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CAN33_20600-T1, CAN33_20600-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20600-T1
Unique NameCAN33_20600-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2779421..2780433+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20600-T1 ID=CAN33_20600-T1|Name=CAN33_20600-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1013bp|location=Sequence derived from alignment at NKJJ01000011.1:2779421..2780433+ (Aspergillus niger FDAARGOS_311)
ATGACCCAACCCAAAACAATCCTCATAACCGGCGCCGCCGGAGGCATTGG
CCTCGCCACATCCCGGCATTTCAACACCCTCCACCCCACCAGTACCATCA
TCCTCACTGATCTGCCCACTCACCAAGAGGCCACTGAGTCCTTGATTCAG
AGTACATTCCCGCACCCGGAAAAGGCAGTCTTTCTCCCCGCTAATATTAC
GGACTGGGGGCGAATGACACATCTATTCAGGACGATTGCACAGAAATACG
GCGGGGTGGATGTGGTGGTTGCAAATGCGGGAATGATGGAGTCTACGCCT
GTTCTAGATTTGGAGGATATTGATGAGGAGACAGGGGAGTTGAGGGAGAG
TTTGGAGGCAAGGAGGGTGGTGGATGTTAATCTGATGGGGACTTTGAATA
GTATGAATGCCTTTCTTTTCTTCTTTTGTGCTCTGGGGTGTGAGGTGCTA
ATGGTGTGAAGCTCTGCGATTGGCGATGTATCACATGAAAGAGAAGGAGA
AGAAGAACGGTTCAATTGTGCTGGTGGCTTCTACGTCGGGTTATTTTGGA
GGCACGGGTGTCACAGCTTATGTGGCTTCCAAGCATGGTGTAGTGGGATT
GCTTCGGGCGTCGCAAGTGACGGCGCAGAAGTATGGCATCCGTGTTAATG
CCGTTGCACCATTCATGACCCCAACTAGAATGACGGCTGGTTTGTCTCAA
AGCTGGCAGGATGCTGGGCTCGAGGCGAACACTCCTGAACGGGTGGCGGA
GGTTATTGAGCAGGTCGGGATGGATACGGCCCGGAGGGGCTCTTGTATGC
TGGTGAGTGCACCGAATAGCAGGAGTGATTGTGATGTACAGTCGCACTAA
GGGGTTTATGTGCTAGGTTGCTGGAAGATTTCTCAGGGAGATGGAGTCGA
CGAGGATGGCATTGCTCCCGTCATGGCTAGGTCAAGATGTTGCGGATTTC
ATGGCGAAAGCAATGAAGTTCATTGCAGACATCGGAGGCTATGTGCTTCC
TGCTCGACTATAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2779421..2780433+

>CAN33_20600-T1 ID=CAN33_20600-T1|Name=CAN33_20600-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2664bp|location=Sequence derived from alignment at NKJJ01000011.1:2779421..2780433+ (Aspergillus niger FDAARGOS_311)
ATGACCCAACCCAAAACAATCCTCATAACCGGCGCCGCCGGAGGCATTGG
CCTCGCCACATCCCGGCATTTCAACACCCTCCACCCCACCAGTACCATCA
TCCTCACTGATCTGCCCACTCACCAAGAGGCCACTGAGTCCTTGATTCAG
AGTACATTCCCGCACCCGGAAAAGGCAGTCTTTCTCCCCGCTAATATTAC
GGACTGGGGGCGAATGACACATCTATTCAGGACGATTGCACAGAAATACG
GCGGGGTGGATGTGGTGGTTGCAAATGCGGGAATGATGGAGTCTACGCCT
GTTCTAGATTTGGAGGATATTGATGAGGAGACAGGGGAGTTGAGGGAGAG
TTTGGAGGCAAGGAGGGTGGTGGATGTTAATCTGATGGGGACTTTGAATA
CTCTGCGATTGGCGATGTATCACATGAAAGAGAAGGAGAAGAAGAACGGT
TCAATTGTGCTGGTGGCTTCTACGTCGGGTTATTTTGGAGGCACGGGTGT
CACAGCTTATGTGGCTTCCAAGCATGGTGTAGTGGGATTGCTTCGGGCGT
CGCAAGTGACGGCGCAGAAGTATGGCATCCGTGTTAATGCCGTTGCACCA
TTCATGACCCCAACTAGAATGACGGCTGGTTTGTCTCAAAGCTGGCAGGA
TGCTGGGCTCGAGGCGAACACTCCTGAACGGGTGGCGGAGGTTATTGAGC
