You are here

Home

CAN33_22890-T1, CAN33_22890-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_22890-T1
Unique NameCAN33_22890-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:704869..706585+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_22890-T1 ID=CAN33_22890-T1|Name=CAN33_22890-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1717bp|location=Sequence derived from alignment at NKJJ01000002.1:704869..706585+ (Aspergillus niger FDAARGOS_311)
ATGGGTGACAAGGATGACGGTCCGCTACAGGTTAGTCTGCCTAAAATTGT
GCGCGCCTTTCGCCAACACAAACGCAATGGCCGGTGCCAAACGGGATGTA
AACAGCTGATGCTGAGATCGAATCGCGTCGTAGGACCTGGAAAAGACATA
CTGCCCTCCTCTGGACCCTGCCTTACTCACAGCCATCGCCTTCGACTATG
ACCTTACCGACTCTGCTCAACTTGGCCAACTGCGCGAGACTCTTGATGCA
CTTCGGCTGTCAGCATGGGAACAGGAGGATTTACCCTTCGACCCCTCCGG
CACGTCCGGTTTAGGTGCAGGACATGGTCTAGAAGCGGATGGGTCCTCTG
AGCTTAGTGAGTCCCAGGGAGACCGGTCGCGGGAGACAGATGTCACTAGC
CTCACGTCGGGCTTCTCTTCGGTCGGTATCAGGGACCATGTCTCGTATAC
TATTGGACCGGATGGGTCTCTCCATCTATCCGGCGCGAATGAAGAGGATA
AGATTGGCTACTTGACTGAGATGTTCCCGTCAGTTGACCGGTTTACCATC
CAGCACACGTTGAAGAAGTCTAATGGGGACATTGATCGCTCGATGGACGT
CCTTCTCAACTTGTCGTTCTTTGATGAGCAAGTACCTGATGAGGATGGGG
TGGTCACTGTCCCTAAGGGGGTGGATGGCTTTGATGACCCGGGAGCAAGC
AAGAAGCAAGCTCGTAAGCGTAAACCCAAGAACAAGAATGGCCGAAGACA
AGAGGTCCTATCATCCATGAGCTCTGAGGCTAGTTTCGAGAATACAACGA
ACAAGTGGGATGCTGCTGGAAAGGACGTTGAGTTCATTCATGCGCGAACC
TCGGCGATACTGAAAAAGGAGACCGTCCGCTCAACTTATCACGCTAATGG
GGCCTCACTTCCTGCTACAATCAGGGCTCTTGCCGATACACACGCCCCTA
AGAAGCAGATCGATGAGGATCCGGTGACGGTTACGCAAGTGGCCGAGCTT
ACGCAAGAATTTCCGTCGGTGCCACCGCTCACATTTGCCGGCTTGCTTAA
AATCACGAGAAGTTCTGTATCAGCCGCCAGTGAGCTCGCGGCGGCTATGC
TGACAAGCCCCGTGGCTCCGTCCATAACTGAGATAATCAAGATCACCACA
GCACCCCCACCAGTGGACGTTGACGAGGAGATTCCGAAACGAGGCGCTGC
GCCGGTCACCCGAGACCTCAACCGAGCAAGAAGTGCAGCAGGCGTGCATT
TTGCCGCTGGTGCTGAGGCACTGTCAAAAGCATCGGTAGCATATCGGCGC
GGTAAATCAGATCGGTTGATGGGAGGTGCGGCTGCCTACTACTCCGCAGT
AGGACGAGACCACTTGGAACGCGCCAAACGCAATGCCGCTGCTGCCGCCG
ATGCCCTGGTAGACACACAGTCTACATGGAATTCGCTGGATCTGCATGGT
GTATCTGTACAGGATGCAGTGCGGATCGCTAGCGAGCGGGTGTCTGAATG
GTGGGACTCTCTAGGCGATGCCAAATATTCGCGTGGAAGTGGAGCTAGAG
ATCCTATTCAGGGTGGCTATCGCATTGTAACTGGGCTTGGACGGCATAGT
CATGATGGCACTTCACGCTTGGGCCCGGCTGTTGCAAAGATGCTGGCCCG
