGAGACGATGCAGACAGTGCTGGACCCGAA
CCCCAAGGCGCGGACTCGCTGGGAACAAAAGATGGTTGCTCGCGAGATCC
GTCGTCGAGGCCGCATCTCGCCCACCGAGCTGATCATGCGGACGGAGCGC
GAGTCCCTCTCCAAGTCCCATTGGTTCAAGACCTCCGTCAAGAAGCTGGG
TCCCCTTGCTCGCCAGATTGCCGGCAAGAACATCGACGATGCCATGCTGC
AGATGCGCCTGAGCAAGAAGAAGGCCGCCAAAGAGGTCCTCCAGCACCTC
GAGCATGCTAAGAACGTCGCCGTGGTGCGTTCTGGTATGGGCCTGGGTGC
CGTCGAGGGCAAGACCGCCAACCAGAAGCCTGTCACCATCACCCTCAAGA
ACGGAGAGCGCAAGACCATCAACGACCCTACTTCCATCTACATCGACCAA
GCGTGGGTTAACCGTGGCCCGTACGGTTACGACTACGACCACCGCGCGCG
CGGCAACATCAACCTCATGCGTCCGCCGTACACCTCTCTGTCGGTGGTGC
TGAAGGAAGAGCAGACACGTATCCGTCAATGGCAGAACCGGGAGTCCGAG
GAGCTGCGTAAGCGCAAGGCTAAGCTCTGGACGCCGCTGCCGGACCGTAA
GATTACGGCGCAGAACCAGTTCTACAGCTGGTGAATGGCCTCAATGGGTG
CTGTCCCCCAGTATGGGCAGCTGATCCGGTCCATCTCTTCAGCCCGGACC
GGCCTGACCTACGTCCCTCGCCGCACTCTGGCCTACACTGTCCCTCGTCA
AGCCTCCGAAGACGGTCCCAACGGTCCTAATGACAAGTCCGAGTCCGAAT
CCAAGCCCTCCACTTTGTCCTCGATCAAGAACTTCTTCTTCGGCGGCAAG
CCCGGCGCCGCCAAGCCCAAAGCTCGCCGCACCACCGCTCCCGCCAAACG
CGAGGGTTCCCTGAGCGCCGACTCCATCTTCGCAGAGGATGAAGCCAGCC
CCAAGCTGGTGGCGTCCGGCCGTACCCCCGCCGCTCGCAAGCAAGCCGGC
GCCCCCGAGGAGGGCCAGGAAGAGGTCGACTATGCTGTTGACCGACGAAA
CCGGGAGACGATGCAGACAGTGCTGGACCCGAACCCCAAGGCGCGGACTC
GCTGGGAACAAAAGATGGTTGCTCGCGAGATCCGTCGTCGAGGCCGCATC
TCGCCCACCGAGCTGATCATGCGGACGGAGCGCGAGTCCCTCTCCAAGTC
CCATTGGTTCAAGACCTCCGTCAAGAAGCTGGGTCCCCTTGCTCGCCAGA
TTGCCGGCAAGAACATCGACGATGCCATGCTGCAGATGCGCCTGAGCAAG
AAGAAGGCCGCCAAAGAGGTCCTCCAGCACCTCGAGCATGCTAAGAACGT
CGCCGTGGTGCGTTCTGGTATGGGCCTGGGTGCCGTCGAGGGCAAGACCG
CCAACCAGAAGCCTGTCACCATCACCCTCAAGAACGGAGAGCGCAAGACC
ATCAACGACCCTACTTCCATCTACATCGACCAAGCGTGGGTTAACCGTGG
CCCGTACGGTTACGACTACGACCACCGCGCGCGCGGCAACATCAACCTCA
TGCGTCCGCCGTACACCTCTCTGTCGGTGGTGCTGAAGGAAGAGCAGACA
CGTATCCGTCAATGGCAGAACCGGGAGTCCGAGGAGCTGCGTAAGCGCAA
GGCTAAGCTCTGGACGCCGCTGCCGGACCGTAAGATTACGGCGCAGAACC
AGTTCTACAGCTGGTGAATGGCCTCAATGGGTGCTGTCCCCCAGTATGGG
CAGCTGATCCGGTCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1985CAN33_1985Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1985-T1CAN33_1985-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1985-T1.cdsCAN33_1985-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1985-T1.exon2CAN33_1985-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1985-T1.exon1CAN33_1985-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264LC7
DBxrefInterPro:IPR036394
DBxrefInterPro:IPR001063
DBxrefPFAM:PF00237
ProductRibosomal protein L22p/L17e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1208952..1210109 -
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