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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2453059..2454816+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20060-T1 ID=CAN33_20060-T1|Name=CAN33_20060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1758bp|location=Sequence derived from alignment at NKJJ01000011.1:2453059..2454816+ (Aspergillus niger FDAARGOS_311)
ATGGATTCGCACAATGCCCCCGCCTCCTCGGCGGGCCGGGGCACGGATTT
TGATCCTCGCACTCCTGGAGCTCACGAAGGAACCCCGGTTTCAGATCAAG
GCCACAATACCTCCATGGATGGTGCAACTGTAGGCGGCACGGACCGAGTA
TATCCTATTCGGTCAATCATTTCCTTCAACCCCGCTGCTACGGATCCCAA
TCAGCAAGGTATACCGAATGAAATCCGTTCGCCGCGAAGTGGTGCTCGCT
CTTATTCAATCATCGACGCCGATACCTGGGACCAATTGAGTTCGCAGCCC
ACTAGTTCGCCGCATACCAACCCTTCTCCTAATGCGCCTGTTCATACGCC
CGAGTCGACCGATCGGCTCTCGCAGCAGCAATCTCCTAACGTCTTCTCAC
CGGCCTCGAGCGCTGCCGAGCGAGACGCTCCGCCGGACGAAAGCTCCACG
TACAGGAAGGTGGCACCGGAAGAGGGCCATGCGAGCCTTGTTACTTCGCG
ATTCCAGCACGTGGTTACGGCGGCGGGTCATGCTGTCATCACAGGCAATA
CACCTGATTCCTTTCGGGCCTGTGAAGACGAACCAATCCACATCCCGGGC
GCCGTGCAAACCTTTGGCGTCATGCTTGTTTTGCGCGAGACACCCGAGGG
TTCTTTAGCGGTCCATGTAGCGAGTGAGAACTCAGAAGCTATTCTGGGTC
ACTCGCCAAGCAACCTTTTTGCGCTGGAGAGTTTCACTGACCTCCTGCAA
GATGATCAGACCGACATCCTCCTCGATCACATTGACTTCATTCGAGACGA
TGGATATGATCCCGTTAGTGATGGCCCGGAGGTTTTCATTCTGGCTGTCA
AAGACCGATTCGGGCGGCCTCGGCGCTTTTGGTGTGCCATTCATGTTAAT
ACCGCTCACCGGGATGTGATCATTTGTGAGTTCGAATTGGAAGACGACCG
CATCAATCCTCTCAATGTTGCTGGACGCACGACACCTACATCCCCGACAG
TGACTCTGGGCTTTGAGCCAACCCCAGATCAATTAGCAAGCAGCACTGTG
AACATTAGCCAGCCGTTACGAGTGCTTCGGAACGCACGCAGAAGGAGGGG
TGAAGCAGCTGCCATGGAGGTGTTCAGTATTGTTAGTCAGATCCAGGATC
AGCTTGGTGATGCCCAAAATATGGACGCCTTGCTCAACATCACGATTGGC
ATAGTTAAAGAATTGACTGGATTTCACCGCGTGATGATATATCAGTTTGA
TAGTGAGGCCAACGGAGATGTGGTGGCAGAATTAGTCGACACAAGAATGA
CCAAGGACTTGTATAAGGGATTACATTTCCCGTCAACGGATATCCCAAAG
CAAGCCCGCGACTTGTATCGTCTCAACAAAGTGCGCATACTCTACGACCG
TGACCAGATGAGCTCACGGTTGGTGTGTCGAGGCATCGAGGATCTCAAGA
CACCTCTGGACATGACACATGCCTACTTGCGTGCAATGTCGCCTATCCAC
ATCAAGTACTTGGCGAACATGGGGGTCCGTGCGTCCATGTCGATCAGTAT
CAACAACACGCATGATCTTTGGGGTCTGATCTCCTGTCACTCTTATGGAG
ACACCGGCATGAGGGTACCTTTCCCAATTCGGAAAATGTGTCGGTTGATC
GGCGATACACTCTCACGGAACATTGAGCGTCTCTCTTACGCATCACGTCT
TCAGGCTCGCAAGCTTCTCAACACTATTCCTACGGATGCCAACCCTCGGG
TTATATAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2453059..2454816+ >CAN33_20060-T1 ID=CAN33_20060-T1|Name=CAN33_20060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1758bp|location=Sequence derived from alignment at NKJJ01000011.1:2453059..2454816+ (Aspergillus niger FDAARGOS_311)