AGAAGGCTGGAGGGTGGAGATTGGTGCCGGAGTTTTGACCGTCGTTGGAG
TTGTCCGACGTCGCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:704869..706585+

>CAN33_22890-T1 ID=CAN33_22890-T1|Name=CAN33_22890-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3228bp|location=Sequence derived from alignment at NKJJ01000002.1:704869..706585+ (Aspergillus niger FDAARGOS_311)
ATGGGTGACAAGGATGACGGTCCGCTACAGGACCTGGAAAAGACATACTG
CCCTCCTCTGGACCCTGCCTTACTCACAGCCATCGCCTTCGACTATGACC
TTACCGACTCTGCTCAACTTGGCCAACTGCGCGAGACTCTTGATGCACTT
CGGCTGTCAGCATGGGAACAGGAGGATTTACCCTTCGACCCCTCCGGCAC
GTCCGGTTTAGGTGCAGGACATGGTCTAGAAGCGGATGGGTCCTCTGAGC
TTAGTGAGTCCCAGGGAGACCGGTCGCGGGAGACAGATGTCACTAGCCTC
ACGTCGGGCTTCTCTTCGGTCGGTATCAGGGACCATGTCTCGTATACTAT
TGGACCGGATGGGTCTCTCCATCTATCCGGCGCGAATGAAGAGGATAAGA
TTGGCTACTTGACTGAGATGTTCCCGTCAGTTGACCGGTTTACCATCCAG
CACACGTTGAAGAAGTCTAATGGGGACATTGATCGCTCGATGGACGTCCT
TCTCAACTTGTCGTTCTTTGATGAGCAAGTACCTGATGAGGATGGGGTGG
TCACTGTCCCTAAGGGGGTGGATGGCTTTGATGACCCGGGAGCAAGCAAG
AAGCAAGCTCGTAAGCGTAAACCCAAGAACAAGAATGGCCGAAGACAAGA
GGTCCTATCATCCATGAGCTCTGAGGCTAGTTTCGAGAATACAACGAACA
AGTGGGATGCTGCTGGAAAGGACGTTGAGTTCATTCATGCGCGAACCTCG
GCGATACTGAAAAAGGAGACCGTCCGCTCAACTTATCACGCTAATGGGGC
CTCACTTCCTGCTACAATCAGGGCTCTTGCCGATACACACGCCCCTAAGA
AGCAGATCGATGAGGATCCGGTGACGGTTACGCAAGTGGCCGAGCTTACG
CAAGAATTTCCGTCGGTGCCACCGCTCACATTTGCCGGCTTGCTTAAAAT
CACGAGAAGTTCTGTATCAGCCGCCAGTGAGCTCGCGGCGGCTATGCTGA
CAAGCCCCGTGGCTCCGTCCATAACTGAGATAATCAAGATCACCACAGCA
CCCCCACCAGTGGACGTTGACGAGGAGATTCCGAAACGAGGCGCTGCGCC
GGTCACCCGAGACCTCAACCGAGCAAGAAGTGCAGCAGGCGTGCATTTTG
CCGCTGGTGCTGAGGCACTGTCAAAAGCATCGGTAGCATATCGGCGCGGT
AAATCAGATCGGTTGATGGGAGGTGCGGCTGCCTACTACTCCGCAGTAGG
ACGAGACCACTTGGAACGCGCCAAACGCAATGCCGCTGCTGCCGCCGATG
CCCTGGTAGACACACAGTCTACATGGAATTCGCTGGATCTGCATGGTGTA
TCTGTACAGGATGCAGTGCGGATCGCTAGCGAGCGGGTGTCTGAATGGTG
GGACTCTCTAGGCGATGCCAAATATTCGCGTGGAAGTGGAGCTAGAGATC
CTATTCAGGGTGGCTATCGCATTGTAACTGGGCTTGGACGGCATAGTCAT
GATGGCACTTCACGCTTGGGCCCGGCTGTTGCAAAGATGCTGGCCCGAGA
AGGCTGGAGGGTGGAGATTGGTGCCGGAGTTTTGACCGTCGTTGGAGTTG
TCCGACGTCGCTGAATGGGTGACAAGGATGACGGTCCGCTACAGGACCTG
GAAAAGACATACTGCCCTCCTCTGGACCCTGCCTTACTCACAGCCATCGC
CTTCGACTATGACCTTACCGACTCTGCTCAACTTGGCCAACTGCGCGAGA
CTCTTGATGCACTTCGGCTGTCAGCATGGGAACAGGAGGATTTACCCTTC
