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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1435511..1436966- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24000-T1 ID=CAN33_24000-T1|Name=CAN33_24000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1456bp|location=Sequence derived from alignment at NKJJ01000002.1:1435511..1436966- (Aspergillus niger FDAARGOS_311)
ATGTCGCTACTGCGTTCCAACGGGGTGCCCAGCTCCTGCGAGCCATGCCG
CAAATCCAAGATTCGATGCGACCACGCCGTCCCTTGCGGCCGATGCCGGC
GCAGACGCAAGCCGGCTCTGTGCGTGTACCAACCGGCCCCGATGTCCAAA
CATCCGAACAGGACGGATCGCAGCTCCACCGACTCCATTTCGTGCGGCAG
TGGCAGCAACATTACTGCCAGTGCCAGTCTCAGCAGTGCCTGGACGAGCC
CGCTGCCTCCTCCCTCACTGGTTACTCCGCCCCTGCCCCCTGGCCATCTC
CGTGACCGCTACCTTGCCGACTCGAGTCACCGCGGCACCTCGACCCCCAG
CACCGGCGTCTTCGGGCCCACCAGCTACCTGTCTGTGCTGCGCGACGACA
TCGACGATGGCTCTTCCAGCATAGCCCTCTTTGCCAAATCCCTGCAACAA
AACACCAGCGCCATCATCGACGACAGCCAGATCCAGCTCGGTGCCGAGCT
GCTCCTCATCCTGCTCGATGATTTTGCCCTATACGAACACATGGCCACGG
CACGGTTCGATCACTGCCAAGGCGATCTATTCTGCCCACCTGCCCTGCGT
CTAATCCTGTCTTCCATCCGAACAATGCTCCACGAGGCCATCACCGAGCC
CGCCAACCCGCTCCCTTCTCTACTTACCCTCTCCCGAAGCATTTTTACCG
CCTCCTCCAAACCTTTAGTCGTAGACCCCGCCATCACCCCCACAGAATAT
TTCTCCTGTATGCCGAACCGCTGGGAGATTATAGGGCTAGTCTTTGCGGT
AATTGGCTCCAGTGCATGTCTCCTCCCGCAACACGATCTGGCTGCGTATT
CCCCCCGCACCGTCCCCCACTTGACAGAAAGGGTCTCGCAGCTGTCTGTG
TGTCAGCGAGTGAAATCTGTCTTCGCTTTTTTGACTACACCGGTGTCATT
TCTGAACAGCTGTGTTGGGTGACACTGGAACATGCTTCGCTTCTTACCCT
GCTTTATGGGGATTACGGTACCCCTTCCCTTCCCTTCCCAATTTCCTAGT
ATCCTCTTCCTAAATAGCCTCTCTCCCTATCTTACGTCCCTACCAATGCT
AACAAAGAACAGACTACCGCCCCTACAAATCACTCTCTGCACTCATAACC
CTCCTCTTCACCCTGGGCTACCACCACCGCGATACCACATCCAAACTCCC
CTTCTTCCGCGCGGAACACCGCAAGCGCCTCGTCGTCGCCACCTACGCCA
TGGACAAAGGTCTCTCCACATTTCTGGGTCGTCCACCCCGCATGATCCGT
CGGTATATCACCATTGACCCGCCACTGGACATAGCCTTCACAGATATCAT
AGCCTCGCCAGAAGTTCTCGACGCCGCAATGGCCCGCCTAGATAGCAATG
GCTGGAACGCAGAGGGGGCGTATACACGGGATCATACCCCAGAGCATGCT
TCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1435511..1436966- >CAN33_24000-T1 ID=CAN33_24000-T1|Name=CAN33_24000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2202bp|location=Sequence derived from alignment at NKJJ01000002.1:1435511..1436966- (Aspergillus niger FDAARGOS_311)
ACTACCGCCCCTACAAATCACTCTCTGCACTCATAACCCTCCTCTTCACC
CTGGGCTACCACCACCGCGATACCACATCCAAACTCCCCTTCTTCCGCGC
GGAACACCGCAAGCGCCTCGTCGTCGCCACCTACGCCATGGACAAAGGTC
