You are here

Home

CAN33_20515-T1, CAN33_20515-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20515-T1
Unique NameCAN33_20515-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2729489..2730511+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20515-T1 ID=CAN33_20515-T1|Name=CAN33_20515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1023bp|location=Sequence derived from alignment at NKJJ01000011.1:2729489..2730511+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGCA
ACAACTGCCCTCTTCTCGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGGG
GAGTCGCTGATGCCTCCAAGTCCACTTTCGATAGCCCCTTCGGCAGCTCC
AAGGAGTACTCTTCCACCCTGAAGATCCCCGATTTCAGCAAATACCAGTC
CAAGAAGCCCCCACGCTCCAACCAGGTCTTCTCTTACTTCATGGCCGGTT
CCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGGCCACCGTCCAGGGTAGG
TACCCCTGGAGACATTGAATATTGCGCATATACATGAGAAAAGAGGAGGA
AAAACTAGGAGGGGGGGAATATCAGGTTGAACAATGGGAGGGAATGGCTG
TGTGCTTGACCGCTCGGGACAAATCGCTGATATGGAGTTTCTCTCATTAC
TAGACTTCCTGGTCAACATGTCCGCCTCCGCCGATGTCCTCGCCCAGGCT
AAGGTTGAGATTGGCCTTGGTGCCATCCCTGAGGGCAAGAACGTATGTTC
TATATTCTCTTTTCCCCCGAACCAGAAGGCTGGCTCGTCCCCCTTTGCAA
TCCAGCATCTGACCGATTCCGAAACAGGTTATCATCAAGTGGCGTGGTAA
GCCCGTCTTCATCCGTCACCGCACCCAGGACGAGATCCAGGAGGCCCAGA
AGACCGAGTGGCAGTCCCTCCGTGACCCCCAGGCCGACGAGGACCGTGTC
CAGAAGCCCGAGTGGCTTGTCATGCTTGGTACGACATACTCCTCCCCGAC
CCGCCATTGACCTCCCATCTAATATATATCCCCCTATCTAGGTGTCTGCA
CTCACCTTGGTTGTGTCCCCATCGGTGAATCCGGCGACTATGGCGGCTGG
TTCTGCCCCTGCCACGGTTCGCACTACGACATCTCCGGCCGTATAAGAAA
GGGACCCGCTCCCCTCAACCTCGAGGTTCCCCAATACAACTTCCCCTCCG
AGGACACCCTCGTCATCGGTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:2729489..2730511+

