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CAN33_23960-T1, CAN33_23960-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_23960-T1
Unique NameCAN33_23960-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1410770..1411573+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_23960-T1 ID=CAN33_23960-T1|Name=CAN33_23960-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=804bp|location=Sequence derived from alignment at NKJJ01000002.1:1410770..1411573+ (Aspergillus niger FDAARGOS_311)
ATGCTAGACCATTTATACCGCTTCACGCGAACCACCCCAGGCCTCGAAAA
GACCCTCCGCCTCGTCCAATCCCTCTGTGTGCTGGCCCTGCAAATACCCA
CTCTGGAAAATGAATCCATTTCGCGGTTCAACATCGCCAAGACACAGTTT
GCGTTGAGTTAGTCTCCCTCCAATAGTCCCTAATCGATTGGGAATACCCC
ACATCCATCATTTGAATCAACCAGTATTGAATAATAAACAGCGAGACGCT
TCCTCCGGTTCTTCAACTTCATCGACTGCTTCAATCGAGCATTTGCCTTG
CTGGGGAGTACCTCCTCTGCTCAAGGCAATATCATCAAGACGGTAATCGA
AATAAGTAAATGGTCCTGCTTTGGATGTTATTTCCTGTTGGAGGATTTGA
CTCTCGTATGTGCTCCCTTCCCTTCATATCCCAAGACATACAATGATACT
AAAGTGACATGCAAGTTACACGCAACATCCATCTATCCAAACCCATATAA
TGCAGCCATATTAACAGAAGCGAATAAGTTCTGGTTCTATGCGCTGGGGT
TCTCTATACTGGGAGCTGCTAATGATATACTCTTTTCTTCGGCGTCGTCT
GCGTCTAAGACGAAGGATGAGAAGAAGCAAGCACCCTCTATCGACCGCTT
CTCTCTCCTGAAGAAAATGCTCTGTGTTGATGCATGTGATATGCTCATTC
CTGGGACCTTTCTGGGATGGATTGAAATGGGCCAGTTGGGGGTGGGGATT
GGGATGGTGGTTAGTACCCTTGTTTCGGGGTGGGATATGTGGAATGCTGT
TTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1410770..1411573+

>CAN33_23960-T1 ID=CAN33_23960-T1|Name=CAN33_23960-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1980bp|location=Sequence derived from alignment at NKJJ01000002.1:1410770..1411573+ (Aspergillus niger FDAARGOS_311)
ATGCTAGACCATTTATACCGCTTCACGCGAACCACCCCAGGCCTCGAAAA
GACCCTCCGCCTCGTCCAATCCCTCTGTGTGCTGGCCCTGCAAATACCCA
CTCTGGAAAATGAATCCATTTCGCGGTTCAACATCGCCAAGACACAGTTT
GCGTTGACGAGACGCTTCCTCCGGTTCTTCAACTTCATCGACTGCTTCAA
TCGAGCATTTGCCTTGCTGGGGAGTACCTCCTCTGCTCAAGGCAATATCA
TCAAGACGGTAATCGAAATAAGTAAATGGTCCTGCTTTGGATGTTATTTC
CTGTTGGAGGATTTGACTCTCTTACACGCAACATCCATCTATCCAAACCC
ATATAATGCAGCCATATTAACAGAAGCGAATAAGTTCTGGTTCTATGCGC
TGGGGTTCTCTATACTGGGAGCTGCTAATGATATACTCTTTTCTTCGGCG
TCGTCTGCGTCTAAGACGAAGGATGAGAAGAAGCAAGCACCCTCTATCGA
CCGCTTCTCTCTCCTGAAGAAAATGCTCTGTGTTGATGCATGTGATATGC
TCATTCCTGGGACCTTTCTGGGATGGATTGAAATGGGCCAGTTGGGGGTG
GGGATTGGGATGGTGGTTAGTACCCTTGTTTCGGGGTGGGATATGTGGAA
TGCTGTTTGAATGCTAGACCATTTATACCGCTTCACGCGAACCACCCCAG
GCCTCGAAAAGACCCTCCGCCTCGTCCAATCCCTCTGTGTGCTGGCCCTG
CAAATACCCACTCTGGAAAATGAATCCATTTCGCGGTTCAACATCGCCAA
GACACAGTTTGCGTTGACGAGACGCTTCCTCCGGTTCTTCAACTTCATCG
ACTGCTTCAATCGAGCATTTGCCTTGCTGGGGAGTACCTCCTCTGCTCAA
GGCAATATCATCAAGACGGTAATCGAAATAAGTAAATGGTCCTGCTTTGG
ATGTTATTTCCTGTTGGAGGATTTGACTCTCTTACACGCAACATCCATCT
ATCCAAACCCATATAATGCAGCCATATTAACAGAAGCGAATAAGTTCTGG
TTCTATGCGCTGGGGTTCTCTATACTGGGAGCTGCTAATGATATACTCTT
TTCTTCGGCGTCGTCTGCGTCTAAGACGAAGGATGAGAAGAAGCAAGCAC
CCTCTATCGACCGCTTCTCTCTCCTGAAGAAAATGCTCTGTGTTGATGCA
TGTGATATGCTCATTCCTGGGACCTTTCTGGGATGGATTGAAATGGGCCA
GTTGGGGGTGGGGATTGGGATGGTGGTTAGTACCCTTGTTTCGGGGTGGG
ATATGTGGAATGCTGTTTGAATGCTAGACCATTTATACCGCTTCACGCGA
ACCACCCCAGGCCTCGAAAAGACCCTCCGCCTCGTCCAATCCCTCTGTGT
GCTGGCCCTGCAAATACCCACTCTGGAAAATGAATCCATTTCGCGGTTCA
ACATCGCCAAGACACAGTTTGCGTTGACGAGACGCTTCCTCCGGTTCTTC
AACTTCATCGACTGCTTCAATCGAGCATTTGCCTTGCTGGGGAGTACCTC
CTCTGCTCAAGGCAATATCATCAAGACGGTAATCGAAATAAGTAAATGGT
CCTGCTTTGGATGTTATTTCCTGTTGGAGGATTTGACTCTCTTACACGCA
ACATCCATCTATCCAAACCCATATAATGCAGCCATATTAACAGAAGCGAA
TAAGTTCTGGTTCTATGCGCTGGGGTTCTCTATACTGGGAGCTGCTAATG
ATATACTCTTTTCTTCGGCGTCGTCTGCGTCTAAGACGAAGGATGAGAAG
AAGCAAGCACCCTCTATCGACCGCTTCTCTCTCCTGAAGAAAATGCTCTG
TGTTGATGCATGTGATATGCTCATTCCTGGGACCTTTCTGGGATGGATTG
AAATGGGCCAGTTGGGGGTGGGGATTGGGATGGTGGTTAGTACCCTTGTT
TCGGGGTGGGATATGTGGAATGCTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005779integral component of peroxisomal membrane
Vocabulary: Biological Process
TermDefinition
GO:0016559peroxisome fission
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_23960CAN33_23960Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23960-T1.exon1CAN33_23960-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_23960-T1.exon2CAN33_23960-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_23960-T1.exon3CAN33_23960-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23960-T1.cdsCAN33_23960-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_23960-T1CAN33_23960-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.9
NoteEggNog:ENOG41
DBxrefInterPro:IPR008733
DBxrefPFAM:PF05648
ProductPeroxisomal biogenesis factor 11 (PEX11) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1410770..1411573 +
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