GACCCCTCCGGCACGTCCGGTTTAGGTGCAGGACATGGTCTAGAAGCGGA
TGGGTCCTCTGAGCTTAGTGAGTCCCAGGGAGACCGGTCGCGGGAGACAG
ATGTCACTAGCCTCACGTCGGGCTTCTCTTCGGTCGGTATCAGGGACCAT
GTCTCGTATACTATTGGACCGGATGGGTCTCTCCATCTATCCGGCGCGAA
TGAAGAGGATAAGATTGGCTACTTGACTGAGATGTTCCCGTCAGTTGACC
GGTTTACCATCCAGCACACGTTGAAGAAGTCTAATGGGGACATTGATCGC
TCGATGGACGTCCTTCTCAACTTGTCGTTCTTTGATGAGCAAGTACCTGA
TGAGGATGGGGTGGTCACTGTCCCTAAGGGGGTGGATGGCTTTGATGACC
CGGGAGCAAGCAAGAAGCAAGCTCGTAAGCGTAAACCCAAGAACAAGAAT
GGCCGAAGACAAGAGGTCCTATCATCCATGAGCTCTGAGGCTAGTTTCGA
GAATACAACGAACAAGTGGGATGCTGCTGGAAAGGACGTTGAGTTCATTC
ATGCGCGAACCTCGGCGATACTGAAAAAGGAGACCGTCCGCTCAACTTAT
CACGCTAATGGGGCCTCACTTCCTGCTACAATCAGGGCTCTTGCCGATAC
ACACGCCCCTAAGAAGCAGATCGATGAGGATCCGGTGACGGTTACGCAAG
TGGCCGAGCTTACGCAAGAATTTCCGTCGGTGCCACCGCTCACATTTGCC
GGCTTGCTTAAAATCACGAGAAGTTCTGTATCAGCCGCCAGTGAGCTCGC
GGCGGCTATGCTGACAAGCCCCGTGGCTCCGTCCATAACTGAGATAATCA
AGATCACCACAGCACCCCCACCAGTGGACGTTGACGAGGAGATTCCGAAA
CGAGGCGCTGCGCCGGTCACCCGAGACCTCAACCGAGCAAGAAGTGCAGC
AGGCGTGCATTTTGCCGCTGGTGCTGAGGCACTGTCAAAAGCATCGGTAG
CATATCGGCGCGGTAAATCAGATCGGTTGATGGGAGGTGCGGCTGCCTAC
TACTCCGCAGTAGGACGAGACCACTTGGAACGCGCCAAACGCAATGCCGC
TGCTGCCGCCGATGCCCTGGTAGACACACAGTCTACATGGAATTCGCTGG
ATCTGCATGGTGTATCTGTACAGGATGCAGTGCGGATCGCTAGCGAGCGG
GTGTCTGAATGGTGGGACTCTCTAGGCGATGCCAAATATTCGCGTGGAAG
TGGAGCTAGAGATCCTATTCAGGGTGGCTATCGCATTGTAACTGGGCTTG
GACGGCATAGTCATGATGGCACTTCACGCTTGGGCCCGGCTGTTGCAAAG
ATGCTGGCCCGAGAAGGCTGGAGGGTGGAGATTGGTGCCGGAGTTTTGAC
CGTCGTTGGAGTTGTCCGACGTCGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_22890CAN33_22890Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22890-T1.exon1CAN33_22890-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_22890-T1.exon2CAN33_22890-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22890-T1.cdsCAN33_22890-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_22890-T1CAN33_22890-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036063
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR003892
DBxrefInterPro:IPR013899
DBxrefInterPro:IPR002625
DBxrefPFAM:PF08590
DBxrefPFAM:PF02845
ProductSmr domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:704869..706585 +
Powered by Drupal