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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:243896..245361+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22195-T1 ID=CAN33_22195-T1|Name=CAN33_22195-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1466bp|location=Sequence derived from alignment at NKJJ01000002.1:243896..245361+ (Aspergillus niger FDAARGOS_311)
ATGGCTGACATAGATGAGGCCGTCATTCATATGCCTTCGCAGGATGCGAG
CGCTCACATTGACACCGACCTCTCCGACGAGACTCAGGACTTCCGCATGC
TGAATAGCATTTCCTTGTCAGTGCTACCACGCGTTTCTTCTGGTCCCTAC
CTCATTTACAGCTAAATGCGCATATGACATGCTAACAATGGAGAAAACAG
CCTTACAGATGGATCTCAACAAAGTCTCCCCAAACGCGGTGAAAAGGACT
TCGAACCGAACCCGACGCTCTTTCAAGCCGACATTCTCTCCGCCTCGCGG
CAGGCCATGCACAATGCTCTCTCGTACCCTCGTCTACACCACCCAAAGAC
ACAAGTGATTGGAATATACTCTCCCAATGGTCCGGTCCCGCCGCGATCTG
CCCAAAAGCTAGATACGATTACTGAAGAGTCGGAGCCCTCGAAACCCGCA
GGCACGGAAATGGGCGTCCATCCCGACTCATGTGTCTATGTGCCCACCCC
CAAGGGACAGTACTTCAAATCGATAGGTCAGGCAGATCGTTGGAACCGCA
TATGGCTACTTCCAGAGGAGGCTCTATATCTGCTTGAGAGAGGGACTCTA
GATATCAGGTGGCCCTGCTCGGAGGTCGGGTGTGCTGACGAGGAGGGAGC
GGACGACTCTGGAATCCCCATGAGCTTACAGGCTGCTTATGCGGCTTTTA
TGGGGCGGAGCGGTCTGACTAGTGAGCGGTACTCGGTTTATGCGGGATTG
AGGCGGTTGGGGTATACGATCATTCGTGCCCCGGGATGGCACGATGGAGA
GGAGGGTGCAGAGACCAGCGAATCACAGCAAACCGTACTGGAGAAGCCTC
AGGGTCTAGGTCTTGGGATTGCTGGGGTGTTTAGACAGCTTTTGCAGTGG
CTGTACAAACCTGGTAGCGCTACAACTGCGTTGGGGCCTGTTGTGGGGCT
TGGGATTCATCGCAGTTATGGTACGTTTCCTGCTTGCCACTGCGCTTGCG
ATTTGCTGACAATGTTTCAGATGACATATATCAGAAGCTCTCTATCATCC
CCTGGTATGACCCGACTGCCTCACCATCTCCTCCGCCTCCCACGACCCCG
CCCTACCGTGTAGTCTTCCATATCTACAAACCATCCACACCATTCAAGAA
ATCCGCCCCTCCGACCCCCGACTTTAGGCTCGCCGTTGTGAATGCACGCA
CGCACACCACAATTCCGACATCAGCTCAGCTTGGCGCATTGCTCGAGAGC
ACCCCGCTTGACCCACCGGTGGGCGAGAAGATGAGTCGCCAGCTGTACCA
GCGACTCCGGTACGGATACAGAAATGTGATCCTGGCTGTAGTAGACGAGG
GAGTTGTGAGCTACCTCCGCATCGCGGACTCGGCATTCGGCAAGGAGAAG
CTCTACAAGGAGAAGAACGCTAAAGGAAACAAGGGACCCTGGCGTCCACG
GCCAAAAGGGCGCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:243896..245361+ >CAN33_22195-T1 ID=CAN33_22195-T1|Name=CAN33_22195-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3996bp|location=Sequence derived from alignment at NKJJ01000002.1:243896..245361+ (Aspergillus niger FDAARGOS_311)
