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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3383577..3384564- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21610-T1 ID=CAN33_21610-T1|Name=CAN33_21610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=988bp|location=Sequence derived from alignment at NKJJ01000011.1:3383577..3384564- (Aspergillus niger FDAARGOS_311)
ATGGACTTTCAATTCCACCCCGGTGTCAATGGCTCCGACCCTTATGTCGA
CTTCTATCCTTACACACCCTCTGCGACAGCCGGGTACGCCTTCATGGCCA
TTTTCGGCATTGCGACCCTTGTCCACTTCGTCATGATGTTTCCTTACCGC
GCCGCATACTTTATCCCGCTTGTGATCGGGGGAATATGTGCGTCGAGCCC
TTCTTTACCCTGTCCACTGCCCCAAGCCCTACCATGACATCCATCCACTC
ATTCATCCATCCATCTAACAGAATCTCCCATCAGGTGAAACCTTTGGCTA
CTATGGCCGTGCCTGGTCCCACCAAGGCCGGACCCTCATCGGCCCCTGGG
CCTTACAGGAGATGCTCATCCTCTGCGCGCCGCCCTTCATCGCCGCCACC
ATCTACATGATCCTCGGACGCATGATCGTCGCCTTCGCCGCCGAGCACCA
CTCCGTCATCCGGCCTAAATGGCTCACCAAGATCTTCGTCCTCAACGACG
TCATCTGCTTCCTGACGCAGATCGCCGGTGCCGGGGTGCAAGTCACCGGT
GACGAGCACCTCATGAAAACGGGTATCAAAGCCGTCCTGGCAGGATTGAT
TTTCTCTCTGGTGATCTTCCTATTGTTTGTGTGGGTGGCCGTTGTATTTC
ACCTGCGGTTGAGTCGCGAGCCGACGTGGGTGGTCAATGAGAATCCGTGG
TTGATGGACGGATGGAAGCGGTATATGTGGGCGTTGTATGTGGCGTGTGG
GACGTTGATGGTGAGAAACTTGGTCAGGACGGTGCAGTTTGGGGCCAATG
AGACATCGCCCTTGAATACCGAGGAGGTGTATATTTATGTGTTTGATGCC
GCGTTGATGTTTGCTTCTATGGCCGTGTTGGCGGTTTATCATCCCGGGAC
GTTGATTAAGAAGGCGAGGAGGACCAAGGAGGCGGCGGAGTATTGTCAGC
CCATGACAGACATTGGGGATGAGGGGAGGGGGGCTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3383577..3384564- >CAN33_21610-T1 ID=CAN33_21610-T1|Name=CAN33_21610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1782bp|location=Sequence derived from alignment at NKJJ01000011.1:3383577..3384564- (Aspergillus niger FDAARGOS_311)
GTGAAACCTTTGGCTACTATGGCCGTGCCTGGTCCCACCAAGGCCGGACC
CTCATCGGCCCCTGGGCCTTACAGGAGATGCTCATCCTCTGCGCGCCGCC
CTTCATCGCCGCCACCATCTACATGATCCTCGGACGCATGATCGTCGCCT
TCGCCGCCGAGCACCACTCCGTCATCCGGCCTAAATGGCTCACCAAGATC
TTCGTCCTCAACGACGTCATCTGCTTCCTGACGCAGATCGCCGGTGCCGG
GGTGCAAGTCACCGGTGACGAGCACCTCATGAAAACGGGTATCAAAGCCG
TCCTGGCAGGATTGATTTTCTCTCTGGTGATCTTCCTATTGTTTGTGTGG
GTGGCCGTTGTATTTCACCTGCGGTTGAGTCGCGAGCCGACGTGGGTGGT
CAATGAGAATCCGTGGTTGATGGACGGATGGAAGCGGTATATGTGGGCGT
TGTATGTGGCGTGTGGGACGTTGATGGTGAGAAACTTGGTCAGGACGGTG
CAGTTTGGGGCCAATGAGACATCGCCCTTGAATACCGAGGAGGTGTATAT
TTATGTGTTTGATGCCGCGTTGATGTTTGCTTCTATGGCCGTGTTGGCGG
TTTATCATCCCGGGACGTTGATTAAGAAGGCGAGGAGGACCAAGGAGGCG
GCGGAGTATTGTCAGCCCATGACAGACATTGGGGATGAGGGGAGGGGGGC
TTAAATGGACTTTCAATTCCACCCCGGTGTCAATGGCTCCGACCCTTATG
TCGACTTCTATCCTTACACACCCTCTGCGACAGCCGGGTACGCCTTCATG
GCCATTTTCGGCATTGCGACCCTTGTCCACTTCGTCATGATGTTTCCTTA
CCGCGCCGCATACTTTATCCCGCTTGTGATCGGGGGAATATGTGAAACCT
TTGGCTACTATGGCCGTGCCTGGTCCCACCAAGGCCGGACCCTCATCGGC
CCCTGGGCCTTACAGGAGATGCTCATCCTCTGCGCGCCGCCCTTCATCGC
CGCCACCATCTACATGATCCTCGGACGCATGATCGTCGCCTTCGCCGCCG
AGCACCACTCCGTCATCCGGCCTAAATGGCTCACCAAGATCTTCGTCCTC
AACGACGTCATCTGCTTCCTGACGCAGATCGCCGGTGCCGGGGTGCAAGT
CACCGGTGACGAGCACCTCATGAAAACGGGTATCAAAGCCGTCCTGGCAG
GATTGATTTTCTCTCTGGTGATCTTCCTATTGTTTGTGTGGGTGGCCGTT
GTATTTCACCTGCGGTTGAGTCGCGAGCCGACGTGGGTGGTCAATGAGAA
TCCGTGGTTGATGGACGGATGGAAGCGGTATATGTGGGCGTTGTATGTGG
CGTGTGGGACGTTGATGGTGAGAAACTTGGTCAGGACGGTGCAGTTTGGG
GCCAATGAGACATCGCCCTTGAATACCGAGGAGGTGTATATTTATGTGTT
TGATGCCGCGTTGATGTTTGCTTCTATGGCCGTGTTGGCGGTTTATCATC
CCGGGACGTTGATTAAGAAGGCGAGGAGGACCAAGGAGGCGGCGGAGTAT
TGTCAGCCCATGACAGACATTGGGGATGAGGGGAGGGGGGCTTAAATGGA
CTTTCAATTCCACCCCGGTGTCAATGGCTCCGACCCTTATGTCGACTTCT
ATCCTTACACACCCTCTGCGACAGCCGGGTACGCCTTCATGGCCATTTTC
GGCATTGCGACCCTTGTCCACTTCGTCATGATGTTTCCTTACCGCGCCGC
ATACTTTATCCCGCTTGTGATCGGGGGAATAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3383577..3384564 - |
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