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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3319848..3320812+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21460-T1 ID=CAN33_21460-T1|Name=CAN33_21460-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=965bp|location=Sequence derived from alignment at NKJJ01000011.1:3319848..3320812+ (Aspergillus niger FDAARGOS_311)
ATGTCGCAATTTAACGCTGCACAGTTGTTGTCGGTCGAAGGACTGGTTGT
CGTCTTAACCGGCGGAGGAACAGGTATGTTAAGCCGAGCCCCTTACTGCC
ACAACGTTCATGTAACTGACTATTTTCACCTCCCAGGATTAGGTCGCTCA
GCAGCCCTTGCCCTAGCCGAAAACGGTGCTGCCAAAGTCTTCATCCTTGG
CCGTCGAGTAGAGGTTTTGCAAGAGACCGTGTCTTTAAGCAAGAAAGACA
CAATCATTCCAGTTCAGGCGGATATCACGTCGAAAGATTCTTTGCAAGCA
GCCTATGAAACTGTCGCAGCACAGGCAGAACATGTCGATCTACTTATAGC
CAATAGCGGCTATGGGGGTTGCCAATGTCACCGTTAGGGCCAAAGCCGGA
CGGGTCAATCCCCAGTCTTCTTGAATTCCGCGATCATCTGTGGTCCTCTC
CCGAAGATGATTTCGGAAAGCTTACGGAAATCAACGTGAAAGGGACTTTT
TTCACCGTTGTTGCATTCTTGCCTCTGCTCAACGCAGCAAATGAGAGAAG
GCCGGCCCCCGTGAAAGACCGGCCCGCCGCACCCACGGCACAGGTCATCA
TAGTTGGTTCAGTAGCCGCTCATTTTCGAAATGTGCCTTATAGCATCGCA
TATAATATATCCAAGGGGGCGGTGCATCATCTGATCAAGACGCTGTCCAA
CATTTTCACACCGTACAAAATCCGTGTGAATGGTATAGCACCGGGGCTGT
TCCCTTCGGAGATGACGACGATAGCGTTTGGGATCACCGAGTCATCAGCC
TCGGATGGTGCCTTACCCAAGAGTGTATTCCCCCCCAGCCGAGCCGGTCG
CCATGAAGAGTTCGCAGGCTTGGTTCTTTGGATGGCTAGTCCCTCTGGGG
CATATGCCAATGGCAATATCACAATCATCGATGGAGGTTGGCTGAGCACG
TCGTCAAGTTGTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3319848..3320812+ >CAN33_21460-T1 ID=CAN33_21460-T1|Name=CAN33_21460-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2637bp|location=Sequence derived from alignment at NKJJ01000011.1:3319848..3320812+ (Aspergillus niger FDAARGOS_311)
ATGTCGCAATTTAACGCTGCACAGTTGTTGTCGGTCGAAGGACTGGTTGT
CGTCTTAACCGGCGGAGGAACAGGATTAGGTCGCTCAGCAGCCCTTGCCC
TAGCCGAAAACGGTGCTGCCAAAGTCTTCATCCTTGGCCGTCGAGTAGAG
GTTTTGCAAGAGACCGTGTCTTTAAGCAAGAAAGACACAATCATTCCAGT
TCAGGCGGATATCACGTCGAAAGATTCTTTGCAAGCAGCCTATGAAACTG
TCGCAGCACAGGCAGAACATCGGCTATGGGGGTTGCCAATGTCACCGTTA
GGGCCAAAGCCGGACGGGTCAATCCCCAGTCTTCTTGAATTCCGCGATCA
TCTGTGGTCCTCTCCCGAAGATGATTTCGGAAAGCTTACGGAAATCAACG
TGAAAGGGACTTTTTTCACCGTTGTTGCATTCTTGCCTCTGCTCAACGCA
GCAAATGAGAGAAGGCCGGCCCCCGTGAAAGACCGGCCCGCCGCACCCAC
GGCACAGGTCATCATAGTTGGTTCAGTAGCCGCTCATTTTCGAAATGTGC
CTTATAGCATCGCATATAATATATCCAAGGGGGCGGTGCATCATCTGATC