ATGGCTGACATAGATGAGGCCGTCATTCATATGCCTTCGCAGGATGCGAG
CGCTCACATTGACACCGACCTCTCCGACGAGACTCAGGACTTCCGCATGC
TGAATAGCATTTCCTTCCTTACAGATGGATCTCAACAAAGTCTCCCCAAA
CGCGGTGAAAAGGACTTCGAACCGAACCCGACGCTCTTTCAAGCCGACAT
TCTCTCCGCCTCGCGGCAGGCCATGCACAATGCTCTCTCGTACCCTCGTC
TACACCACCCAAAGACACAAGTGATTGGAATATACTCTCCCAATGGTCCG
GTCCCGCCGCGATCTGCCCAAAAGCTAGATACGATTACTGAAGAGTCGGA
GCCCTCGAAACCCGCAGGCACGGAAATGGGCGTCCATCCCGACTCATGTG
TCTATGTGCCCACCCCCAAGGGACAGTACTTCAAATCGATAGGTCAGGCA
GATCGTTGGAACCGCATATGGCTACTTCCAGAGGAGGCTCTATATCTGCT
TGAGAGAGGGACTCTAGATATCAGGTGGCCCTGCTCGGAGGTCGGGTGTG
CTGACGAGGAGGGAGCGGACGACTCTGGAATCCCCATGAGCTTACAGGCT
GCTTATGCGGCTTTTATGGGGCGGAGCGGTCTGACTAGTGAGCGGTACTC
GGTTTATGCGGGATTGAGGCGGTTGGGGTATACGATCATTCGTGCCCCGG
GATGGCACGATGGAGAGGAGGGTGCAGAGACCAGCGAATCACAGCAAACC
GTACTGGAGAAGCCTCAGGGTCTAGGTCTTGGGATTGCTGGGGTGTTTAG
ACAGCTTTTGCAGTGGCTGTACAAACCTGGTAGCGCTACAACTGCGTTGG
GGCCTGTTGTGGGGCTTGGGATTCATCGCAGTTATGATGACATATATCAG
AAGCTCTCTATCATCCCCTGGTATGACCCGACTGCCTCACCATCTCCTCC
GCCTCCCACGACCCCGCCCTACCGTGTAGTCTTCCATATCTACAAACCAT
CCACACCATTCAAGAAATCCGCCCCTCCGACCCCCGACTTTAGGCTCGCC
GTTGTGAATGCACGCACGCACACCACAATTCCGACATCAGCTCAGCTTGG
CGCATTGCTCGAGAGCACCCCGCTTGACCCACCGGTGGGCGAGAAGATGA
GTCGCCAGCTGTACCAGCGACTCCGGTACGGATACAGAAATGTGATCCTG
GCTGTAGTAGACGAGGGAGTTGTGAGCTACCTCCGCATCGCGGACTCGGC
ATTCGGCAAGGAGAAGCTCTACAAGGAGAAGAACGCTAAAGGAAACAAGG
GACCCTGGCGTCCACGGCCAAAAGGGCGCTGAATGGCTGACATAGATGAG
GCCGTCATTCATATGCCTTCGCAGGATGCGAGCGCTCACATTGACACCGA
CCTCTCCGACGAGACTCAGGACTTCCGCATGCTGAATAGCATTTCCTTCC
TTACAGATGGATCTCAACAAAGTCTCCCCAAACGCGGTGAAAAGGACTTC
GAACCGAACCCGACGCTCTTTCAAGCCGACATTCTCTCCGCCTCGCGGCA
GGCCATGCACAATGCTCTCTCGTACCCTCGTCTACACCACCCAAAGACAC
AAGTGATTGGAATATACTCTCCCAATGGTCCGGTCCCGCCGCGATCTGCC
CAAAAGCTAGATACGATTACTGAAGAGTCGGAGCCCTCGAAACCCGCAGG
CACGGAAATGGGCGTCCATCCCGACTCATGTGTCTATGTGCCCACCCCCA
AGGGACAGTACTTCAAATCGATAGGTCAGGCAGATCGTTGGAACCGCATA
TGGCTACTTCCAGAGGAGGCTCTATATCTGCTTGAGAGAGGGACTCTAGA
TATCAGGTGGCCCTGCTCGGAGGTCGGGTGTGCTGACGAGGAGGGAGCGG
ACGACTCTGGAATCCCCATGAGCTTACAGGCTGCTTATGCGGCTTTTATG
GGGCGGAGCGGTCTGACTAGTGAGCGGTACTCGGTTTATGCGGGATTGAG
GCGGTTGGGGTATACGATCATTCGTGCCCCGGGATGGCACGATGGAGAGG
AGGGTGCAGAGACCAGCGAATCACAGCAAACCGTACTGGAGAAGCCTCAG
GGTCTAGGTCTTGGGATTGCTGGGGTGTTTAGACAGCTTTTGCAGTGGCT
