You are here

Home

CAN33_2035-T1, CAN33_2035-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2035-T1
Unique NameCAN33_2035-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1243345..1244095-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2035-T1 ID=CAN33_2035-T1|Name=CAN33_2035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=751bp|location=Sequence derived from alignment at NKJJ01000004.1:1243345..1244095- (Aspergillus niger FDAARGOS_311)
ATGTCCAGCAGCTCCAACTCGAGCGCCTGCTCGGTAGCCGTACGTCGCTT
CTCACCCTCTGCTTGACGCCTGATGACTAATCAGCATGGCAGATGTTATG
GAACTGGACCACAATCGATGCCTGTATGAATCCATTTTAGTACTATGTAT
AGCTCTTATCCATCTTAGCCCTAACAATTGCAGGTTTCCTCTCCTCCACC
TGGCACATCAACACGGCGGGCCAATTCGCCGTCTCATGCATCGCAGTCGC
CCTCCTCGTCGTTGTGCTCGACTTCCTCCGCCTCCTAAGCAAGCAGTACG
AGGAGCATCTCCAGCGACAATTCCAGCGCTACGTTGCAGCGCAAACAACA
TCGGACCGCATGCAGTTTTTCTGCGGCGACAGCCTGGAGCACGGGCCAAC
GGTGCTTACCTTCCGAGCCAGTCCCCTGCAGCAGCTGGCGCGGGCGCTAC
TGCACACGCTGCAGTTCGGGCTCGCCTACATTATCATGCTGATCGCCATG
TACTACAATGGGTACATGATCATCTCCATCTTCCTAGGCGCGTTTCTGGG
GAAGGTGTTCTGCGACCGGGGCGAGTACCGTGTCGTGGTGGCGCGGCCGG
GGGCCAGGACAACGGATGCGACGAAGGCAATGGAGATGGAGCCCGGGAAA
CAGACAGAAGAGTGGACGACGGGTTGTTGTGGGTAGTTAGGGTATAGTTT
ATAGTGTAACGAAGCCCATCTTGTCTTGAGATTCAGATTGTCTCAGATTA
A
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1243345..1244095-

