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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1137553..1138574- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_23550-T1 ID=CAN33_23550-T1|Name=CAN33_23550-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1022bp|location=Sequence derived from alignment at NKJJ01000002.1:1137553..1138574- (Aspergillus niger FDAARGOS_311)
ATGTCCTTCCCATACAAGCACATCCTCGTCCTCGGCGCCACCGCCGGCAT
CGGCCGAGCTCTCGCATCGCGCTTCGTGCAATCCGAAGTCAAAGTCACAG
TCGTCGGACGACGCAAAGAGCGCTTGGATGAATTCTTGCAAGAACACGGA
GAAGACAAGGCCAATGCGGTGCAATTCGATATTAGTGACTTGGATAAGAT
TCCTGGGTTTGCTGCTGAGTAAGTTTCGCTCCCTTGATATACTATGCAGT
ACCGCATCTAGATTGAATGGATGGCTAATGAGAATATCTTCAATAGAATA
ATGACCACATACCCCACAATCGACAGCGTCTTTATGAACGCCGGCATAAT
GCTTCCTACCGACATGACCGATCCCGAAAAATTCGACCTACCCAGCTTCT
ACAAGCAAATGCACGTCAACTTCACCAGTTATGTTGCTCTGACGCATGCT
TTCTTGCCTTATCTTACCAAGGAAGGGGGCCATACGAGCTTGATTTAGTG
CGTACCTCTTCATCTCTTTCAGGTTACACTACCAGAATGCACTAAAATGT
ACTAACCATAAAACAGCACCACATCCAACCTCTCCATAGTCCCTGCGACC
TGGATGCCCGCATACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCT
CTGTCTGCGGGATCAGCTGCGTAAAAGCTCTGTGAAGATTATTGAGGTGT
CGCCGCCAGCGGTGCAATGTGAGTCTAAACCCCCAATTCTCTGCTTCTAC
TGCCGTCTCGTTCATCTAGTTGTCCTAGATATATATTTCCTATCTGACTA
ACTATCACTGCAGCCGAACTCCACGATTATATGGGCGAAGAGGGCCGTAA
AGTCGGTATGCCCCTGAAGGAATTTACGGCTGAAGCATTTCAGGGACTAC
TGGACGGAAAGGACCAAATCGTTGTGGGAAGTCTTGGGCCTGCAGAAGTG
TTCTTGGATATCGTGAATAAGCGCCGGGCTGCGACTACGCAGTTGGCGAA
GATGATGAGGGGGGAGAAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1137553..1138574- >CAN33_23550-T1 ID=CAN33_23550-T1|Name=CAN33_23550-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3120bp|location=Sequence derived from alignment at NKJJ01000002.1:1137553..1138574- (Aspergillus niger FDAARGOS_311)
CCGAACTCCACGATTATATGGGCGAAGAGGGCCGTAAAGTCGGTATGCCC
CTGAAGGAATTTACGGCTGAAGCATTTCAGGGACTACTGGACGGAAAGGA
CCAAATCGTTGTGGGAAGTCTTGGGCCTGCAGAAGTGTTCTTGGATATCG
TGAATAAGCGCCGGGCTGCGACTACGCAGTTGGCGAAGATGATGAGGGGG
GAGAAGTAGCACCACATCCAACCTCTCCATAGTCCCTGCGACCTGGATGC
CCGCATACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTG
CGGGATCAGCTGCGTAAAAGCTCTGTGAAGATTATTGAGGTGTCGCCGCC
AGCGGTGCAATAATAATGACCACATACCCCACAATCGACAGCGTCTTTAT
GAACGCCGGCATAATGCTTCCTACCGACATGACCGATCCCGAAAAATTCG
ACCTACCCAGCTTCTACAAGCAAATGCACGTCAACTTCACCAGTTATGTT
GCTCTGACGCATGCTTTCTTGCCTTATCTTACCAAGGAAGGGGGCCATAC
GAGCTTGATTTAATGTCCTTCCCATACAAGCACATCCTCGTCCTCGGCGC
CACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTCGTGCAATCCGAAG
TCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCTTGGATGAATTCTTG
CAAGAACACGGAGAAGACAAGGCCAATGCGGTGCAATTCGATATTAGTGA
CTTGGATAAGATTCCTGGGTTTGCTGCTGACCGAACTCCACGATTATATG
GGCGAAGAGGGCCGTAAAGTCGGTATGCCCCTGAAGGAATTTACGGCTGA
