CAN33_23500-T1, CAN33_23500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_23500-T1
Unique Name	CAN33_23500-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1100430..1102049-
coding sequence from alignment at NKJJ01000002.1:1100430..1102049-

mRNA from alignment at NKJJ01000002.1:1100430..1102049-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_23500-T1 ID=CAN33_23500-T1|Name=CAN33_23500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1620bp|location=Sequence derived from alignment at NKJJ01000002.1:1100430..1102049- (Aspergillus niger FDAARGOS_311)
ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA
GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA
AGCAAGTCAACTGCACTTACCTAAAACCTGCGCGGAGAAGGGGACCTAAG
GTACGAAGGTATATCGGGGGTCAGGGACCGGAACACGCGACAACCGGTCC
TTTGATCACTCCACATGTCGATCCTCGTGACGAGGGGATAGCCCGTGTGG
AGGTAGAGCAACATGTCTCGAGTACTATCCAAACAGAAGAACTGGTCTCG
GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGCGTGTGGCCGGTTGTCAA
TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA
CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG
CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG
GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC
TGCATGTATATCATGCCAAGATCAACAAGAGGGACTCGGCCATGCGGTTC
ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT
GGGTGAGCAAGAGACTGCGCTCGGTGCAGATATCGTTGCTAATAAAGAGA
TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGTAGAAATTCCTCTTCGCA
AGTCCACTGTAGCTCATACTGACATTGCTTAGGGGCTATGCTATGCATCT
CGGTCTCGAACCATCATATACCAGCCCTATTCGCCTACCCGATGAGGTCG
ATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTC
TTTGCCACGTTCGATGGGGTTTCGTCCGGAAGGAGCACAAATTCCAGAGA
TAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTAT
CGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCAGAT
TATTGCATCACTAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCT
GTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTA
GATTCCCGGCAGTGGTTAGCCGTGACCTTTTGATGTCGCTACAAGGCTTT
ACTGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGGTTTGTTTTCGCGA
TTCTTGGGGCTGCCAGGTACTAATCGAATTCCGAGTTTAGCTGTTGAAGT
GTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCG
GTTTCAACGTACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGC
CTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGT
CGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGC
TTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACGATCAAGATAA
TGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATT
CGCGATGGGCTCTCTATTAA