>CAN33_20515-T1 ID=CAN33_20515-T1|Name=CAN33_20515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2868bp|location=Sequence derived from alignment at NKJJ01000011.1:2729489..2730511+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGCA
ACAACTGCCCTCTTCTCGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGGG
GAGTCGCTGATGCCTCCAAGTCCACTTTCGATAGCCCCTTCGGCAGCTCC
AAGGAGTACTCTTCCACCCTGAAGATCCCCGATTTCAGCAAATACCAGTC
CAAGAAGCCCCCACGCTCCAACCAGGTCTTCTCTTACTTCATGGCCGGTT
CCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGGCCACCGTCCAGGACTTC
CTGGTCAACATGTCCGCCTCCGCCGATGTCCTCGCCCAGGCTAAGGTTGA
GATTGGCCTTGGTGCCATCCCTGAGGGCAAGAACGTTATCATCAAGTGGC
GTGGTAAGCCCGTCTTCATCCGTCACCGCACCCAGGACGAGATCCAGGAG
GCCCAGAAGACCGAGTGGCAGTCCCTCCGTGACCCCCAGGCCGACGAGGA
CCGTGTCCAGAAGCCCGAGTGGCTTGTCATGCTTGGTGTCTGCACTCACC
TTGGTTGTGTCCCCATCGGTGAATCCGGCGACTATGGCGGCTGGTTCTGC
CCCTGCCACGGTTCGCACTACGACATCTCCGGCCGTATAAGAAAGGGACC
CGCTCCCCTCAACCTCGAGGTTCCCCAATACAACTTCCCCTCCGAGGACA
CCCTCGTCATCGGTTAAATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTG
CGCGCTTGCGCCCGGCAACAACTGCCCTCTTCTCGCGCCGCCATTGCCTC
CTGCCAGCAGCGGAGGGGAGTCGCTGATGCCTCCAAGTCCACTTTCGATA
GCCCCTTCGGCAGCTCCAAGGAGTACTCTTCCACCCTGAAGATCCCCGAT
TTCAGCAAATACCAGTCCAAGAAGCCCCCACGCTCCAACCAGGTCTTCTC
TTACTTCATGGCCGGTTCCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGG
CCACCGTCCAGGACTTCCTGGTCAACATGTCCGCCTCCGCCGATGTCCTC
GCCCAGGCTAAGGTTGAGATTGGCCTTGGTGCCATCCCTGAGGGCAAGAA
CGTTATCATCAAGTGGCGTGGTAAGCCCGTCTTCATCCGTCACCGCACCC
AGGACGAGATCCAGGAGGCCCAGAAGACCGAGTGGCAGTCCCTCCGTGAC
CCCCAGGCCGACGAGGACCGTGTCCAGAAGCCCGAGTGGCTTGTCATGCT
TGGTGTCTGCACTCACCTTGGTTGTGTCCCCATCGGTGAATCCGGCGACT
ATGGCGGCTGGTTCTGCCCCTGCCACGGTTCGCACTACGACATCTCCGGC
CGTATAAGAAAGGGACCCGCTCCCCTCAACCTCGAGGTTCCCCAATACAA
CTTCCCCTCCGAGGACACCCTCGTCATCGGTTAAATGTCTCTCTCCGCCG
CTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGCAACAACTGCCCTCTTCT
CGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGGGGAGTCGCTGATGCCTC
CAAGTCCACTTTCGATAGCCCCTTCGGCAGCTCCAAGGAGTACTCTTCCA
CCCTGAAGATCCCCGATTTCAGCAAATACCAGTCCAAGAAGCCCCCACGC
TCCAACCAGGTCTTCTCTTACTTCATGGCCGGTTCCCTCGGTCTGGCCTC
TGCCGTCGGTGCTAAGGCCACCGTCCAGGACTTCCTGGTCAACATGTCCG
CCTCCGCCGATGTCCTCGCCCAGGCTAAGGTTGAGATTGGCCTTGGTGCC
ATCCCTGAGGGCAAGAACGTTATCATCAAGTGGCGTGGTAAGCCCGTCTT
CATCCGTCACCGCACCCAGGACGAGATCCAGGAGGCCCAGAAGACCGAGT
GGCAGTCCCTCCGTGACCCCCAGGCCGACGAGGACCGTGTCCAGAAGCCC
GAGTGGCTTGTCATGCTTGGTGTCTGCACTCACCTTGGTTGTGTCCCCAT
CGGTGAATCCGGCGACTATGGCGGCTGGTTCTGCCCCTGCCACGGTTCGC
ACTACGACATCTCCGGCCGTATAAGAAAGGGACCCGCTCCCCTCAACCTC
GAGGTTCCCCAATACAACTTCCCCTCCGAGGACACCCTCGTCATCGGTTA
AATGTCTCTCTCCGCCGCTTCCAGCTCTATCCTGCGCGCTTGCGCCCGGC
AACAACTGCCCTCTTCTCGCGCCGCCATTGCCTCCTGCCAGCAGCGGAGG
GGAGTCGCTGATGCCTCCAAGTCCACTTTCGATAGCCCCTTCGGCAGCTC
CAAGGAGTACTCTTCCACCCTGAAGATCCCCGATTTCAGCAAATACCAGT
CCAAGAAGCCCCCACGCTCCAACCAGGTCTTCTCTTACTTCATGGCCGGT
TCCCTCGGTCTGGCCTCTGCCGTCGGTGCTAAGGCCACCGTCCAGGACTT
CCTGGTCAACATGTCCGCCTCCGCCGATGTCCTCGCCCAGGCTAAGGTTG
AGATTGGCCTTGGTGCCATCCCTGAGGGCAAGAACGTTATCATCAAGTGG
CGTGGTAAGCCCGTCTTCATCCGTCACCGCACCCAGGACGAGATCCAGGA
GGCCCAGAAGACCGAGTGGCAGTCCCTCCGTGACCCCCAGGCCGACGAGG
ACCGTGTCCAGAAGCCCGAGTGGCTTGTCATGCTTGGTGTCTGCACTCAC
CTTGGTTGTGTCCCCATCGGTGAATCCGGCGACTATGGCGGCTGGTTCTG
CCCCTGCCACGGTTCGCACTACGACATCTCCGGCCGTATAAGAAAGGGAC
CCGCTCCCCTCAACCTCGAGGTTCCCCAATACAACTTCCCCTCCGAGGAC
ACCCTCGTCATCGGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008121ubiquinol-cytochrome-c reductase activity
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20515CAN33_20515Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20515-T1.exon1CAN33_20515-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20515-T1.exon2CAN33_20515-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20515-T1.exon3CAN33_20515-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20515-T1.exon4CAN33_20515-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20515-T1.cdsCAN33_20515-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20515-T1CAN33_20515-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264MIL
DBxrefInterPro:IPR017941
DBxrefInterPro:IPR037008
DBxrefInterPro:IPR004192
DBxrefInterPro:IPR006317
DBxrefInterPro:IPR036922
DBxrefInterPro:IPR005805
DBxrefPFAM:PF02921
DBxrefPFAM:PF00355
Productubiquinol-cytochrome c reductase iron-sulfur subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2729489..2730511 +
Powered by Drupal