TCTCCACATTTCTGGGTCGTCCACCCCGCATGATCCGTCGGTATATCACC
ATTGACCCGCCACTGGACATAGCCTTCACAGATATCATAGCCTCGCCAGA
AGTTCTCGACGCCGCAATGGCCCGCCTAGATAGCAATGGCTGGAACGCAG
AGGGGGCGTATACACGGGATCATACCCCAGAGCATGCTTCATGAATGTCG
CTACTGCGTTCCAACGGGGTGCCCAGCTCCTGCGAGCCATGCCGCAAATC
CAAGATTCGATGCGACCACGCCGTCCCTTGCGGCCGATGCCGGCGCAGAC
GCAAGCCGGCTCTGTGCGTGTACCAACCGGCCCCGATGTCCAAACATCCG
AACAGGACGGATCGCAGCTCCACCGACTCCATTTCGTGCGGCAGTGGCAG
CAACATTACTGCCAGTGCCAGTCTCAGCAGTGCCTGGACGAGCCCGCTGC
CTCCTCCCTCACTGGTTACTCCGCCCCTGCCCCCTGGCCATCTCCGTGAC
CGCTACCTTGCCGACTCGAGTCACCGCGGCACCTCGACCCCCAGCACCGG
CGTCTTCGGGCCCACCAGCTACCTGTCTGTGCTGCGCGACGACATCGACG
ATGGCTCTTCCAGCATAGCCCTCTTTGCCAAATCCCTGCAACAAAACACC
AGCGCCATCATCGACGACAGCCAGATCCAGCTCGGTGCCGAGCTGCTCCT
CATCCTGCTCGATGATTTTGCCCTATACGAACACATGGCCACGGCACGGT
TCGATCACTGCCAAGGCGATCTATTCTGCCCACCTGCCCTGCGTCTAATC
CTGTCTTCCATCCGAACAATGCTCCACGAGGCCATCACCGAGCCCGCCAA
CCCGCTCCCTTCTCTACTTACCCTCTCCCGAAGCATTTTTACCGCCTCCT
CCAAACCTTTAGTCGTAGACCCCGCCATCACCCCCACAGAATATTTCTCC
TACTACCGCCCCTACAAATCACTCTCTGCACTCATAACCCTCCTCTTCAC
CCTGGGCTACCACCACCGCGATACCACATCCAAACTCCCCTTCTTCCGCG
CGGAACACCGCAAGCGCCTCGTCGTCGCCACCTACGCCATGGACAAAGGT
CTCTCCACATTTCTGGGTCGTCCACCCCGCATGATCCGTCGGTATATCAC
CATTGACCCGCCACTGGACATAGCCTTCACAGATATCATAGCCTCGCCAG
AAGTTCTCGACGCCGCAATGGCCCGCCTAGATAGCAATGGCTGGAACGCA
GAGGGGGCGTATACACGGGATCATACCCCAGAGCATGCTTCATGAATGTC
GCTACTGCGTTCCAACGGGGTGCCCAGCTCCTGCGAGCCATGCCGCAAAT
CCAAGATTCGATGCGACCACGCCGTCCCTTGCGGCCGATGCCGGCGCAGA
CGCAAGCCGGCTCTGTGCGTGTACCAACCGGCCCCGATGTCCAAACATCC
GAACAGGACGGATCGCAGCTCCACCGACTCCATTTCGTGCGGCAGTGGCA
GCAACATTACTGCCAGTGCCAGTCTCAGCAGTGCCTGGACGAGCCCGCTG
CCTCCTCCCTCACTGGTTACTCCGCCCCTGCCCCCTGGCCATCTCCGTGA
CCGCTACCTTGCCGACTCGAGTCACCGCGGCACCTCGACCCCCAGCACCG
GCGTCTTCGGGCCCACCAGCTACCTGTCTGTGCTGCGCGACGACATCGAC
GATGGCTCTTCCAGCATAGCCCTCTTTGCCAAATCCCTGCAACAAAACAC
CAGCGCCATCATCGACGACAGCCAGATCCAGCTCGGTGCCGAGCTGCTCC
TCATCCTGCTCGATGATTTTGCCCTATACGAACACATGGCCACGGCACGG
TTCGATCACTGCCAAGGCGATCTATTCTGCCCACCTGCCCTGCGTCTAAT
CCTGTCTTCCATCCGAACAATGCTCCACGAGGCCATCACCGAGCCCGCCA
ACCCGCTCCCTTCTCTACTTACCCTCTCCCGAAGCATTTTTACCGCCTCC
TCCAAACCTTTAGTCGTAGACCCCGCCATCACCCCCACAGAATATTTCTC
CT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000021.10 |
| Note | antiSMASH:Cluster_10000021.9 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1435511..1436966 - |
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