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CAN33_2265-T1, CAN33_2265-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2265-T1
Unique NameCAN33_2265-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1390917..1392595-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2265-T1 ID=CAN33_2265-T1|Name=CAN33_2265-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1679bp|location=Sequence derived from alignment at NKJJ01000004.1:1390917..1392595- (Aspergillus niger FDAARGOS_311)
ATGGACCACGAAATCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGA
CCCCTCCAACAACAATAACAATCGTCACGCGACTCGCCCTGCTCACCACC
ACCGTCTCCCCTCGCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGT
GATCCAGCGCTTTTCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAA
CTACAATAATGCGCCTGTTAGTCGGAAGCGCCGGTACCGCGGCACGTGGT
GGGGAGAGATGGTGAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTC
AAGGAGAAGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTA
TGACTCTGGTCCGGGGTCGGGGTTCTTGCCTTCTGATGCGGATTTGGGAG
AGGATTGGCTGAACTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCG
CAGACTCAAAGTCAACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCG
CGAGCATCAAGTCGCACGGGGAATCGTGAATGATTGTCTCGAGAGGGGGA
GGATAGTGTTGATTTGAGGTAATCCCCTACATTTCTTCGCCCATCATCCA
GAAACAACCTTAACCTATATCCATGTCTAGCGGCCTCACCCTCCGCCTCA
TACCCCCAAACCTCCTCCTCCCCCTCCAACACCTCACCAAACTCCCAACC
ATCAGGGAGCCCCCCATCAGCGAAGACGTCTACACCTCCCTCCAACCATT
CCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCCAAGTCCCCGGCGAGA
TCTTCGACCTCGACTCCCTCCGCGTCCTCAGTCTCCGCTACAACAAACTT
ACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCTCCTCCAGGAACTAAA
CATCTCCGTGAACCGCCTCCCCACCCTCCCATGGGAACTCCTCTTCCTCA
TCCGCAAAGGCGACCTCAAACACCTTACCGTTCGCCCGAACCCCCTCCTC
CAAATCGAAGACCAGCCCATCGCCCAATGGCACGTTCCAACCGACCAAGA
GACCCAAGAACCACAACTGAAATCAGTAACATATGACGGCCCACCTCCGG
AGGAAGCATGGGCACCTGTACACGTCGCTACCGGCCCAGTTACATACTAC
AACGCCGAAGGCGTACCAGTCTCCTCCCAAATCCCTACTGAACAAACCAA
CCACCAAACAATAAACACCAGCAGCAGCAGCAGCATCTCCCGCGTCCCCT
CCCTCCGCGAAATCTCCCTCCTAGCATTCACCCGCTCGACATACCCGGAC
CTGATCACAGACGAAGAAATGGAGGATTTCCCGGCCCTGATGACCCGCTT
ACTCCGGCAAGCGAAAGAGATTCGTAGCGCGGGGGGCAGGAACTGCTCGT
CATGTCACCGGGGCTTTGTGCTCGCGCGGACAGAGTGGATCGAGTGGTGG
GATGTCAGTACGTATGAGAATGGGTTGAAGGGACCTAGGGCATCTGGGGA
AGTGTTGAGGCCGTTGCCGTTTAGGAGAGTTGGGTGTAGTTGGGGATGTG
TGCCTGAGGTTGTTTGATTCTGATGTCATGACGGGAATGTATGTATAGTA
AGTTTGGTTGTGGGTATGTATGTATGGATGGATGGATGGATGTAAATGAT
TATATTCTCATTAGGGGTGTGAGTTCTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1390917..1392595-

>CAN33_2265-T1 ID=CAN33_2265-T1|Name=CAN33_2265-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2952bp|location=Sequence derived from alignment at NKJJ01000004.1:1390917..1392595- (Aspergillus niger FDAARGOS_311)
TTCTAGCCCCCCATCAGCGAAGACGTCTACACCTCCCTCCAACCATTCCT
CCGCCTCTTCCTCGCCGGCAACGCCCTAACCCAAGTCCCCGGCGAGATCT
TCGACCTCGACTCCCTCCGCGTCCTCAGTCTCCGCTACAACAAACTTACC
TCCATCCCCCCGGCAATCCGCTCCCTCACCCTCCTCCAGGAACTAAACAT
CTCCGTGAACCGCCTCCCCACCCTCCCATGGGAACTCCTCTTCCTCATCC
GCAAAGGCGACCTCAAACACCTTACCGTTCGCCCGAACCCCCTCCTCCAA
ATCGAAGACCAGCCCATCGCCCAATGGCACGTTCCAACCGACCAAGAGAC
CCAAGAACCACAACTGAAATCAGTAACATATGACGGCCCACCTCCGGAGG
AAGCATGGGCACCTGTACACGTCGCTACCGGCCCAGTTACATACTACAAC
GCCGAAGGCATGGACCACGAAATCCCACTCCCCCCACCACCGCGCATCCG
CCATCGCGACCCCTCCAACAACAATAACAATCGTCACGCGACTCGCCCTG
CTCACCACCACCGTCTCCCCTCGCGCTTCATTGACGACCGCTCCAGTCAA