AGGTCGGGATGGATACGGCCCGGAGGGGCTCTTGTATGCTGGTTGCTGGA
AGATTTCTCAGGGAGATGGAGTCGACGAGGATGGCATTGCTCCCGTCATG
GCTAGGTCAAGATGTTGCGGATTTCATGGCGAAAGCAATGAAGTTCATTG
CAGACATCGGAGGCTATGTGCTTCCTGCTCGACTATAGATGACCCAACCC
AAAACAATCCTCATAACCGGCGCCGCCGGAGGCATTGGCCTCGCCACATC
CCGGCATTTCAACACCCTCCACCCCACCAGTACCATCATCCTCACTGATC
TGCCCACTCACCAAGAGGCCACTGAGTCCTTGATTCAGAGTACATTCCCG
CACCCGGAAAAGGCAGTCTTTCTCCCCGCTAATATTACGGACTGGGGGCG
AATGACACATCTATTCAGGACGATTGCACAGAAATACGGCGGGGTGGATG
TGGTGGTTGCAAATGCGGGAATGATGGAGTCTACGCCTGTTCTAGATTTG
GAGGATATTGATGAGGAGACAGGGGAGTTGAGGGAGAGTTTGGAGGCAAG
GAGGGTGGTGGATGTTAATCTGATGGGGACTTTGAATACTCTGCGATTGG
CGATGTATCACATGAAAGAGAAGGAGAAGAAGAACGGTTCAATTGTGCTG
GTGGCTTCTACGTCGGGTTATTTTGGAGGCACGGGTGTCACAGCTTATGT
GGCTTCCAAGCATGGTGTAGTGGGATTGCTTCGGGCGTCGCAAGTGACGG
CGCAGAAGTATGGCATCCGTGTTAATGCCGTTGCACCATTCATGACCCCA
ACTAGAATGACGGCTGGTTTGTCTCAAAGCTGGCAGGATGCTGGGCTCGA
GGCGAACACTCCTGAACGGGTGGCGGAGGTTATTGAGCAGGTCGGGATGG
ATACGGCCCGGAGGGGCTCTTGTATGCTGGTTGCTGGAAGATTTCTCAGG
GAGATGGAGTCGACGAGGATGGCATTGCTCCCGTCATGGCTAGGTCAAGA
TGTTGCGGATTTCATGGCGAAAGCAATGAAGTTCATTGCAGACATCGGAG
GCTATGTGCTTCCTGCTCGACTATAGATGACCCAACCCAAAACAATCCTC
ATAACCGGCGCCGCCGGAGGCATTGGCCTCGCCACATCCCGGCATTTCAA
CACCCTCCACCCCACCAGTACCATCATCCTCACTGATCTGCCCACTCACC
AAGAGGCCACTGAGTCCTTGATTCAGAGTACATTCCCGCACCCGGAAAAG
GCAGTCTTTCTCCCCGCTAATATTACGGACTGGGGGCGAATGACACATCT
ATTCAGGACGATTGCACAGAAATACGGCGGGGTGGATGTGGTGGTTGCAA
ATGCGGGAATGATGGAGTCTACGCCTGTTCTAGATTTGGAGGATATTGAT
GAGGAGACAGGGGAGTTGAGGGAGAGTTTGGAGGCAAGGAGGGTGGTGGA
TGTTAATCTGATGGGGACTTTGAATACTCTGCGATTGGCGATGTATCACA
TGAAAGAGAAGGAGAAGAAGAACGGTTCAATTGTGCTGGTGGCTTCTACG
TCGGGTTATTTTGGAGGCACGGGTGTCACAGCTTATGTGGCTTCCAAGCA
TGGTGTAGTGGGATTGCTTCGGGCGTCGCAAGTGACGGCGCAGAAGTATG
GCATCCGTGTTAATGCCGTTGCACCATTCATGACCCCAACTAGAATGACG
GCTGGTTTGTCTCAAAGCTGGCAGGATGCTGGGCTCGAGGCGAACACTCC
TGAACGGGTGGCGGAGGTTATTGAGCAGGTCGGGATGGATACGGCCCGGA
GGGGCTCTTGTATGCTGGTTGCTGGAAGATTTCTCAGGGAGATGGAGTCG
ACGAGGATGGCATTGCTCCCGTCATGGCTAGGTCAAGATGTTGCGGATTT
CATGGCGAAAGCAATGAAGTTCATTGCAGACATCGGAGGCTATGTGCTTC
CTGCTCGACTATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20600CAN33_20600Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20600-T1.exon1CAN33_20600-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20600-T1.exon2CAN33_20600-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20600-T1.exon3CAN33_20600-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20600-T1.cdsCAN33_20600-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20600-T1CAN33_20600-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2779421..2780433 +
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