>CAN33_2035-T1 ID=CAN33_2035-T1|Name=CAN33_2035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2280bp|location=Sequence derived from alignment at NKJJ01000004.1:1243345..1244095- (Aspergillus niger FDAARGOS_311)
ATTAAGTTTCCTCTCCTCCACCTGGCACATCAACACGGCGGGCCAATTCG
CCGTCTCATGCATCGCAGTCGCCCTCCTCGTCGTTGTGCTCGACTTCCTC
CGCCTCCTAAGCAAGCAGTACGAGGAGCATCTCCAGCGACAATTCCAGCG
CTACGTTGCAGCGCAAACAACATCGGACCGCATGCAGTTTTTCTGCGGCG
ACAGCCTGGAGCACGGGCCAACGGTGCTTACCTTCCGAGCCAGTCCCCTG
CAGCAGCTGGCGCGGGCGCTACTGCACACGCTGCAGTTCGGGCTCGCCTA
CATTATCATGCTGATCGCCATGTACTACAATGGGTACATGATCATCTCCA
TCTTCCTAGGCGCGTTTCTGGGGAAGGTGTTCTGCGACCGGGGCGAGTAC
CGTGTCGTGGTGGCGCGGCCGGGGGCCAGGACAACGGATGCGACGAAGGC
AATGGAGATGGAGCCCGGGAAACAGACAGAAGAGTGGACGACGGGTTGTT
ATGTTATGGAACTGGACCACAATCGATGCCTATGTCCAGCAGCTCCAACT
CGAGCGCCTGCTCGGTAGCCATTAAGTTTCCTCTCCTCCACCTGGCACAT
CAACACGGCGGGCCAATTCGCCGTCTCATGCATCGCAGTCGCCCTCCTCG
TCGTTGTGCTCGACTTCCTCCGCCTCCTAAGCAAGCAGTACGAGGAGCAT
CTCCAGCGACAATTCCAGCGCTACGTTGCAGCGCAAACAACATCGGACCG
CATGCAGTTTTTCTGCGGCGACAGCCTGGAGCACGGGCCAACGGTGCTTA
CCTTCCGAGCCAGTCCCCTGCAGCAGCTGGCGCGGGCGCTACTGCACACG
CTGCAGTTCGGGCTCGCCTACATTATCATGCTGATCGCCATGTACTACAA
TGGGTACATGATCATCTCCATCTTCCTAGGCGCGTTTCTGGGGAAGGTGT
TCTGCGACCGGGGCGAGTACCGTGTCGTGGTGGCGCGGCCGGGGGCCAGG
ACAACGGATGCGACGAAGGCAATGGAGATGGAGCCCGGGAAACAGACAGA
AGAGTGGACGACGGGTTGTTATGTTATGGAACTGGACCACAATCGATGCC
TATGTCCAGCAGCTCCAACTCGAGCGCCTGCTCGGTAGCCATTAAGTTTC
CTCTCCTCCACCTGGCACATCAACACGGCGGGCCAATTCGCCGTCTCATG
CATCGCAGTCGCCCTCCTCGTCGTTGTGCTCGACTTCCTCCGCCTCCTAA
GCAAGCAGTACGAGGAGCATCTCCAGCGACAATTCCAGCGCTACGTTGCA
GCGCAAACAACATCGGACCGCATGCAGTTTTTCTGCGGCGACAGCCTGGA
GCACGGGCCAACGGTGCTTACCTTCCGAGCCAGTCCCCTGCAGCAGCTGG
CGCGGGCGCTACTGCACACGCTGCAGTTCGGGCTCGCCTACATTATCATG
CTGATCGCCATGTACTACAATGGGTACATGATCATCTCCATCTTCCTAGG
CGCGTTTCTGGGGAAGGTGTTCTGCGACCGGGGCGAGTACCGTGTCGTGG
TGGCGCGGCCGGGGGCCAGGACAACGGATGCGACGAAGGCAATGGAGATG
GAGCCCGGGAAACAGACAGAAGAGTGGACGACGGGTTGTTATGTTATGGA
ACTGGACCACAATCGATGCCTATGTCCAGCAGCTCCAACTCGAGCGCCTG
CTCGGTAGCCATTAAGTTTCCTCTCCTCCACCTGGCACATCAACACGGCG
GGCCAATTCGCCGTCTCATGCATCGCAGTCGCCCTCCTCGTCGTTGTGCT
CGACTTCCTCCGCCTCCTAAGCAAGCAGTACGAGGAGCATCTCCAGCGAC
AATTCCAGCGCTACGTTGCAGCGCAAACAACATCGGACCGCATGCAGTTT
TTCTGCGGCGACAGCCTGGAGCACGGGCCAACGGTGCTTACCTTCCGAGC
CAGTCCCCTGCAGCAGCTGGCGCGGGCGCTACTGCACACGCTGCAGTTCG
GGCTCGCCTACATTATCATGCTGATCGCCATGTACTACAATGGGTACATG
ATCATCTCCATCTTCCTAGGCGCGTTTCTGGGGAAGGTGTTCTGCGACCG
GGGCGAGTACCGTGTCGTGGTGGCGCGGCCGGGGGCCAGGACAACGGATG
CGACGAAGGCAATGGAGATGGAGCCCGGGAAACAGACAGAAGAGTGGACG
ACGGGTTGTTATGTTATGGAACTGGACCACAATCGATGCCTATGTCCAGC
AGCTCCAACTCGAGCGCCTGCTCGGTAGCC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0035434copper ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2035CAN33_2035Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2035-T1CAN33_2035-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2035-T1.cdsCAN33_2035-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2035-T1.exon4CAN33_2035-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_2035-T1.exon3CAN33_2035-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_2035-T1.exon2CAN33_2035-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2035-T1.exon1CAN33_2035-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR007274
DBxrefPFAM:PF04145
ProductCtr copper transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1243345..1244095 -
Powered by Drupal