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CAN33_19940-T1, CAN33_19940-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19940-T1
Unique NameCAN33_19940-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2399192..2400027-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19940-T1 ID=CAN33_19940-T1|Name=CAN33_19940-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=836bp|location=Sequence derived from alignment at NKJJ01000011.1:2399192..2400027- (Aspergillus niger FDAARGOS_311)
ATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATGGGCCA
GACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAGTGA
ACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTATAT
GTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGACCTG
GAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTACAT
TTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTGGAA
TGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCTTTT
CACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGAACTGA
TGATTTGGTATGTGAGCTCTCAAAGGATCAAAGAATACAGAAATCTAACA
ACGCCAGGCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATT
GCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCAC
CACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGAAAGCC
CTATCAACTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTCACT
CAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAGTAAGATTCC
CTGATTCTACCAGCGGACGCCGCAGCGAAACAGTCACTAACAGAAGTGAT
GTGTAGATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACC
TTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2399192..2400027-

>CAN33_19940-T1 ID=CAN33_19940-T1|Name=CAN33_19940-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2160bp|location=Sequence derived from alignment at NKJJ01000011.1:2399192..2400027- (Aspergillus niger FDAARGOS_311)
ATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACG
GTTGACAACTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACA
TCCAGCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCC
TGGGAGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGAC
ATACAGCTTCGTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCA
ATGCATTTTTCAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCT
CAGTACTTGATCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCA
CCGCCATGGGCCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCC
CCGTATTCAGTGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAG
CCAGTGTGTATATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACA
CCGAATGGACCTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAAC
TCTGGCGTTACATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCC
CACCTCGGTGGAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCG
CGTATGATCTTTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGC
GACTATGAACTGATGATTTGATCTGCAGTTTGGAACTGAGGCGTTCACCG
GGGGCCCGGCAACCTTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
GCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATTGCCACGG
CCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCACCACCCAG
GCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGAAAGCCCTATCAA
CTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTCACTCAGAACC
AAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAATGAAGCTCCCCGTGTC
ACTTGCTATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCAAT
ATGACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTCTGGGGC
GAGTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCCAG
CAGTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGGAA
CAGTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCGTG
AGTGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAACAC
CAACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGTGG
ACCATGCCACTTCTAGCGGCGACTATGAACTGATGATTTGATCTGCAGTT
TGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTGACAACT
GGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACATCCAGCCCAT
TGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGT
GGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTC
GTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCAATGCATTTTT
CAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGA
TCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATGGG
CCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAG
TGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTA
TATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGAC
CTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTA
CATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTG
GAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCT
TTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGAAC
TGATGATTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008810cellulase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19940CAN33_19940Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19940-T1CAN33_19940-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19940-T1.cdsCAN33_19940-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19940-T1.exon3CAN33_19940-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_19940-T1.exon2CAN33_19940-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19940-T1.exon1CAN33_19940-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR002594
DBxrefInterPro:IPR013319
DBxrefPFAM:PF01670
ProductGlycosyl hydrolase family 12 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2399192..2400027 -
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