ATGGATTCGCACAATGCCCCCGCCTCCTCGGCGGGCCGGGGCACGGATTT
TGATCCTCGCACTCCTGGAGCTCACGAAGGAACCCCGGTTTCAGATCAAG
GCCACAATACCTCCATGGATGGTGCAACTGTAGGCGGCACGGACCGAGTA
TATCCTATTCGGTCAATCATTTCCTTCAACCCCGCTGCTACGGATCCCAA
TCAGCAAGGTATACCGAATGAAATCCGTTCGCCGCGAAGTGGTGCTCGCT
CTTATTCAATCATCGACGCCGATACCTGGGACCAATTGAGTTCGCAGCCC
ACTAGTTCGCCGCATACCAACCCTTCTCCTAATGCGCCTGTTCATACGCC
CGAGTCGACCGATCGGCTCTCGCAGCAGCAATCTCCTAACGTCTTCTCAC
CGGCCTCGAGCGCTGCCGAGCGAGACGCTCCGCCGGACGAAAGCTCCACG
TACAGGAAGGTGGCACCGGAAGAGGGCCATGCGAGCCTTGTTACTTCGCG
ATTCCAGCACGTGGTTACGGCGGCGGGTCATGCTGTCATCACAGGCAATA
CACCTGATTCCTTTCGGGCCTGTGAAGACGAACCAATCCACATCCCGGGC
GCCGTGCAAACCTTTGGCGTCATGCTTGTTTTGCGCGAGACACCCGAGGG
TTCTTTAGCGGTCCATGTAGCGAGTGAGAACTCAGAAGCTATTCTGGGTC
ACTCGCCAAGCAACCTTTTTGCGCTGGAGAGTTTCACTGACCTCCTGCAA
GATGATCAGACCGACATCCTCCTCGATCACATTGACTTCATTCGAGACGA
TGGATATGATCCCGTTAGTGATGGCCCGGAGGTTTTCATTCTGGCTGTCA
AAGACCGATTCGGGCGGCCTCGGCGCTTTTGGTGTGCCATTCATGTTAAT
ACCGCTCACCGGGATGTGATCATTTGTGAGTTCGAATTGGAAGACGACCG
CATCAATCCTCTCAATGTTGCTGGACGCACGACACCTACATCCCCGACAG
TGACTCTGGGCTTTGAGCCAACCCCAGATCAATTAGCAAGCAGCACTGTG
AACATTAGCCAGCCGTTACGAGTGCTTCGGAACGCACGCAGAAGGAGGGG
TGAAGCAGCTGCCATGGAGGTGTTCAGTATTGTTAGTCAGATCCAGGATC
AGCTTGGTGATGCCCAAAATATGGACGCCTTGCTCAACATCACGATTGGC
ATAGTTAAAGAATTGACTGGATTTCACCGCGTGATGATATATCAGTTTGA
TAGTGAGGCCAACGGAGATGTGGTGGCAGAATTAGTCGACACAAGAATGA
CCAAGGACTTGTATAAGGGATTACATTTCCCGTCAACGGATATCCCAAAG
CAAGCCCGCGACTTGTATCGTCTCAACAAAGTGCGCATACTCTACGACCG
TGACCAGATGAGCTCACGGTTGGTGTGTCGAGGCATCGAGGATCTCAAGA
CACCTCTGGACATGACACATGCCTACTTGCGTGCAATGTCGCCTATCCAC
ATCAAGTACTTGGCGAACATGGGGGTCCGTGCGTCCATGTCGATCAGTAT
CAACAACACGCATGATCTTTGGGGTCTGATCTCCTGTCACTCTTATGGAG
ACACCGGCATGAGGGTACCTTTCCCAATTCGGAAAATGTGTCGGTTGATC
GGCGATACACTCTCACGGAACATTGAGCGTCTCTCTTACGCATCACGTCT
TCAGGCTCGCAAGCTTCTCAACACTATTCCTACGGATGCCAACCCTCGGG
TTATATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018298 | protein-chromophore linkage |
| GO:0009584 | detection of visible light |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR035965 |
| DBxref | InterPro:IPR016132 |
| DBxref | InterPro:IPR013654 |
| DBxref | InterPro:IPR029016 |
| DBxref | InterPro:IPR003018 |
| DBxref | InterPro:IPR001294 |
| DBxref | PFAM:PF08446 |
| DBxref | PFAM:PF01590 |
| Product | GAF domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2453059..2454816 + |
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