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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2583229..2584281- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20280-T1 ID=CAN33_20280-T1|Name=CAN33_20280-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1053bp|location=Sequence derived from alignment at NKJJ01000011.1:2583229..2584281- (Aspergillus niger FDAARGOS_311)
ATGGCCTCCATCTCGGAAATCCGGGCCTCCAACTCCCGGATCACCTCAGA
GACGGTGCCTCGCACAGCAGTCTTCACTGGAGCCACAGATGGCATTGGAA
AGGCAACACTCACTCGCCTGATCTCTACAAACCTACCAGTCCGGGTGTAT
GTCATTGGTCGGAACGGCAAAAGGCATCAAGCTTTTTTAGATGAGCTTCG
GCTGTCCAACAGACAGGCACAGATAACCTGGCTGGAAGGTCAACTGTCTC
TTCTCGCGGATACCAAGAAACTATGCGATGAAATCAAGAGACGCGAGACG
AGTCTTGACTGCTTGTACCTAAGCGCTGGCTTCATCTCCTCTGGAGAGCG
CATTGGTACGTATATTCTAGTTACCATTGACCACAGAGTATCAGCTCACA
AATGACGACGATTAGAAACATCAGAGGGCAAAAGCCTCTCACTATCACTC
AACTACTACAGCCGAATCTTGATGATGACCCTGCTTCTCCCCTTACTCAA
CTCATCGCCCAATAGCCCACGCATCGTGAGCATCCTCAACGCGGGGTATG
AATCATCTTCCATCTACCTCGACGACCTCGATCTCGAGAAACCGGGCCAC
TTCAGTCTGCTCTCTCTTACCAAATCGATGTCCACCTACACTACGTTGTC
CATGTCGACATTGGCTCAAGAAAATCCTCATGTGGTATTTGTTCATCATT
ACCCTGGCGGCGTCACCACAGATGCCTTTAAGAAGGCCTGGGGTGGGAAG
TGGTATTTCCCACTGTTCAGAGCTGCATTGTCTGCGTTTGGAACATCTCC
TGAAGATGCTGCGGAGAAGGTCTTGTATTTGATCACTAGTGCTCGATATG
GTGGCAGGGGAGTTGCCCTGGGAGAGGGACAGAAGGCCGGTATGACTATG
GCAAAATCCGTTAAGGGAGGTGAGCTGTTTGCTATTGACAATAAGATGAA
AGAGCTGTTTCAGGGGAAGGTGATGTTGGAGTTGCAGGCCATGAATGCGG
GTGAGATTGTTTGGCGCAAAACGGTAGAGACACTCGCGCCGTATTCTTCG
TGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2583229..2584281- >CAN33_20280-T1 ID=CAN33_20280-T1|Name=CAN33_20280-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1986bp|location=Sequence derived from alignment at NKJJ01000011.1:2583229..2584281- (Aspergillus niger FDAARGOS_311)
AAACATCAGAGGGCAAAAGCCTCTCACTATCACTCAACTACTACAGCCGA
ATCTTGATGATGACCCTGCTTCTCCCCTTACTCAACTCATCGCCCAATAG
CCCACGCATCGTGAGCATCCTCAACGCGGGGTATGAATCATCTTCCATCT
ACCTCGACGACCTCGATCTCGAGAAACCGGGCCACTTCAGTCTGCTCTCT
CTTACCAAATCGATGTCCACCTACACTACGTTGTCCATGTCGACATTGGC
TCAAGAAAATCCTCATGTGGTATTTGTTCATCATTACCCTGGCGGCGTCA
CCACAGATGCCTTTAAGAAGGCCTGGGGTGGGAAGTGGTATTTCCCACTG
TTCAGAGCTGCATTGTCTGCGTTTGGAACATCTCCTGAAGATGCTGCGGA
GAAGGTCTTGTATTTGATCACTAGTGCTCGATATGGTGGCAGGGGAGTTG
CCCTGGGAGAGGGACAGAAGGCCGGTATGACTATGGCAAAATCCGTTAAG
GGAGGTGAGCTGTTTGCTATTGACAATAAGATGAAAGAGCTGTTTCAGGG
GAAGGTGATGTTGGAGTTGCAGGCCATGAATGCGGGTGAGATTGTTTGGC
GCAAAACGGTAGAGACACTCGCGCCGTATTCTTCGTGAATGGCCTCCATC
TCGGAAATCCGGGCCTCCAACTCCCGGATCACCTCAGAGACGGTGCCTCG
CACAGCAGTCTTCACTGGAGCCACAGATGGCATTGGAAAGGCAACACTCA
CTCGCCTGATCTCTACAAACCTACCAGTCCGGGTGTATGTCATTGGTCGG
AACGGCAAAAGGCATCAAGCTTTTTTAGATGAGCTTCGGCTGTCCAACAG
ACAGGCACAGATAACCTGGCTGGAAGGTCAACTGTCTCTTCTCGCGGATA
CCAAGAAACTATGCGATGAAATCAAGAGACGCGAGACGAGTCTTGACTGC
TTGTACCTAAGCGCTGGCTTCATCTCCTCTGGAGAGCGCATTGAAACATC
AGAGGGCAAAAGCCTCTCACTATCACTCAACTACTACAGCCGAATCTTGA
TGATGACCCTGCTTCTCCCCTTACTCAACTCATCGCCCAATAGCCCACGC
ATCGTGAGCATCCTCAACGCGGGGTATGAATCATCTTCCATCTACCTCGA
CGACCTCGATCTCGAGAAACCGGGCCACTTCAGTCTGCTCTCTCTTACCA
AATCGATGTCCACCTACACTACGTTGTCCATGTCGACATTGGCTCAAGAA
AATCCTCATGTGGTATTTGTTCATCATTACCCTGGCGGCGTCACCACAGA
TGCCTTTAAGAAGGCCTGGGGTGGGAAGTGGTATTTCCCACTGTTCAGAG
CTGCATTGTCTGCGTTTGGAACATCTCCTGAAGATGCTGCGGAGAAGGTC
TTGTATTTGATCACTAGTGCTCGATATGGTGGCAGGGGAGTTGCCCTGGG
AGAGGGACAGAAGGCCGGTATGACTATGGCAAAATCCGTTAAGGGAGGTG
AGCTGTTTGCTATTGACAATAAGATGAAAGAGCTGTTTCAGGGGAAGGTG
ATGTTGGAGTTGCAGGCCATGAATGCGGGTGAGATTGTTTGGCGCAAAAC
GGTAGAGACACTCGCGCCGTATTCTTCGTGAATGGCCTCCATCTCGGAAA
TCCGGGCCTCCAACTCCCGGATCACCTCAGAGACGGTGCCTCGCACAGCA
GTCTTCACTGGAGCCACAGATGGCATTGGAAAGGCAACACTCACTCGCCT
GATCTCTACAAACCTACCAGTCCGGGTGTATGTCATTGGTCGGAACGGCA
AAAGGCATCAAGCTTTTTTAGATGAGCTTCGGCTGTCCAACAGACAGGCA
CAGATAACCTGGCTGGAAGGTCAACTGTCTCTTCTCGCGGATACCAAGAA
ACTATGCGATGAAATCAAGAGACGCGAGACGAGTCTTGACTGCTTGTACC
TAAGCGCTGGCTTCATCTCCTCTGGAGAGCGCATTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2583229..2584281 - |
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