CCTTCCAGTGATCCAGCGCTTTTCTCCAGTGACGATATCCCCGCCTCAGG
ACTAGAGAACTACAATAATGCGCCTGTTAGTCGGAAGCGCCGGTACCGCG
GCACGTGGTGGGGAGAGATGGTGAAGGACAAGGACGCGAAGCGCAAACGG
GCGGATTTCAAGGAGAAGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAG
TGATGATTATGACTCTGGTCCGGGGTCGGGGTTCTTGCCTTCTGATGCGG
ATTTGGGAGAGGATTGGCTGAACTCTCATGCGAATGGAGGTTCAAAGACG
GTGACACCGCAGACTCAAAGTCAACAACAAGGATTCAGAAAAGTTGAGGA
AGAACCGCGCGAGCATCAAGTCGCACGGGGAATCTTCTAGCCCCCCATCA
GCGAAGACGTCTACACCTCCCTCCAACCATTCCTCCGCCTCTTCCTCGCC
GGCAACGCCCTAACCCAAGTCCCCGGCGAGATCTTCGACCTCGACTCCCT
CCGCGTCCTCAGTCTCCGCTACAACAAACTTACCTCCATCCCCCCGGCAA
TCCGCTCCCTCACCCTCCTCCAGGAACTAAACATCTCCGTGAACCGCCTC
CCCACCCTCCCATGGGAACTCCTCTTCCTCATCCGCAAAGGCGACCTCAA
ACACCTTACCGTTCGCCCGAACCCCCTCCTCCAAATCGAAGACCAGCCCA
TCGCCCAATGGCACGTTCCAACCGACCAAGAGACCCAAGAACCACAACTG
AAATCAGTAACATATGACGGCCCACCTCCGGAGGAAGCATGGGCACCTGT
ACACGTCGCTACCGGCCCAGTTACATACTACAACGCCGAAGGCATGGACC
ACGAAATCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGACCCCTCC
AACAACAATAACAATCGTCACGCGACTCGCCCTGCTCACCACCACCGTCT
CCCCTCGCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGTGATCCAG
CGCTTTTCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAACTACAAT
AATGCGCCTGTTAGTCGGAAGCGCCGGTACCGCGGCACGTGGTGGGGAGA
GATGGTGAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTCAAGGAGA
AGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTATGACTCT
GGTCCGGGGTCGGGGTTCTTGCCTTCTGATGCGGATTTGGGAGAGGATTG
GCTGAACTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCGCAGACTC
AAAGTCAACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCGCGAGCAT
CAAGTCGCACGGGGAATCTTCTAGCCCCCCATCAGCGAAGACGTCTACAC
CTCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCC
AAGTCCCCGGCGAGATCTTCGACCTCGACTCCCTCCGCGTCCTCAGTCTC
CGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCT
CCTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCACCCTCCCATGGG
AACTCCTCTTCCTCATCCGCAAAGGCGACCTCAAACACCTTACCGTTCGC
CCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGGCACGT
TCCAACCGACCAAGAGACCCAAGAACCACAACTGAAATCAGTAACATATG
ACGGCCCACCTCCGGAGGAAGCATGGGCACCTGTACACGTCGCTACCGGC
CCAGTTACATACTACAACGCCGAAGGCATGGACCACGAAATCCCACTCCC
CCCACCACCGCGCATCCGCCATCGCGACCCCTCCAACAACAATAACAATC
GTCACGCGACTCGCCCTGCTCACCACCACCGTCTCCCCTCGCGCTTCATT
GACGACCGCTCCAGTCAACCTTCCAGTGATCCAGCGCTTTTCTCCAGTGA
CGATATCCCCGCCTCAGGACTAGAGAACTACAATAATGCGCCTGTTAGTC
GGAAGCGCCGGTACCGCGGCACGTGGTGGGGAGAGATGGTGAAGGACAAG
GACGCGAAGCGCAAACGGGCGGATTTCAAGGAGAAGCGCTTGGTGGATAG
TGGTGTGTGGATGGGAAGTGATGATTATGACTCTGGTCCGGGGTCGGGGT
TCTTGCCTTCTGATGCGGATTTGGGAGAGGATTGGCTGAACTCTCATGCG
AATGGAGGTTCAAAGACGGTGACACCGCAGACTCAAAGTCAACAACAAGG
ATTCAGAAAAGTTGAGGAAGAACCGCGCGAGCATCAAGTCGCACGGGGAA
TC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2265CAN33_2265Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2265-T1CAN33_2265-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2265-T1.cdsCAN33_2265-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2265-T1.exon3CAN33_2265-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_2265-T1.exon2CAN33_2265-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2265-T1.exon1CAN33_2265-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR003591
DBxrefPFAM:PF13855
DBxrefPFAM:PF12799
ProductLeucine Rich repeats (2 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1390917..1392595 -
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