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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:508806..510725- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_22600-T1 ID=CAN33_22600-T1|Name=CAN33_22600-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1920bp|location=Sequence derived from alignment at NKJJ01000002.1:508806..510725- (Aspergillus niger FDAARGOS_311)
ATGGATTTTCCCACTAGTCTCGACTTTTTCCCTGCAGAGCTTGTCATCTG
GATAGGTGAATTCTTGGACCGGAAGACATTGGCCGCCTTTATCCGTTCGA
AGCGATATGCCCGGCTCTTGACACCCCAGCTTTTAACTCTGTGGCTCTCG
TGCAAAACTGGCAAGTATTGCTTCAGGCGTAATTGGCCTGAAACACAGCA
CTGGAAGTCATCTCATATAGTCGATTTTTTCCAGAACTTCCCGTCTGATG
TATCTCAGATCTACTGTTGCTCTACATTGCTGTTTCGGTTTGCCGATGGA
GGTAACCTAGAGCTCGTGAAGCTCATGTTATCTAGGGGCGCAGATCTCGA
GGCAAAAGGCGCGAATGGGGAGACTCCTCTGCATATTGCTACCAGTGGAG
GACATATTCAGGTCGTCCAGGCATTGCTGGAAGCCGGGGCAGATGCCAGT
GCCAAAGGCAGGTATGGAGATACACTACTGCAGAGAGCGGCATCCATGGG
GAAGCCGGCCATGATCCGATACCTGATTAGCTCAGGACAATACACGCTGG
AAGCCCTACTGGAAGCGTTTGAACGGGGTATGAAGTGCTTCTTCCCAAAA
GTCTGTGCAGAAGTCTGTGCAGAAGTCTGGCCCGCTCTCGAAAATGCCGG
CTATAAGTTCAACGCGACTGGCACTGACGGTCAAATATACCTTCACTTCG
CCGCTAAGAGAGGACTTAGCTTTCTTGTGCAGTTCTTTCTTGATAGGGGC
CATGACCCCTTTCGCTTGGATGAAAAGGGAAATACAGCCTTGAGCATCGC
CTGCTCAGAAGTTTTTTCTCGCTCGGAGGATATGTTAGAAACTCCGAAGC
TACTCATTAACGCAATGCAAGCCGCTGGCGGTGACCCTTTCAAAGCAAAC
CGAGAGGGTGTTACTCCACTGCACAAAGCCATTCAGAAATCGCAGGTTGA
TCTAGTCAGATTATTTCTCGATTCCGGAGCAAGTGTGACTGCTCGGGGTA
AGAATGGGATTAAATGCATGGAAAGAGCACTACGAGGTCCTAGAGATATG
TTTGAGCTGCTCGTTGACCGTGAACCCGCCTTATGGCCCACCCACATGCT
ACAATCAAGCCTTCATGGTTATACAGTCGAGTTGAAAAAAGGACGAGGTT
ACCAGGATACTCCGAAGGCTATAGCAAGGATCCTGAAACTCGCCAAATCT
GGCAAGGCAGCAATCAATGTCTCCACCAGGGACAGCTCGGGATCTACTCC
GCTTCATAATACATGTCTGGCTAGGCACAACTCTGCTGAGGTTCCTGGGC
TCATTCGCTCTTTCATCGAAGCAGGGGCAGATATAGACATGCCAGATGAC
GAAGGCCGAACACCTCTCCACAATATACTCAGGGTATCTACTCCAAAATC
TGAGCGGGAGATCATACAGACGATGATAAATCTCAGCAAGAATATCAACA
AGCTGAGCAAAGCTGGTGATAGTTATTTGCATTTAGCAGCTGACGCCAAC
CAGCTACGTGCTGTACAGCTGCTGTTGAGCAAAATGAGCAAGGACACTGT
GTTCGCGGCCAATGAGTCCGGCTACACCAGTCTGCATTATGCCGCAATAT
CCGAAAATACCTCGATAATTCAGCAGATCCTAGCCACCGGTATCGATGTA
AACGCCAAGGACCGGCATGGACGGACGGCTTTACACTACATAGACGACAA
GCACAATGAGTCATGTGTTGCGGTACTGATCGAAGCCGGGGCAGATGTGA
ATATATTGGACAATGAAGGGAGACCACCAATCCATCATGCGTCGATATGG
GGGAAGGATGGGATGATGGAGCTTTATGTGAAAGGGGGAGCTTCTGAGCA
CGAAGGCTGCGATTCTTGCAACAGATACATCAAATCAACCAGGGAGTGGC
TAAAGGAAGTTGGCTGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:508806..510725- >CAN33_22600-T1 ID=CAN33_22600-T1|Name=CAN33_22600-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1920bp|location=Sequence derived from alignment at NKJJ01000002.1:508806..510725- (Aspergillus niger FDAARGOS_311)
ATGGATTTTCCCACTAGTCTCGACTTTTTCCCTGCAGAGCTTGTCATCTG
GATAGGTGAATTCTTGGACCGGAAGACATTGGCCGCCTTTATCCGTTCGA
AGCGATATGCCCGGCTCTTGACACCCCAGCTTTTAACTCTGTGGCTCTCG
TGCAAAACTGGCAAGTATTGCTTCAGGCGTAATTGGCCTGAAACACAGCA
CTGGAAGTCATCTCATATAGTCGATTTTTTCCAGAACTTCCCGTCTGATG
TATCTCAGATCTACTGTTGCTCTACATTGCTGTTTCGGTTTGCCGATGGA
GGTAACCTAGAGCTCGTGAAGCTCATGTTATCTAGGGGCGCAGATCTCGA
GGCAAAAGGCGCGAATGGGGAGACTCCTCTGCATATTGCTACCAGTGGAG
GACATATTCAGGTCGTCCAGGCATTGCTGGAAGCCGGGGCAGATGCCAGT
GCCAAAGGCAGGTATGGAGATACACTACTGCAGAGAGCGGCATCCATGGG
GAAGCCGGCCATGATCCGATACCTGATTAGCTCAGGACAATACACGCTGG
AAGCCCTACTGGAAGCGTTTGAACGGGGTATGAAGTGCTTCTTCCCAAAA
GTCTGTGCAGAAGTCTGTGCAGAAGTCTGGCCCGCTCTCGAAAATGCCGG
CTATAAGTTCAACGCGACTGGCACTGACGGTCAAATATACCTTCACTTCG
CCGCTAAGAGAGGACTTAGCTTTCTTGTGCAGTTCTTTCTTGATAGGGGC
CATGACCCCTTTCGCTTGGATGAAAAGGGAAATACAGCCTTGAGCATCGC
CTGCTCAGAAGTTTTTTCTCGCTCGGAGGATATGTTAGAAACTCCGAAGC
TACTCATTAACGCAATGCAAGCCGCTGGCGGTGACCCTTTCAAAGCAAAC
CGAGAGGGTGTTACTCCACTGCACAAAGCCATTCAGAAATCGCAGGTTGA
TCTAGTCAGATTATTTCTCGATTCCGGAGCAAGTGTGACTGCTCGGGGTA
AGAATGGGATTAAATGCATGGAAAGAGCACTACGAGGTCCTAGAGATATG
TTTGAGCTGCTCGTTGACCGTGAACCCGCCTTATGGCCCACCCACATGCT
ACAATCAAGCCTTCATGGTTATACAGTCGAGTTGAAAAAAGGACGAGGTT
ACCAGGATACTCCGAAGGCTATAGCAAGGATCCTGAAACTCGCCAAATCT
GGCAAGGCAGCAATCAATGTCTCCACCAGGGACAGCTCGGGATCTACTCC
GCTTCATAATACATGTCTGGCTAGGCACAACTCTGCTGAGGTTCCTGGGC
TCATTCGCTCTTTCATCGAAGCAGGGGCAGATATAGACATGCCAGATGAC
GAAGGCCGAACACCTCTCCACAATATACTCAGGGTATCTACTCCAAAATC
TGAGCGGGAGATCATACAGACGATGATAAATCTCAGCAAGAATATCAACA
AGCTGAGCAAAGCTGGTGATAGTTATTTGCATTTAGCAGCTGACGCCAAC
CAGCTACGTGCTGTACAGCTGCTGTTGAGCAAAATGAGCAAGGACACTGT
GTTCGCGGCCAATGAGTCCGGCTACACCAGTCTGCATTATGCCGCAATAT
CCGAAAATACCTCGATAATTCAGCAGATCCTAGCCACCGGTATCGATGTA
AACGCCAAGGACCGGCATGGACGGACGGCTTTACACTACATAGACGACAA
GCACAATGAGTCATGTGTTGCGGTACTGATCGAAGCCGGGGCAGATGTGA
ATATATTGGACAATGAAGGGAGACCACCAATCCATCATGCGTCGATATGG
GGGAAGGATGGGATGATGGAGCTTTATGTGAAAGGGGGAGCTTCTGAGCA
CGAAGGCTGCGATTCTTGCAACAGATACATCAAATCAACCAGGGAGTGGC
TAAAGGAAGTTGGCTGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:508806..510725 - |
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