AGCATTTCAGGGACTACTGGACGGAAAGGACCAAATCGTTGTGGGAAGTC
TTGGGCCTGCAGAAGTGTTCTTGGATATCGTGAATAAGCGCCGGGCTGCG
ACTACGCAGTTGGCGAAGATGATGAGGGGGGAGAAGTAGCACCACATCCA
ACCTCTCCATAGTCCCTGCGACCTGGATGCCCGCATACTCTGCCTCCAAG
GCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGCTGCGTAAAAG
CTCTGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAATAATAATGAC
CACATACCCCACAATCGACAGCGTCTTTATGAACGCCGGCATAATGCTTC
CTACCGACATGACCGATCCCGAAAAATTCGACCTACCCAGCTTCTACAAG
CAAATGCACGTCAACTTCACCAGTTATGTTGCTCTGACGCATGCTTTCTT
GCCTTATCTTACCAAGGAAGGGGGCCATACGAGCTTGATTTAATGTCCTT
CCCATACAAGCACATCCTCGTCCTCGGCGCCACCGCCGGCATCGGCCGAG
CTCTCGCATCGCGCTTCGTGCAATCCGAAGTCAAAGTCACAGTCGTCGGA
CGACGCAAAGAGCGCTTGGATGAATTCTTGCAAGAACACGGAGAAGACAA
GGCCAATGCGGTGCAATTCGATATTAGTGACTTGGATAAGATTCCTGGGT
TTGCTGCTGACCGAACTCCACGATTATATGGGCGAAGAGGGCCGTAAAGT
CGGTATGCCCCTGAAGGAATTTACGGCTGAAGCATTTCAGGGACTACTGG
ACGGAAAGGACCAAATCGTTGTGGGAAGTCTTGGGCCTGCAGAAGTGTTC
TTGGATATCGTGAATAAGCGCCGGGCTGCGACTACGCAGTTGGCGAAGAT
GATGAGGGGGGAGAAGTAGCACCACATCCAACCTCTCCATAGTCCCTGCG
ACCTGGATGCCCGCATACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCAT
TCTCTGTCTGCGGGATCAGCTGCGTAAAAGCTCTGTGAAGATTATTGAGG
TGTCGCCGCCAGCGGTGCAATAATAATGACCACATACCCCACAATCGACA
GCGTCTTTATGAACGCCGGCATAATGCTTCCTACCGACATGACCGATCCC
GAAAAATTCGACCTACCCAGCTTCTACAAGCAAATGCACGTCAACTTCAC
CAGTTATGTTGCTCTGACGCATGCTTTCTTGCCTTATCTTACCAAGGAAG
GGGGCCATACGAGCTTGATTTAATGTCCTTCCCATACAAGCACATCCTCG
TCCTCGGCGCCACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTCGTG
CAATCCGAAGTCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCTTGGA
TGAATTCTTGCAAGAACACGGAGAAGACAAGGCCAATGCGGTGCAATTCG
ATATTAGTGACTTGGATAAGATTCCTGGGTTTGCTGCTGACCGAACTCCA
CGATTATATGGGCGAAGAGGGCCGTAAAGTCGGTATGCCCCTGAAGGAAT
TTACGGCTGAAGCATTTCAGGGACTACTGGACGGAAAGGACCAAATCGTT
GTGGGAAGTCTTGGGCCTGCAGAAGTGTTCTTGGATATCGTGAATAAGCG
CCGGGCTGCGACTACGCAGTTGGCGAAGATGATGAGGGGGGAGAAGTAGC
ACCACATCCAACCTCTCCATAGTCCCTGCGACCTGGATGCCCGCATACTC
TGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGC
TGCGTAAAAGCTCTGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAA
TAATAATGACCACATACCCCACAATCGACAGCGTCTTTATGAACGCCGGC
ATAATGCTTCCTACCGACATGACCGATCCCGAAAAATTCGACCTACCCAG
CTTCTACAAGCAAATGCACGTCAACTTCACCAGTTATGTTGCTCTGACGC
ATGCTTTCTTGCCTTATCTTACCAAGGAAGGGGGCCATACGAGCTTGATT
TAATGTCCTTCCCATACAAGCACATCCTCGTCCTCGGCGCCACCGCCGGC
ATCGGCCGAGCTCTCGCATCGCGCTTCGTGCAATCCGAAGTCAAAGTCAC
AGTCGTCGGACGACGCAAAGAGCGCTTGGATGAATTCTTGCAAGAACACG
GAGAAGACAAGGCCAATGCGGTGCAATTCGATATTAGTGACTTGGATAAG
ATTCCTGGGTTTGCTGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000021.7 |
| Note | antiSMASH:Cluster_10000021.8 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1137553..1138574 - |
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