Coding sequence (CDS) from alignment at NKJJ01000002.1:1100430..1102049-

>CAN33_23500-T1 ID=CAN33_23500-T1|Name=CAN33_23500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4545bp|location=Sequence derived from alignment at NKJJ01000002.1:1100430..1102049- (Aspergillus niger FDAARGOS_311)
CTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCT
CACGCCATCGGTTTCAACGTACTCTGCCTTCCAGTTAGGGCCACACGACT
TTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTC
ATGTTGAAGTCGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGC
CCCCGCGCGCTTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACG
ATCAAGATAATGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAG
TACGTTGATTCGCGATGGGCTCTCTATTAAGGGCTATGCTATGCATCTCG
GTCTCGAACCATCATATACCAGCCCTATTCGCCTACCCGATGAGGTCGAT
GTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTCTT
TGCCACGTTCGATGGGGTTTCGTCCGGAAGGAGCACAAATTCCAGAGATA
AGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTATCG
ATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCAGATTA
TTGCATCACTAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCTGT
CTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTAGA
TTCCCGGCAGTGGTTAGCCGTGACCTTTTGATGTCGCTACAAGGCTTTAC
TGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGATGCGCCATCGACTCA
CAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAGGTCAAGTGCAGCGGC
GCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAAGCAAGTCAACTGCAC
TTACCTAAAACCTGCGCGGAGAAGGGGACCTAAGGTACGAAGGTATATCG
GGGGTCAGGGACCGGAACACGCGACAACCGGTCCTTTGATCACTCCACAT
GTCGATCCTCGTGACGAGGGGATAGCCCGTGTGGAGGTAGAGCAACATGT
CTCGAGTACTATCCAAACAGAAGAACTGGTCTCGGTAGTGCGCTTCTACC
AGCAGGCGTCTTATAGCGTGTGGCCGGTTGTCAATGCAGAAGTGCTGTTG
AACAAGCTTGAGCATGGCACGCCAGATATTGGAACCTTGTGTCTGGCCAT
GGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGCTTGCTCCGACAACTG
TTGATAGCACGATGATGGCGGCGGAGTGTATGAGGATGCGTGAAGCGCAC
CTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCTGCATGTATATCATGC
CAAGATCAACAAGAGGGACTCGGCCATGCGGTTCATACGAGAGGCTGTGT
ATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTGGGTGAGCAAGAGACT
GCGCTCGGTGCAGATATCGTTGCTAATAAAGAGATTGTATTCCTCTTGCT
CTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGC
GGATACTGTCCTGCTCACGCCATCGGTTTCAACGTACTCTGCCTTCCAGT
TAGGGCCACACGACTTTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTC
CTGGAGCAAGATCTCATGTTGAAGTCGATACTGCATAGTAAGACGGCTGA
GGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACTTGAACTATGACCCTT
GGTCATTCGATGACGATCAAGATAATGCTTACACTACCGAAGAGCATGTG
GACTCTCCTGAGCAGTACGTTGATTCGCGATGGGCTCTCTATTAAGGGCT
ATGCTATGCATCTCGGTCTCGAACCATCATATACCAGCCCTATTCGCCTA
CCCGATGAGGTCGATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGA
GCTTGGCAGACTCTTTGCCACGTTCGATGGGGTTTCGTCCGGAAGGAGCA
CAAATTCCAGAGATAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACG
GAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCAC
CCGCATTGCAGATTATTGCATCACTAAAGAATGGATGAGGACTATCATCT
GGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAG
CTCATGACATTTAGATTCCCGGCAGTGGTTAGCCGTGACCTTTTGATGTC
GCTACAAGGCTTTACTGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGA
TGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAG
GTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAA
GCAAGTCAACTGCACTTACCTAAAACCTGCGCGGAGAAGGGGACCTAAGG
TACGAAGGTATATCGGGGGTCAGGGACCGGAACACGCGACAACCGGTCCT
TTGATCACTCCACATGTCGATCCTCGTGACGAGGGGATAGCCCGTGTGGA
GGTAGAGCAACATGTCTCGAGTACTATCCAAACAGAAGAACTGGTCTCGG
TAGTGCGCTTCTACCAGCAGGCGTCTTATAGCGTGTGGCCGGTTGTCAAT
GCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAAC
CTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGC
TTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAGG
ATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCT
GCATGTATATCATGCCAAGATCAACAAGAGGGACTCGGCCATGCGGTTCA
TACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTG
GGTGAGCAAGAGACTGCGCTCGGTGCAGATATCGTTGCTAATAAAGAGAT
TGTATTCCTCTTGCTCTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGAT
CGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCGGTTTCAACGT
ACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGCCTTATACCAG
AAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGTCGATACTGCA
TAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACT
TGAACTATGACCCTTGGTCATTCGATGACGATCAAGATAATGCTTACACT
ACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATTCGCGATGGGC
TCTCTATTAAGGGCTATGCTATGCATCTCGGTCTCGAACCATCATATACC
AGCCCTATTCGCCTACCCGATGAGGTCGATGTGGGAGATAGCGCGGATGC
GAAAGGCCTGCTTGAGCTTGGCAGACTCTTTGCCACGTTCGATGGGGTTT
CGTCCGGAAGGAGCACAAATTCCAGAGATAAGCTAGTAATGACTGCGGAT
AGTCTTGCGAAGACGGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGG
CGACCGACCTTCCACCCGCATTGCAGATTATTGCATCACTAAAGAATGGA
TGAGGACTATCATCTGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCG
AAATCCGGTGCCCAGCTCATGACATTTAGATTCCCGGCAGTGGTTAGCCG
TGACCTTTTGATGTCGCTACAAGGCTTTACTGAGTCTGACTTGCTGCCTT
TGGGGCGCGACCAGATGCGCCATCGACTCACAAAGCGTGCATGCGATGAG
TGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTG
CCAGAGTGCCCAAAAGCAAGTCAACTGCACTTACCTAAAACCTGCGCGGA
GAAGGGGACCTAAGGTACGAAGGTATATCGGGGGTCAGGGACCGGAACAC
GCGACAACCGGTCCTTTGATCACTCCACATGTCGATCCTCGTGACGAGGG
GATAGCCCGTGTGGAGGTAGAGCAACATGTCTCGAGTACTATCCAAACAG
AAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCAGGCGTCTTATAGCGTG
TGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCAC
GCCAGATATTGGAACCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCA
TGGCACAGCTGCAGCTTGCTCCGACAACTGTTGATAGCACGATGATGGCG
GCGGAGTGTATGAGGATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTT
GGTCTCGTTCTTCCTGCATGTATATCATGCCAAGATCAACAAGAGGGACT
CGGCCATGCGGTTCATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAG
CTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGCTCGGTGCAGATATCGT
TGCTAATAAAGAGATTGTATTCCTCTTGCTCTGGGTTTCTGAAAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_23500	CAN33_23500	Aspergillus niger FDAARGOS_311	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_23500-T1	CAN33_23500-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_23500-T1.cds	CAN33_23500-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_23500-T1.exon3	CAN33_23500-T1.exon3	Aspergillus niger FDAARGOS_311	exon
CAN33_23500-T1.exon2	CAN33_23500-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_23500-T1.exon1	CAN33_23500-T1.exon1	Aspergillus niger FDAARGOS_311	exon

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
Product	Fungal Zn(2)-Cys(6) binuclear cluster domain family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000002.1	supercontig	NKJJ01000002.1:1100430..1102049 -

Main menu

You are here

CAN33_23500-T1, CAN33_23500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Main menu

User login

You are here

CAN33_23500-T1, CAN33_23500-T1 (mRNA) Aspergillus niger FDAARGOS_311