GTACAAACCTGGTAGCGCTACAACTGCGTTGGGGCCTGTTGTGGGGCTTG
GGATTCATCGCAGTTATGATGACATATATCAGAAGCTCTCTATCATCCCC
TGGTATGACCCGACTGCCTCACCATCTCCTCCGCCTCCCACGACCCCGCC
CTACCGTGTAGTCTTCCATATCTACAAACCATCCACACCATTCAAGAAAT
CCGCCCCTCCGACCCCCGACTTTAGGCTCGCCGTTGTGAATGCACGCACG
CACACCACAATTCCGACATCAGCTCAGCTTGGCGCATTGCTCGAGAGCAC
CCCGCTTGACCCACCGGTGGGCGAGAAGATGAGTCGCCAGCTGTACCAGC
GACTCCGGTACGGATACAGAAATGTGATCCTGGCTGTAGTAGACGAGGGA
GTTGTGAGCTACCTCCGCATCGCGGACTCGGCATTCGGCAAGGAGAAGCT
CTACAAGGAGAAGAACGCTAAAGGAAACAAGGGACCCTGGCGTCCACGGC
CAAAAGGGCGCTGAATGGCTGACATAGATGAGGCCGTCATTCATATGCCT
TCGCAGGATGCGAGCGCTCACATTGACACCGACCTCTCCGACGAGACTCA
GGACTTCCGCATGCTGAATAGCATTTCCTTCCTTACAGATGGATCTCAAC
AAAGTCTCCCCAAACGCGGTGAAAAGGACTTCGAACCGAACCCGACGCTC
TTTCAAGCCGACATTCTCTCCGCCTCGCGGCAGGCCATGCACAATGCTCT
CTCGTACCCTCGTCTACACCACCCAAAGACACAAGTGATTGGAATATACT
CTCCCAATGGTCCGGTCCCGCCGCGATCTGCCCAAAAGCTAGATACGATT
ACTGAAGAGTCGGAGCCCTCGAAACCCGCAGGCACGGAAATGGGCGTCCA
TCCCGACTCATGTGTCTATGTGCCCACCCCCAAGGGACAGTACTTCAAAT
CGATAGGTCAGGCAGATCGTTGGAACCGCATATGGCTACTTCCAGAGGAG
GCTCTATATCTGCTTGAGAGAGGGACTCTAGATATCAGGTGGCCCTGCTC
GGAGGTCGGGTGTGCTGACGAGGAGGGAGCGGACGACTCTGGAATCCCCA
TGAGCTTACAGGCTGCTTATGCGGCTTTTATGGGGCGGAGCGGTCTGACT
AGTGAGCGGTACTCGGTTTATGCGGGATTGAGGCGGTTGGGGTATACGAT
CATTCGTGCCCCGGGATGGCACGATGGAGAGGAGGGTGCAGAGACCAGCG
AATCACAGCAAACCGTACTGGAGAAGCCTCAGGGTCTAGGTCTTGGGATT
GCTGGGGTGTTTAGACAGCTTTTGCAGTGGCTGTACAAACCTGGTAGCGC
TACAACTGCGTTGGGGCCTGTTGTGGGGCTTGGGATTCATCGCAGTTATG
ATGACATATATCAGAAGCTCTCTATCATCCCCTGGTATGACCCGACTGCC
TCACCATCTCCTCCGCCTCCCACGACCCCGCCCTACCGTGTAGTCTTCCA
TATCTACAAACCATCCACACCATTCAAGAAATCCGCCCCTCCGACCCCCG
ACTTTAGGCTCGCCGTTGTGAATGCACGCACGCACACCACAATTCCGACA
TCAGCTCAGCTTGGCGCATTGCTCGAGAGCACCCCGCTTGACCCACCGGT
GGGCGAGAAGATGAGTCGCCAGCTGTACCAGCGACTCCGGTACGGATACA
GAAATGTGATCCTGGCTGTAGTAGACGAGGGAGTTGTGAGCTACCTCCGC
ATCGCGGACTCGGCATTCGGCAAGGAGAAGCTCTACAAGGAGAAGAACGC
TAAAGGAAACAAGGGACCCTGGCGTCCACGGCCAAAAGGGCGCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263AZP |
| DBxref | InterPro:IPR024336 |
| DBxref | PFAM:PF12928 |
| Product | tRNA-splicing endonuclease subunit sen54 N-term family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:243896..245361 + |
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