AAGACGCTGTCCAACATTTTCACACCGTACAAAATCCGTGTGAATGGTAT
AGCACCGGGGCTGTTCCCTTCGGAGATGACGACGATAGCGTTTGGGATCA
CCGAGTCATCAGCCTCGGATGGTGCCTTACCCAAGAGTGTATTCCCCCCC
AGCCGAGCCGGTCGCCATGAAGAGTTCGCAGGCTTGGTTCTTTGGATGGC
TAGTCCCTCTGGGGCATATGCCAATGGCAATATCACAATCATCGATGGAG
GTTGGCTGAGCACGTCGTCAAGTTGTTAGATGTCGCAATTTAACGCTGCA
CAGTTGTTGTCGGTCGAAGGACTGGTTGTCGTCTTAACCGGCGGAGGAAC
AGGATTAGGTCGCTCAGCAGCCCTTGCCCTAGCCGAAAACGGTGCTGCCA
AAGTCTTCATCCTTGGCCGTCGAGTAGAGGTTTTGCAAGAGACCGTGTCT
TTAAGCAAGAAAGACACAATCATTCCAGTTCAGGCGGATATCACGTCGAA
AGATTCTTTGCAAGCAGCCTATGAAACTGTCGCAGCACAGGCAGAACATC
GGCTATGGGGGTTGCCAATGTCACCGTTAGGGCCAAAGCCGGACGGGTCA
ATCCCCAGTCTTCTTGAATTCCGCGATCATCTGTGGTCCTCTCCCGAAGA
TGATTTCGGAAAGCTTACGGAAATCAACGTGAAAGGGACTTTTTTCACCG
TTGTTGCATTCTTGCCTCTGCTCAACGCAGCAAATGAGAGAAGGCCGGCC
CCCGTGAAAGACCGGCCCGCCGCACCCACGGCACAGGTCATCATAGTTGG
TTCAGTAGCCGCTCATTTTCGAAATGTGCCTTATAGCATCGCATATAATA
TATCCAAGGGGGCGGTGCATCATCTGATCAAGACGCTGTCCAACATTTTC
ACACCGTACAAAATCCGTGTGAATGGTATAGCACCGGGGCTGTTCCCTTC
GGAGATGACGACGATAGCGTTTGGGATCACCGAGTCATCAGCCTCGGATG
GTGCCTTACCCAAGAGTGTATTCCCCCCCAGCCGAGCCGGTCGCCATGAA
GAGTTCGCAGGCTTGGTTCTTTGGATGGCTAGTCCCTCTGGGGCATATGC
CAATGGCAATATCACAATCATCGATGGAGGTTGGCTGAGCACGTCGTCAA
GTTGTTAGATGTCGCAATTTAACGCTGCACAGTTGTTGTCGGTCGAAGGA
CTGGTTGTCGTCTTAACCGGCGGAGGAACAGGATTAGGTCGCTCAGCAGC
CCTTGCCCTAGCCGAAAACGGTGCTGCCAAAGTCTTCATCCTTGGCCGTC
GAGTAGAGGTTTTGCAAGAGACCGTGTCTTTAAGCAAGAAAGACACAATC
ATTCCAGTTCAGGCGGATATCACGTCGAAAGATTCTTTGCAAGCAGCCTA
TGAAACTGTCGCAGCACAGGCAGAACATCGGCTATGGGGGTTGCCAATGT
CACCGTTAGGGCCAAAGCCGGACGGGTCAATCCCCAGTCTTCTTGAATTC
CGCGATCATCTGTGGTCCTCTCCCGAAGATGATTTCGGAAAGCTTACGGA
AATCAACGTGAAAGGGACTTTTTTCACCGTTGTTGCATTCTTGCCTCTGC
TCAACGCAGCAAATGAGAGAAGGCCGGCCCCCGTGAAAGACCGGCCCGCC
GCACCCACGGCACAGGTCATCATAGTTGGTTCAGTAGCCGCTCATTTTCG
AAATGTGCCTTATAGCATCGCATATAATATATCCAAGGGGGCGGTGCATC
ATCTGATCAAGACGCTGTCCAACATTTTCACACCGTACAAAATCCGTGTG
AATGGTATAGCACCGGGGCTGTTCCCTTCGGAGATGACGACGATAGCGTT
TGGGATCACCGAGTCATCAGCCTCGGATGGTGCCTTACCCAAGAGTGTAT
TCCCCCCCAGCCGAGCCGGTCGCCATGAAGAGTTCGCAGGCTTGGTTCTT
TGGATGGCTAGTCCCTCTGGGGCATATGCCAATGGCAATATCACAATCAT
CGATGGAGGTTGGCTGAGCACGTCGTCAAGTTGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-25) |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3319848..3320812 + |
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